FFCP PHASE1:Hg19::chr12:52911499..52911548,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3852 | |EntrezGene=3852 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6442 | |HGNC=6442 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=123bp_to_ENST00000549511_5end | |association_with_transcript=123bp_to_ENST00000549511_5end | ||
|cluster_id=chr12:52911499..52911548,- | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_6_at_KRT5_5end | |description=CAGE_peak_6_at_KRT5_5end | ||
|id=chr12:52911499..52911548,- | |id=chr12:52911499..52911548,- | ||
|ontology_enrichment_celltype=CL:0002076!2.11e-29!43;CL:0000223!1.01e-20!59;CL:0000066!7.15e-19!254;CL:0002251!2.03e-16!21;CL:0002159!3.34e-16!13;CL:0002368!5.57e-16!13;CL:0000622!9.45e-12!5;CL:0000076!2.91e-11!62;CL:0000154!1.08e-09!6;CL:0000244!2.64e-09!4;CL:0000731!2.64e-09!4;CL:0002202!4.12e-09!9;CL:0002632!4.12e-09!9;CL:0002077!1.54e-08!33;CL:0002328!6.09e-08!3;CL:0000068!6.37e-08!3;CL:0000069!6.37e-08!3;CL:0000307!6.37e-08!3;CL:0000377!6.37e-08!3;CL:0002623!1.15e-07!3;CL:0002166!2.71e-07!3;CL:0000362!3.14e-07!8;CL:0002621!3.55e-07!3;CL:0000349!6.33e-07!3;CL:0002577!6.33e-07!3 | |ontology_enrichment_celltype=CL:0002076!2.11e-29!43;CL:0000223!1.01e-20!59;CL:0000066!7.15e-19!254;CL:0002251!2.03e-16!21;CL:0002159!3.34e-16!13;CL:0002368!5.57e-16!13;CL:0000622!9.45e-12!5;CL:0000076!2.91e-11!62;CL:0000154!1.08e-09!6;CL:0000244!2.64e-09!4;CL:0000731!2.64e-09!4;CL:0002202!4.12e-09!9;CL:0002632!4.12e-09!9;CL:0002077!1.54e-08!33;CL:0002328!6.09e-08!3;CL:0000068!6.37e-08!3;CL:0000069!6.37e-08!3;CL:0000307!6.37e-08!3;CL:0000377!6.37e-08!3;CL:0002623!1.15e-07!3;CL:0002166!2.71e-07!3;CL:0000362!3.14e-07!8;CL:0002621!3.55e-07!3;CL:0000349!6.33e-07!3;CL:0002577!6.33e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002368;7.31e-24;13!CL:0002076;1.07e-22;42!CL:0002159;2.65e-22;14!CL:0000622;7.27e-17;5!CL:0000154;5.44e-14;6!CL:0002202;1.89e-13;9!CL:0002632;1.89e-13;9!CL:0000244;3.37e-13;4!CL:0000731;3.37e-13;4!CL:0002251;1.02e-11;20!CL:0002077;2.40e-11;34!CL:0002328;3.58e-11;3!CL:0000307;3.89e-11;3!CL:0002623;9.76e-11;3!CL:0002166;3.35e-10;3!CL:0002621;4.81e-10;3!CL:0002577;1.31e-09;3!CL:0000240;2.31e-09;6!CL:0000311;2.31e-09;6!CL:0000079;2.31e-09;6!CL:0000237;2.31e-09;6!CL:0000362;2.42e-09;9!CL:0000150;3.42e-09;9!CL:0000575;3.17e-08;2!CL:0002327;7.45e-08;4!CL:0000317;7.85e-08;2!CL:1000448;7.85e-08;2!CL:0002308;7.85e-08;2!CL:0002140;7.85e-08;2!CL:0000312;9.59e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.98e-29,42;CL:0002368,7.23e-24,13;CL:0002159,2.57e-22,14;CL:0000066,3.51e-21,253;CL:0000223,1.31e-19,58;CL:0000622,6.82e-17,5;CL:0000154,5.16e-14,6;CL:0002202,1.91e-13,9;CL:0002632,1.91e-13,9;CL:0002077,2.17e-13,34;CL:0000244,3.27e-13,4;CL:0000731,3.27e-13,4;CL:0002251,1.02e-11,20;CL:0002328,3.64e-11,3;CL:0000068,3.89e-11,3;CL:0000069,3.89e-11,3;CL:0000307,3.89e-11,3;CL:0000377,3.89e-11,3;CL:0002623,9.45e-11,3;CL:0002166,3.41e-10,3;CL:0002621,5.12e-10,3;CL:0002577,1.22e-09,3;CL:0000240,2.24e-09,6;CL:0000311,2.24e-09,6;CL:0000079,2.24e-09,6;CL:0000237,2.24e-09,6;CL:0000036,2.24e-09,6;CL:0000357,2.24e-09,6;CL:0000114,2.24e-09,6;CL:0000362,2.34e-09,9;CL:0000150,3.30e-09,9;CL:0000575,3.17e-08,2;CL:0000317,7.60e-08,2;CL:1000448,7.60e-08,2;CL:0002308,7.60e-08,2;CL:0002140,7.60e-08,2;CL:0002327,8.38e-08,4;CL:0002321,3.71e-07,250;CL:0000312,9.41e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000377;3.89e-11;3!CL:0000223;8.59e-11;58!CL:0000357;2.31e-09;6!CL:0000114;2.31e-09;6 | |||
