FFCP PHASE1:Mm9::chr11:6446878..6446901,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216527 | |EntrezGene=216527 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8K2Y9 | |UniProt=Q8K2Y9 | ||
|association_with_transcript=0bp_to_ENSMUST00000000388,NM_001190343,NM_146014,uc007hyv.2,uc011xri.1_5end | |association_with_transcript=0bp_to_ENSMUST00000000388,NM_001190343,NM_146014,uc007hyv.2,uc011xri.1_5end | ||
|cluster_id=chr11:6446878..6446901,+ | |||
|description=CAGE_peak_2_at_Ccm2_5end | |description=CAGE_peak_2_at_Ccm2_5end | ||
|id=chr11:6446878..6446901,+ | |id=chr11:6446878..6446901,+ | ||
|ontology_enrichment_celltype=CL:0000221!4.63e-14!44;CL:0000133!4.63e-14!44;CL:0002319!5.32e-14!43;CL:0000117!1.58e-11!23;CL:0000337!1.58e-11!23;CL:0000055!6.10e-11!50;CL:0000540!1.56e-09!33;CL:0000047!1.56e-09!33;CL:0000031!1.56e-09!33;CL:0000404!1.56e-09!33;CL:0000393!1.12e-07!39;CL:0000211!1.12e-07!39;CL:0002321!7.00e-07!70;CL:0000220!7.00e-07!70 | |ontology_enrichment_celltype=CL:0000221!4.63e-14!44;CL:0000133!4.63e-14!44;CL:0002319!5.32e-14!43;CL:0000117!1.58e-11!23;CL:0000337!1.58e-11!23;CL:0000055!6.10e-11!50;CL:0000540!1.56e-09!33;CL:0000047!1.56e-09!33;CL:0000031!1.56e-09!33;CL:0000404!1.56e-09!33;CL:0000393!1.12e-07!39;CL:0000211!1.12e-07!39;CL:0002321!7.00e-07!70;CL:0000220!7.00e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.61e-14,44;CL:0000133,4.61e-14,44;CL:0002319,5.30e-14,43;CL:0000117,1.58e-11,23;CL:0000337,1.58e-11,23;CL:0000540,1.55e-09,33;CL:0000047,1.55e-09,33;CL:0000031,1.55e-09,33;CL:0000404,1.55e-09,33;CL:0000393,1.12e-07,39;CL:0000211,1.12e-07,39;CL:0002321,6.80e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.79e-10!75;UBERON:0001016!2.79e-10!75;UBERON:0001017!9.77e-10!73;UBERON:0005743!9.77e-10!73;UBERON:0004121!8.63e-07!102;UBERON:0000924!8.63e-07!102;UBERON:0006601!8.63e-07!102 | |ontology_enrichment_uberon=UBERON:0000073!2.79e-10!75;UBERON:0001016!2.79e-10!75;UBERON:0001017!9.77e-10!73;UBERON:0005743!9.77e-10!73;UBERON:0004121!8.63e-07!102;UBERON:0000924!8.63e-07!102;UBERON:0006601!8.63e-07!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.80e-10,75;UBERON:0001017,9.78e-10,73;UBERON:0004121,9.39e-08,95;UBERON:0000924,9.39e-08,95;UBERON:0006601,9.39e-08,95;UBERON:0000073,1.41e-07,54;UBERON:0002346,4.19e-07,64;UBERON:0003075,4.19e-07,64;UBERON:0007284,4.19e-07,64 | |||
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| 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| ||
|short_description=p2@Ccm2 | |short_description=p2@Ccm2 | ||
}} | }} |
Latest revision as of 21:50, 1 October 2015
Short description: | p2@Ccm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ccm2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000000388, NM_001190343, NM_146014, uc007hyv.2, uc011xri.1_5end |
EntrezGene: | Ccm2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.61e-14 | 44 |
neurectodermal cell | 4.61e-14 | 44 |
neural cell | 5.30e-14 | 43 |
CNS neuron (sensu Vertebrata) | 1.58e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.58e-11 | 23 |
neuron | 1.55e-09 | 33 |
neuronal stem cell | 1.55e-09 | 33 |
neuroblast | 1.55e-09 | 33 |
electrically signaling cell | 1.55e-09 | 33 |
electrically responsive cell | 1.12e-07 | 39 |
electrically active cell | 1.12e-07 | 39 |
embryonic cell | 6.80e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.80e-10 | 75 |
central nervous system | 9.78e-10 | 73 |
ectoderm-derived structure | 9.39e-08 | 95 |
ectoderm | 9.39e-08 | 95 |
presumptive ectoderm | 9.39e-08 | 95 |
regional part of nervous system | 1.41e-07 | 54 |
neurectoderm | 4.19e-07 | 64 |
neural plate | 4.19e-07 | 64 |
presumptive neural plate | 4.19e-07 | 64 |