FFCP PHASE1:Hg19::chr12:133423989..133423993,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55743 | |EntrezGene=55743 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20455 | |HGNC=20455 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=394bp_to_ENST00000545046_5end | |association_with_transcript=394bp_to_ENST00000545046_5end | ||
|cluster_id=chr12:133423989..133423993,- | |||
|coexpression_cluster_id=C141 | |||
|description=CAGE_peak_9_at_CHFR_5end | |description=CAGE_peak_9_at_CHFR_5end | ||
|id=chr12:133423989..133423993,- | |id=chr12:133423989..133423993,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!5.98e-34!4;UBERON:0005058!5.98e-34!4;UBERON:0009113!5.98e-34!4;UBERON:0003295!5.98e-34!4;UBERON:0005562!5.98e-34!4;UBERON:0000974!2.78e-30!10;UBERON:0003351!4.86e-23!6;UBERON:0004177!6.48e-20!7;UBERON:0000341!1.27e-17!2;UBERON:0003408!2.84e-14!10;UBERON:0001042!2.84e-14!10;UBERON:0009145!2.84e-14!10;UBERON:0006562!4.52e-13!11;UBERON:0009722!4.52e-13!11;UBERON:0007690!4.52e-13!11;UBERON:0008814!7.41e-10!15;UBERON:0001557!5.54e-08!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.55e-98;2!UBERON:0005058;1.55e-98;2!UBERON:0009113;1.55e-98;2!UBERON:0004177;2.71e-40;5!UBERON:0005057;2.71e-40;5!UBERON:0000077;2.14e-08;27!UBERON:0002405;2.14e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.14e-50,4;UBERON:0005058,5.14e-50,4;UBERON:0009113,5.14e-50,4;UBERON:0003295,5.14e-50,4;UBERON:0005562,5.14e-50,4;UBERON:0003351,8.35e-34,6;UBERON:0004177,3.65e-29,7;UBERON:0005057,3.65e-29,7;UBERON:0000974,8.54e-21,10;UBERON:0003408,8.54e-21,10;UBERON:0001042,8.54e-21,10;UBERON:0009145,8.54e-21,10;UBERON:0006562,5.14e-19,11;UBERON:0009722,5.14e-19,11;UBERON:0007690,5.14e-19,11;UBERON:0008814,4.55e-12,18;UBERON:0001557,1.72e-11,19;UBERON:0004807,3.92e-08,28;UBERON:0000077,6.91e-08,29 | |||
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|short_description=p9@CHFR | |short_description=p9@CHFR | ||
}} | }} |
Latest revision as of 11:45, 17 September 2015
Short description: | p9@CHFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CHFR_5end |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | 394bp_to_ENST00000545046_5end |
EntrezGene: | CHFR |
HGNC: | 20455 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 5.14e-50 | 4 |
hemolymphoid system gland | 5.14e-50 | 4 |
thymic region | 5.14e-50 | 4 |
pharyngeal gland | 5.14e-50 | 4 |
thymus primordium | 5.14e-50 | 4 |
pharyngeal epithelium | 8.35e-34 | 6 |
hemopoietic organ | 3.65e-29 | 7 |
immune organ | 3.65e-29 | 7 |
neck | 8.54e-21 | 10 |
gland of gut | 8.54e-21 | 10 |
chordate pharynx | 8.54e-21 | 10 |
pharyngeal region of foregut | 8.54e-21 | 10 |
pharynx | 5.14e-19 | 11 |
entire pharyngeal arch endoderm | 5.14e-19 | 11 |
early pharyngeal endoderm | 5.14e-19 | 11 |
pharyngeal arch system | 4.55e-12 | 18 |
upper respiratory tract | 1.72e-11 | 19 |
respiratory system epithelium | 3.92e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 6.91e-08 | 29 |