FFCP PHASE1:Mm9::chr10:32803050..32803070,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76757 | |EntrezGene=76757 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=14 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q9U7,E9PWI1,E9Q9K5,Q9CV36,Q8VIN9,Q8VIN8,Q8VIN7 | |UniProt=E9Q9U7,E9PWI1,E9Q9K5,Q9CV36,Q8VIN9,Q8VIN8,Q8VIN7 | ||
|association_with_transcript=-218bp_to_ENSMUST00000050626,ENSMUST00000075979,ENSMUST00000095762,NM_029726,uc007etz.2,uc007eua.2,uc007eub.2,uc011xcl.1_5end | |association_with_transcript=-218bp_to_ENSMUST00000050626,ENSMUST00000075979,ENSMUST00000095762,NM_029726,uc007etz.2,uc007eua.2,uc007eub.2,uc011xcl.1_5end | ||
|cluster_id=chr10:32803050..32803070,+ | |||
|description=CAGE_peak_3_at_Trdn_5end | |description=CAGE_peak_3_at_Trdn_5end | ||
|id=chr10:32803050..32803070,+ | |id=chr10:32803050..32803070,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!7.57e-12!18;UBERON:0000948!7.57e-12!18;UBERON:0005498!7.57e-12!18;UBERON:0004140!7.57e-12!18;UBERON:0009881!7.57e-12!18;UBERON:0004141!7.57e-12!18;UBERON:0003084!7.57e-12!18;UBERON:0007005!7.57e-12!18;UBERON:0004139!7.57e-12!18;UBERON:0004291!7.57e-12!18;UBERON:0004535!4.01e-08!23;UBERON:0001009!4.01e-08!23;UBERON:0003102!1.01e-07!23 | |ontology_enrichment_uberon=UBERON:0007100!7.57e-12!18;UBERON:0000948!7.57e-12!18;UBERON:0005498!7.57e-12!18;UBERON:0004140!7.57e-12!18;UBERON:0009881!7.57e-12!18;UBERON:0004141!7.57e-12!18;UBERON:0003084!7.57e-12!18;UBERON:0007005!7.57e-12!18;UBERON:0004139!7.57e-12!18;UBERON:0004291!7.57e-12!18;UBERON:0004535!4.01e-08!23;UBERON:0001009!4.01e-08!23;UBERON:0003102!1.01e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.83e-10,18;UBERON:0000948,2.83e-10,18;UBERON:0005498,2.83e-10,18;UBERON:0004140,2.83e-10,18;UBERON:0009881,2.83e-10,18;UBERON:0004141,2.83e-10,18;UBERON:0003084,2.83e-10,18;UBERON:0007005,2.83e-10,18;UBERON:0004139,2.83e-10,18;UBERON:0004291,2.83e-10,18;UBERON:0004535,1.64e-07,23;UBERON:0001009,1.64e-07,23;UBERON:0005418,7.74e-07,5;UBERON:0002472,7.74e-07,5;UBERON:0008784,7.74e-07,5;UBERON:0006058,7.74e-07,5;UBERON:0004709,7.74e-07,5;UBERON:0002529,7.74e-07,5;UBERON:0010538,7.74e-07,5;UBERON:0005420,7.74e-07,5;UBERON:0010758,7.74e-07,5;UBERON:0000978,7.74e-07,5;UBERON:0002103,7.74e-07,5;UBERON:0000376,7.74e-07,5;UBERON:0000154,7.74e-07,5;UBERON:0010709,7.74e-07,5;UBERON:0005730,7.74e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0,0,0,0,4.52947179852746,4.19598885074748,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99051152976149,0,0.210441855886474,0,0,0.540186389416048,0.753524089178575,0.544291993210623,0.12811372028485,0.374806898238915,0.258703370739016,0,0.189106080167819,0.175951124163949,0.657587197282725,0.556094498451196,0.348252166522167,0.61734640922383,0,0,0,0,0.828503090142008,1.17263029990548,1.62055855314913,3.31442629819294,2.95146347621106,2.62254091908543,3.0229412817553,4.29237442239391,1.28441876603886,1.81015834904829,1.97000956894914,0.810688095458557,0.877199924551994,0.878200461164203,0.939444931322602,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1581393410799,0,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0.220528398054962,2.96795255294664,0.645857706783622,0.482503399425247,0.238744688006273,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0.864090018773596,0,0,0,0,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0,0,0,3.17422537061296,0,0,0,0.965947970160952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.729320151204882,0,0.367687016900028,2.00022055021454,1.23621034343337,0.962757628775446,1.76888048234658,0.50695859978048,1.50901073108861,1.96647165686753,1.53660365771686,1.37845125493472,2.85776214769844,1.85414921511769,2.31491064556446,2.88460130562315,1.61918812147837,1.71434626192708,1.4198064492747,2.14592570952589,1.74415699958794,1.50575008664529,2.28459441307527,2.56099162021882,1.05227884575137,1.08643291076689,1.12228454331548,1.30498519936592,0.886540341380071,1.63692417267876,1.39443157067369,1.73615949883027,0,2.57324769289949,1.50409737833809,7.07766828654721,2.64709702943419,8.11537424671475 