FFCP PHASE1:Hg19::chr12:28116055..28116080,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:28116055..28116080,+ | |||
|coexpression_cluster_id=C812 | |||
|description=CAGE_peak_at_chr12:28116055..28116080,+ | |description=CAGE_peak_at_chr12:28116055..28116080,+ | ||
|id=chr12:28116055..28116080,+ | |id=chr12:28116055..28116080,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.24e-12!43;CL:0000223!6.66e-11!59;CL:0000244!3.23e-10!4;CL:0000731!3.23e-10!4;CL:0000066!8.99e-10!254;CL:0002251!7.69e-09!21;CL:0002621!2.41e-08!3;CL:0002159!2.70e-08!13;CL:0002166!3.93e-08!3 | |ontology_enrichment_celltype=CL:0002076!2.24e-12!43;CL:0000223!6.66e-11!59;CL:0000244!3.23e-10!4;CL:0000731!3.23e-10!4;CL:0000066!8.99e-10!254;CL:0002251!7.69e-09!21;CL:0002621!2.41e-08!3;CL:0002159!2.70e-08!13;CL:0002166!3.93e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002621;6.42e-22;3!CL:0000244;1.78e-16;4!CL:0000731;1.78e-16;4!CL:0002159;1.51e-12;14!CL:0002251;4.15e-12;20!CL:0002076;2.33e-11;42!CL:0000240;5.73e-11;6!CL:0000311;5.73e-11;6!CL:0000079;5.73e-11;6!CL:0000237;5.73e-11;6!CL:0002166;1.34e-10;3!CL:0002252;2.42e-08;1!CL:0002336;4.56e-08;1!CL:0002261;4.56e-08;1!CL:0002170;4.56e-08;1!CL:0000362;1.38e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,4.06e-22,3;CL:0000244,1.65e-16,4;CL:0000731,1.65e-16,4;CL:0002159,1.42e-12,14;CL:0002251,3.33e-12,20;CL:0002076,4.25e-12,42;CL:0000240,4.44e-11,6;CL:0000311,4.44e-11,6;CL:0000079,4.44e-11,6;CL:0000237,4.44e-11,6;CL:0000036,4.44e-11,6;CL:0000357,4.44e-11,6;CL:0000114,4.44e-11,6;CL:0002166,1.41e-10,3;CL:0000066,2.38e-10,253;CL:0000223,2.27e-08,58;CL:0002252,2.50e-08,1;CL:0002336,3.33e-08,1;CL:0002261,3.33e-08,1;CL:0002170,3.33e-08,1;CL:0000221,1.11e-07,72;CL:0000362,1.28e-07,9;CL:0002077,5.05e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000357;5.73e-11;6!CL:0000114;5.73e-11;6 | |||
|ontology_enrichment_disease=DOID:1749!8.45e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:0050619;4.56e-08;1!DOID:1357;4.56e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,6.68e-08,1;DOID:1357,6.68e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000365!9.26e-12!5;UBERON:0005910!1.03e-09!6;UBERON:0001949!2.41e-08!3;UBERON:0000161!8.14e-08!35;UBERON:0004119!1.16e-07!169;UBERON:0000925!1.16e-07!169;UBERON:0006595!1.16e-07!169;UBERON:0003729!2.24e-07!5;UBERON:0005911!3.50e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;6.42e-22;3!UBERON:0000486;9.90e-21;12!UBERON:0003729;9.02e-19;13!UBERON:0001828;3.10e-14;8!UBERON:0000365;2.72e-13;5!UBERON:0000344;4.96e-12;20!UBERON:0005910;3.67e-11;6!UBERON:0003929;1.06e-09;7!UBERON:0000161;4.72e-09;19!UBERON:0000166;4.72e-09;19!UBERON:0003350;1.52e-08;8!UBERON:0000165;1.92e-08;28!UBERON:0001708;3.70e-08;4!UBERON:0008895;3.70e-08;4!UBERON:0001764;4.56e-08;1!UBERON:0001825;4.56e-08;1!UBERON:0010371;1.60e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.06e-22,3;UBERON:0003729,6.81e-19,13;UBERON:0001828,2.71e-14,8;UBERON:0000365,2.56e-13,5;UBERON:0000344,4.15e-12,20;UBERON:0005910,3.49e-11,6;UBERON:0003102,1.46e-09,99;UBERON:0000161,8.54e-09,36;UBERON:0000033,1.10e-08,56;UBERON:0003350,1.28e-08,8;UBERON:0000165,3.47e-08,29;UBERON:0000930,3.47e-08,29;UBERON:0001708,3.84e-08,4;UBERON:0008895,3.84e-08,4;UBERON:0001764,6.68e-08,1;UBERON:0001825,6.68e-08,1;UBERON:0000166,8.15e-08,22;UBERON:0000153,1.04e-07,62;UBERON:0007811,1.04e-07,62;UBERON:0004119,7.71e-07,160;UBERON:0000925,7.71e-07,160;UBERON:0006595,7.71e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,2.61656431285521,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0.751190294532984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,8.45512973831587,5.73609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.36551655370028,0,1.40740561376283,1.48141512253647,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0.93733833986777,5.20744597416465,5.38745369521069,0.179117045405697,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,6.41620704970512,0.368323955743585,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,3.90036147621913,0,0,0,0,0,0,0,0,0,1.98341898433174,1.15314040419064,0.765676274967505,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21856744815642,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.987884678879706,0,0,0.192444225451024,0,0,0,1.29151611801369,5.05414427002877,0.886860307073351,5.74308500517399,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,1.02268682502155,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.494255755786011,0.313265848516366,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0,0,0,0,0,0,0.225980740