FFCP PHASE1:Hg19::chr12:20425310..20425314,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:20425310..20425314,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr12:20425310..20425314,+ | |description=CAGE_peak_at_chr12:20425310..20425314,+ | ||
|id=chr12:20425310..20425314,+ | |id=chr12:20425310..20425314,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;6.62e-41;1!UBERON:0005062;3.79e-11;4!UBERON:0007284;3.79e-11;4 | |||
|ontology_enrichment_disease=DOID:114!7.33e-41!2;DOID:178!2.82e-21!1;DOID:326!2.82e-21!1;DOID:3978!2.82e-21!1;DOID:3394!2.82e-21!1;DOID:5844!2.82e-21!1;DOID:1287!5.17e-21!4 | |||
|ontology_enrichment_disease_v019=DOID:114;2.86e-79;2!DOID:178;1.81e-40;1!DOID:326;1.81e-40;1!DOID:3978;1.81e-40;1!DOID:3394;1.81e-40;1!DOID:5844;1.81e-40;1!DOID:1287;2.45e-40;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.49e-79,2;DOID:178,2.21e-40,1;DOID:326,2.21e-40,1;DOID:3978,2.21e-40,1;DOID:3394,2.21e-40,1;DOID:5844,2.21e-40,1;DOID:1287,2.71e-40,4 | |||
|ontology_enrichment_uberon=UBERON:0004151!6.68e-60!3;UBERON:0002081!3.01e-40!2;UBERON:0007100!7.54e-36!27;UBERON:0003978!2.38e-27!3;UBERON:0009751!2.38e-27!3;UBERON:0000946!2.38e-27!3;UBERON:0002523!2.38e-27!3;UBERON:0005983!2.38e-27!3;UBERON:0002165!2.38e-27!3;UBERON:0002062!2.38e-27!3;UBERON:0007280!2.38e-27!3;UBERON:0002084!1.53e-21!1;UBERON:0002082!1.53e-21!1;UBERON:0004706!1.53e-21!1;UBERON:0002146!3.45e-21!1;UBERON:0005623!3.45e-21!1;UBERON:0002134!4.22e-21!1;UBERON:0005208!4.22e-21!1;UBERON:0005946!4.22e-21!1;UBERON:0005965!4.22e-21!1;UBERON:0002078!4.22e-21!1;UBERON:0002079!5.16e-21!1;UBERON:0003103!4.14e-18!69;UBERON:0007023!8.29e-17!115;UBERON:0000948!1.19e-13!24;UBERON:0005498!1.19e-13!24;UBERON:0004140!1.19e-13!24;UBERON:0009881!1.19e-13!24;UBERON:0004141!1.19e-13!24;UBERON:0003084!1.19e-13!24;UBERON:0007005!1.19e-13!24;UBERON:0004139!1.19e-13!24;UBERON:0004291!1.19e-13!24;UBERON:0002133!3.02e-11!2;UBERON:0003127!4.52e-11!2;UBERON:0001009!2.03e-08!113;UBERON:0002300!4.52e-08!3;UBERON:0004145!6.34e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;6.62e-41;1!UBERON:0002082;6.62e-41;1!UBERON:0002146;3.30e-40;1!UBERON:0005623;3.30e-40;1!UBERON:0007100;6.36e-40;25!UBERON:0004151;1.22e-14;3!UBERON:0003978;2.09e-14;3!UBERON:0000946;2.09e-14;3!UBERON:0000948;3.15e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,6.62e-41,1;UBERON:0002082,6.62e-41,1;UBERON:0010226,6.62e-41,1;UBERON:0002146,3.30e-40,1;UBERON:0005623,3.30e-40,1;UBERON:0007100,4.92e-37,27;UBERON:0003103,3.48e-15,68;UBERON:0004151,1.22e-14,3;UBERON:0003978,2.09e-14,3;UBERON:0009751,2.09e-14,3;UBERON:0000946,2.09e-14,3;UBERON:0002523,2.09e-14,3;UBERON:0005983,2.09e-14,3;UBERON:0002165,2.09e-14,3;UBERON:0002062,2.09e-14,3;UBERON:0007280,2.09e-14,3;UBERON:0001009,1.80e-09,112;UBERON:0007023,2.58e-09,114;UBERON:0000948,1.27e-07,24;UBERON:0005498,1.27e-07,24;UBERON:0004140,1.27e-07,24;UBERON:0009881,1.27e-07,24;UBERON:0004141,1.27e-07,24;UBERON:0003084,1.27e-07,24;UBERON:0007005,1.27e-07,24;UBERON:0004139,1.27e-07,24;UBERON:0004291,1.27e-07,24;UBERON:0004797,6.39e-07,7 | |||
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|short_description=p@chr12:20425310..20425314,+ | |short_description=p@chr12:20425310..20425314,+ | ||
}} | }} |
Latest revision as of 07:25, 24 July 2015
Short description: | p@chr12:20425310..20425314, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:20425310..20425314, + |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 6.62e-41 | 1 |
cardiac ventricle | 6.62e-41 | 1 |
future cardiac ventricle | 6.62e-41 | 1 |
pulmonary valve | 3.30e-40 | 1 |
semi-lunar valve | 3.30e-40 | 1 |
primary circulatory organ | 4.92e-37 | 27 |
compound organ | 3.48e-15 | 68 |
cardiac chamber | 1.22e-14 | 3 |
valve | 2.09e-14 | 3 |
cardiac mesenchyme | 2.09e-14 | 3 |
cardial valve | 2.09e-14 | 3 |
tunica intima | 2.09e-14 | 3 |
heart layer | 2.09e-14 | 3 |
endocardium | 2.09e-14 | 3 |
endocardial cushion | 2.09e-14 | 3 |
presumptive endocardium | 2.09e-14 | 3 |
circulatory system | 1.80e-09 | 112 |
adult organism | 2.58e-09 | 114 |
heart | 1.27e-07 | 24 |
primitive heart tube | 1.27e-07 | 24 |
primary heart field | 1.27e-07 | 24 |
anterior lateral plate mesoderm | 1.27e-07 | 24 |
heart tube | 1.27e-07 | 24 |
heart primordium | 1.27e-07 | 24 |
cardiac mesoderm | 1.27e-07 | 24 |
cardiogenic plate | 1.27e-07 | 24 |
heart rudiment | 1.27e-07 | 24 |
blood vessel layer | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.49e-79 | 2 |
vascular disease | 2.21e-40 | 1 |
ischemia | 2.21e-40 | 1 |
extrinsic cardiomyopathy | 2.21e-40 | 1 |
myocardial ischemia | 2.21e-40 | 1 |
myocardial infarction | 2.21e-40 | 1 |
cardiovascular system disease | 2.71e-40 | 4 |