FFCP PHASE1:Mm9::chr4:140980163..140980170,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:140980163..140980170,+ | |||
|description=CAGE_peak_at_chr4:140980163..140980170,+ | |description=CAGE_peak_at_chr4:140980163..140980170,+ | ||
|id=chr4:140980163..140980170,+ | |id=chr4:140980163..140980170,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.02e-07,3;CL:0000737,1.02e-07,3;CL:0000746,1.02e-07,3;CL:0000513,1.02e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.90e-24!18;UBERON:0000948!1.90e-24!18;UBERON:0005498!1.90e-24!18;UBERON:0004140!1.90e-24!18;UBERON:0009881!1.90e-24!18;UBERON:0004141!1.90e-24!18;UBERON:0003084!1.90e-24!18;UBERON:0007005!1.90e-24!18;UBERON:0004139!1.90e-24!18;UBERON:0004291!1.90e-24!18;UBERON:0004535!7.68e-20!23;UBERON:0001009!7.68e-20!23;UBERON:0004872!1.86e-14!33;UBERON:0003103!7.95e-12!43;UBERON:0003914!2.58e-08!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.75e-64,18;UBERON:0000948,6.75e-64,18;UBERON:0005498,6.75e-64,18;UBERON:0004140,6.75e-64,18;UBERON:0009881,6.75e-64,18;UBERON:0004141,6.75e-64,18;UBERON:0003084,6.75e-64,18;UBERON:0007005,6.75e-64,18;UBERON:0004139,6.75e-64,18;UBERON:0004291,6.75e-64,18;UBERON:0004535,1.23e-49,23;UBERON:0001009,1.23e-49,23;UBERON:0004872,4.66e-34,33;UBERON:0003103,2.51e-29,43;UBERON:0003914,2.34e-23,47;UBERON:0003081,1.86e-13,87;UBERON:0010314,1.25e-12,92;UBERON:0000926,3.70e-09,120;UBERON:0004120,3.70e-09,120;UBERON:0006603,3.70e-09,120;UBERON:0004111,5.51e-09,122;UBERON:0000025,2.04e-08,114;UBERON:0001048,5.77e-08,134 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,2.0057340795713,1.03134418455488,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,2.57978665979206,2.16074473753218,1.65721314909647,0.393528463494808,2.00547246753592,3.48800917125612,1.87791380979733,2.45207218971056,1.15191894939436,3.77585167381919,1.54030738137126,2.19299981137998,3.51280184465681,1.47627060636409,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.484393280087717,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,1.13365191807606,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0,0.760437899670719,0.188626341386076,0.0936415074698824,0.0640251524048693,0.34461281373368,0,0.115884325944855,0.192909220463705,0.824171801606613,0.147198920134397,0.685738504770831,0.354951612318675,0.238436189947321,0,0.188218760830661,0.25384382367503,0.365855945745545,0.789209134313529,0,0,0.355905054372522,0,0.409231043169689,0.154936841185966,0,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,2.0057340795713,1.03134418455488,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,2.57978665979206,2.16074473753218,1.65721314909647,0.393528463494808,2.00547246753592,3.48800917125612,1.87791380979733,2.45207218971056,1.15191894939436,3.77585167381919,1.54030738137126,2.19299981137998,3.51280184465681,1.47627060636409,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.484393280087717,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,1.13365191807606,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0,0.760437899670719,0.188626341386076,0.0936415074698824,0.0640251524048693,0.34461281373368,0,0.115884325944855,0.192909220463705,0.824171801606613,0.147198920134397,0.685738504770831,0.354951612318675,0.238436189947321,0,0.188218760830661,0.25384382367503,0.365855945745545,0.789209134313529,0,0,0.355905054372522,0,0.409231043169689,0.154936841185966,0,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p@chr4:140980163..140980170,+ | |short_description=p@chr4:140980163..140980170,+ | ||
}} | }} |
Latest revision as of 02:19, 5 August 2015
Short description: | p@chr4:140980163..140980170, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:140980163..140980170, + |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.02e-07 | 3 |
striated muscle cell | 1.02e-07 | 3 |
cardiac muscle cell | 1.02e-07 | 3 |
cardiac muscle myoblast | 1.02e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 6.75e-64 | 18 |
heart | 6.75e-64 | 18 |
primitive heart tube | 6.75e-64 | 18 |
primary heart field | 6.75e-64 | 18 |
anterior lateral plate mesoderm | 6.75e-64 | 18 |
heart tube | 6.75e-64 | 18 |
heart primordium | 6.75e-64 | 18 |
cardiac mesoderm | 6.75e-64 | 18 |
cardiogenic plate | 6.75e-64 | 18 |
heart rudiment | 6.75e-64 | 18 |
cardiovascular system | 1.23e-49 | 23 |
circulatory system | 1.23e-49 | 23 |
splanchnic layer of lateral plate mesoderm | 4.66e-34 | 33 |
compound organ | 2.51e-29 | 43 |
epithelial tube | 2.34e-23 | 47 |
lateral plate mesoderm | 1.86e-13 | 87 |
structure with developmental contribution from neural crest | 1.25e-12 | 92 |
mesoderm | 3.70e-09 | 120 |
mesoderm-derived structure | 3.70e-09 | 120 |
presumptive mesoderm | 3.70e-09 | 120 |
anatomical conduit | 5.51e-09 | 122 |
tube | 2.04e-08 | 114 |
primordium | 5.77e-08 | 134 |