780532,0,0.19871461170299,0,0,0.400794101257669,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,0,0.328370082997356,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,1.09937867375164,0,0,0,0,0,0,0,1.12482367165896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35454082023081,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,2.71330363699803,0.366857197043358,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.171488009437418,0,0.0657727735628491,0,2.78078504730173,0,0,0,0,1.29556554731173,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03302947670128,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,2.61656431285521,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0.751190294532984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,8.45512973831587,5.73609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.36551655370028,0,1.40740561376283,1.48141512253647,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0.93733833986777,5.20744597416465,5.38745369521069,0.179117045405697,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,6.41620704970512,0.368323955743585,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,3.90036147621913,0,0,0,0,0,0,0,0,0,1.98341898433174,1.15314040419064,0.765676274967505,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21856744815642,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.987884678879706,0,0,0.192444225451024,0,0,0,1.29151611801369,5.05414427002877,0.886860307073351,5.74308500517399,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,1.02268682502155,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.494255755786011,0.313265848516366,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0,0,0,0,0,0,0.225980740780532,0,0.19871461170299,0,0,0.400794101257669,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,0,0.328370082997356,0,0,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,1.09937867375164,0,0,0,0,0,0,0,1.12482367165896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35454082023081,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,2.71330363699803,0.366857197043358,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.171488009437418,0,0.0657727735628491,0,2.78078504730173,0,0,0,0,1.29556554731173,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03302947670128,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p@chr12:28116055..28116080,+ | |short_description=p@chr12:28116055..28116080,+ | ||
}} | }} |
Latest revision as of 07:55, 24 July 2015
Short description: | p@chr12:28116055..28116080, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:28116055..28116080, + |
Coexpression cluster: | C812_Prostate_Urothelial_Mallassezderived_Sebocyte_Keratinocyte_Gingival_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 4.06e-22 | 3 |
transitional epithelial cell | 1.65e-16 | 4 |
urothelial cell | 1.65e-16 | 4 |
general ecto-epithelial cell | 1.42e-12 | 14 |
epithelial cell of alimentary canal | 3.33e-12 | 20 |
endo-epithelial cell | 4.25e-12 | 42 |
stratified squamous epithelial cell | 4.44e-11 | 6 |
keratin accumulating cell | 4.44e-11 | 6 |
stratified epithelial cell | 4.44e-11 | 6 |
keratinizing barrier epithelial cell | 4.44e-11 | 6 |
epithelial fate stem cell | 4.44e-11 | 6 |
stratified epithelial stem cell | 4.44e-11 | 6 |
surface ectodermal cell | 4.44e-11 | 6 |
epithelial cell of Malassez | 1.41e-10 | 3 |
epithelial cell | 2.38e-10 | 253 |
endodermal cell | 2.27e-08 | 58 |
epithelial cell of esophagus | 2.50e-08 | 1 |
buccal mucosa cell | 3.33e-08 | 1 |
endothelial cell of viscerocranial mucosa | 3.33e-08 | 1 |
keratinized cell of the oral mucosa | 3.33e-08 | 1 |
ectodermal cell | 1.11e-07 | 72 |
epidermal cell | 1.28e-07 | 9 |
ecto-epithelial cell | 5.05e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 4.06e-22 | 3 |
mouth mucosa | 6.81e-19 | 13 |
gingiva | 2.71e-14 | 8 |
urothelium | 2.56e-13 | 5 |
mucosa | 4.15e-12 | 20 |
transitional epithelium | 3.49e-11 | 6 |
surface structure | 1.46e-09 | 99 |
orifice | 8.54e-09 | 36 |
head | 1.10e-08 | 56 |
epithelium of mucosa | 1.28e-08 | 8 |
mouth | 3.47e-08 | 29 |
stomodeum | 3.47e-08 | 29 |
jaw skeleton | 3.84e-08 | 4 |
splanchnocranium | 3.84e-08 | 4 |
maxillary sinus | 6.68e-08 | 1 |
paranasal sinus | 6.68e-08 | 1 |
oral opening | 8.15e-08 | 22 |
anterior region of body | 1.04e-07 | 62 |
craniocervical region | 1.04e-07 | 62 |
endoderm-derived structure | 7.71e-07 | 160 |
endoderm | 7.71e-07 | 160 |
presumptive endoderm | 7.71e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 6.68e-08 | 1 |
maxillary sinus cancer | 6.68e-08 | 1 |