|ontology_enrichment_disease=DOID:1749!1.62e-14!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!4.47e-15!72;UBERON:0000166!3.99e-14!21;UBERON:0004119!4.37e-13!169;UBERON:0000925!4.37e-13!169;UBERON:0006595!4.37e-13!169;UBERON:0000161!8.58e-13!35;UBERON:0000165!1.40e-11!28;UBERON:0000930!1.40e-11!28;UBERON:0000365!1.38e-10!5;UBERON:0003729!2.90e-10!5;UBERON:0005631!4.73e-10!14;UBERON:0000158!4.73e-10!14;UBERON:0003102!6.52e-10!95;UBERON:0000065!3.39e-09!53;UBERON:0007196!5.60e-09!14;UBERON:0001558!5.60e-09!14;UBERON:0005910!9.69e-09!6;UBERON:0000974!1.59e-08!10;UBERON:0003343!2.98e-08!4;UBERON:0004785!2.98e-08!4;UBERON:0004815!6.09e-08!3;UBERON:0002031!6.09e-08!3;UBERON:0006562!1.30e-07!11;UBERON:0003126!1.53e-07!7;UBERON:0001005!1.53e-07!7;UBERON:0001444!1.69e-07!48;UBERON:0001949!3.55e-07!3;UBERON:0000344!3.61e-07!12;UBERON:0004175!4.63e-07!25;UBERON:0000305!5.89e-07!7;UBERON:0001723!7.01e-07!3;UBERON:0001033!7.01e-07!3;UBERON:0010056!7.01e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;4.13e-12;12!UBERON:0004815;3.58e-11;3!UBERON:0002031;3.58e-11;3!UBERON:0000365;1.45e-10;5!UBERON:0001949;4.81e-10;3!UBERON:0000165;1.29e-09;28!UBERON:0005910;8.35e-09;6!UBERON:0001911;7.45e-08;4!UBERON:0002419;7.85e-08;2!UBERON:0007771;7.85e-08;2!UBERON:0003297;7.85e-08;2!UBERON:0001821;7.85e-08;2!UBERON:0003487;7.85e-08;2!UBERON:0001820;7.85e-08;2!UBERON:0001708;9.52e-08;4!UBERON:0008895;9.52e-08;4!UBERON:0007196;9.57e-08;15!UBERON:0001558;9.57e-08;15!UBERON:0000161;1.91e-07;19!UBERON:0000166;1.91e-07;19!UBERON:0001003;1.97e-07;15!UBERON:0007376;1.97e-07;15!UBERON:0001987;2.61e-07;4!UBERON:0010371;7.35e-07;31!UBERON:0000305;7.61e-07;7!UBERON:0002185;7.84e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,8.62e-13,99;UBERON:0004119,2.48e-11,160;UBERON:0000925,2.48e-11,160;UBERON:0006595,2.48e-11,160;UBERON:0004815,3.64e-11,3;UBERON:0002031,3.64e-11,3;UBERON:0001004,3.89e-11,74;UBERON:0000365,1.42e-10,5;UBERON:0000166,2.90e-10,22;UBERON:0001949,5.12e-10,3;UBERON:0000033,1.64e-09,56;UBERON:0000153,1.83e-09,62;UBERON:0007811,1.83e-09,62;UBERON:0005631,2.10e-09,14;UBERON:0000158,2.10e-09,14;UBERON:0000165,3.36e-09,29;UBERON:0000930,3.36e-09,29;UBERON:0005910,8.18e-09,6;UBERON:0000161,1.64e-08,36;UBERON:0002419,7.60e-08,2;UBERON:0007771,7.60e-08,2;UBERON:0003297,7.60e-08,2;UBERON:0001821,7.60e-08,2;UBERON:0003487,7.60e-08,2;UBERON:0001820,7.60e-08,2;UBERON:0005089,7.60e-08,2;UBERON:0005088,7.60e-08,2;UBERON:0001911,8.38e-08,4;UBERON:0005333,8.38e-08,4;UBERON:0008425,8.38e-08,4;UBERON:0005311,8.38e-08,4;UBERON:0001708,9.64e-08,4;UBERON:0008895,9.64e-08,4;UBERON:0007196,9.64e-08,15;UBERON:0001558,9.64e-08,15;UBERON:0001003,1.86e-07,15;UBERON:0007376,1.86e-07,15;UBERON:0007383,1.86e-07,15;UBERON:0001987,2.47e-07,4;UBERON:0004340,2.47e-07,4;UBERON:0001444,4.92e-07,49;UBERON:0002185,7.91e-07,5;UBERON:0000305,8.46e-07,7 | |||
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|short_description=p6@KRT5 | |short_description=p6@KRT5 | ||
}} | }} |
Latest revision as of 23:30, 18 September 2015
Short description: | p6@KRT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_KRT5_5end |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | 123bp_to_ENST00000549511_5end |
EntrezGene: | KRT5 |
HGNC: | 6442 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data