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0,0,0,0,4.52947179852746,4.19598885074748,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99051152976149,0,0.210441855886474,0,0,0.540186389416048,0.753524089178575,0.544291993210623,0.12811372028485,0.374806898238915,0.258703370739016,0,0.189106080167819,0.175951124163949,0.657587197282725,0.556094498451196,0.348252166522167,0.61734640922383,0,0,0,0,0.828503090142008,1.17263029990548,1.62055855314913,3.31442629819294,2.95146347621106,2.62254091908543,3.0229412817553,4.29237442239391,1.28441876603886,1.81015834904829,1.97000956894914,0.810688095458557,0.877199924551994,0.878200461164203,0.939444931322602,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1581393410799,0,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0.220528398054962,2.96795255294664,0.645857706783622,0.482503399425247,0.238744688006273,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0.864090018773596,0,0,0,0,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0,0,0,3.17422537061296,0,0,0,0.965947970160952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.729320151204882,0,0.367687016900028,2.00022055021454,1.23621034343337,0.962757628775446,1.76888048234658,0.50695859978048,1.50901073108861,1.96647165686753,1.53660365771686,1.37845125493472,2.85776214769844,1.85414921511769,2.31491064556446,2.88460130562315,1.61918812147837,1.71434626192708,1.4198064492747,2.14592570952589,1.74415699958794,1.50575008664529,2.28459441307527,2.56099162021882,1.05227884575137,1.08643291076689,1.12228454331548,1.30498519936592,0.886540341380071,1.63692417267876,1.39443157067369,1.73615949883027,0,2.57324769289949,1.50409737833809,7.07766828654721,2.64709702943419,8.11537424671475 | ||
|short_description=p3@Trdn | |short_description=p3@Trdn | ||
}} | }} |
Latest revision as of 23:00, 25 September 2015
Short description: | p3@Trdn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Trdn_5end |
Coexpression cluster: | MCL_coexpression_mm9:14 |
Association with transcript: | -218bp_to_ENSMUST00000050626, ENSMUST00000075979, ENSMUST00000095762, NM_029726, uc007etz.2, uc007eua.2, uc007eub.2, uc011xcl.1_5end |
EntrezGene: | Trdn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.83e-10 | 18 |
heart | 2.83e-10 | 18 |
primitive heart tube | 2.83e-10 | 18 |
primary heart field | 2.83e-10 | 18 |
anterior lateral plate mesoderm | 2.83e-10 | 18 |
heart tube | 2.83e-10 | 18 |
heart primordium | 2.83e-10 | 18 |
cardiac mesoderm | 2.83e-10 | 18 |
cardiogenic plate | 2.83e-10 | 18 |
heart rudiment | 2.83e-10 | 18 |
cardiovascular system | 1.64e-07 | 23 |
circulatory system | 1.64e-07 | 23 |
hindlimb bud | 7.74e-07 | 5 |
stylopod | 7.74e-07 | 5 |
lower limb segment | 7.74e-07 | 5 |
multi-limb segment region | 7.74e-07 | 5 |
pelvic appendage | 7.74e-07 | 5 |
limb segment | 7.74e-07 | 5 |
paired limb/fin segment | 7.74e-07 | 5 |
pelvic appendage bud | 7.74e-07 | 5 |
subdivision of organism along appendicular axis | 7.74e-07 | 5 |
leg | 7.74e-07 | 5 |
hindlimb | 7.74e-07 | 5 |
hindlimb stylopod | 7.74e-07 | 5 |
posterior region of body | 7.74e-07 | 5 |
pelvic complex | 7.74e-07 | 5 |
hindlimb/pelvic fin field | 7.74e-07 | 5 |