FFCP PHASE1:Mm9::chr5:53225423..53225453,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=52206 | |EntrezGene=52206 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3TM92,Q91W96 | |UniProt=Q3TM92,Q91W96 | ||
|association_with_transcript=49bp_to_NM_024213,uc008xkw.1,uc008xkx.1_5end | |association_with_transcript=49bp_to_NM_024213,uc008xkw.1,uc008xkx.1_5end | ||
|cluster_id=chr5:53225423..53225453,+ | |||
|description=CAGE_peak_5_at_Anapc4_5end | |description=CAGE_peak_5_at_Anapc4_5end | ||
|id=chr5:53225423..53225453,+ | |id=chr5:53225423..53225453,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!2.17e-09!17;UBERON:0005181!2.17e-09!17;UBERON:0002224!2.17e-09!17;UBERON:0000915!2.17e-09!17;UBERON:0008947!2.17e-09!17;UBERON:0003258!2.17e-09!17;UBERON:0005153!2.42e-09!17;UBERON:0003104!7.20e-09!131;UBERON:0009142!7.20e-09!131;UBERON:0002100!1.31e-08!98;UBERON:0005157!1.94e-08!27;UBERON:0001048!4.66e-08!147;UBERON:0000926!8.11e-08!193;UBERON:0004120!8.11e-08!193;UBERON:0006603!8.11e-08!193;UBERON:0002048!1.75e-07!14;UBERON:0000117!1.75e-07!14;UBERON:0000171!1.75e-07!14;UBERON:0000170!1.75e-07!14;UBERON:0005597!1.75e-07!14;UBERON:0000118!1.75e-07!14;UBERON:0000466!2.75e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,3.03e-10,90;UBERON:0005178,6.02e-10,17;UBERON:0005181,6.02e-10,17;UBERON:0002224,6.02e-10,17;UBERON:0000915,6.02e-10,17;UBERON:0008947,6.02e-10,17;UBERON:0003258,6.02e-10,17;UBERON:0005153,6.75e-10,17;UBERON:0005157,5.23e-09,20;UBERON:0002048,6.61e-08,14;UBERON:0000117,6.61e-08,14;UBERON:0000171,6.61e-08,14;UBERON:0000170,6.61e-08,14;UBERON:0005597,6.61e-08,14;UBERON:0000118,6.61e-08,14;UBERON:0005177,6.85e-08,79 | |||
|phase1_expression=3.04282809499109,0,0.909998478779072,1.81478526784098,0.500895729946347,0.839396359559449,2.33612640595526,1.03298658753261,0.703943610758334,1.87251621057595,0.513653904676515,0.159544317990673,0.856003649656029,0.961624426608971,1.33243904726265,0.809901069559304,2.09868563438444,0.157731082679119,0.274228867211478,0,0.850432901510698,1.98581902401771,1.30599894569468,1.91990907352088,2.98232065387321,0.57423196411502,1.29228598847722,1.29282739611533,0.950117097281869,0.504060259519861,0.886922042621219,0,0,0,2.3108129580102,3.49092755252834,2.6542016314108,2.09265815368454,0.7813353445238,0.523523743973798,0,0,0,3.39921408534059,3.4468156614635,3.85448179539531,0,0.218025156380447,0.659058548203415,1.36100929351998,0.139986421625363,0,0.167782606057736,0,0.672187598284928,3.8588915405392,2.0057340795713,3.09403255366465,0.404632921719196,0.528990979272033,0.633831403506179,1.0165335962074,0,0.449949858640699,0,0,0.599200221036809,0.384218305321555,1.34796496001021,1.08004750665353,0.630974884054146,0,0.220868540951614,0.734944795289724,0.670918297127655,0.919218786610021,2.20231761998777,0.383062014255563,0.153606533256243,0.263772575460388,0.457438218012048,0,0.837548997004143,0,0.15279824777681,0,0.284743361598206,0.745597783301202,1.74170244666323,1.20914496170857,1.73918693221007,2.58127163094416,2.719885334831,2.15881276655127,3.89865850468601,4.03224198387602,1.82577746171277,3.40860645156115,4.41636207824877,3.88673531961374,1.26759077799012,6.41632387071589,2.54805239706646,0,5.84525810730278,5.06719730950197,7.58286667522175,2.05530983494308,0.776813650941515,2.22663208597237,1.73485326766136,1.21786191324856,1.15307748628029,2.11011696773672,1.52865319276416,2.51333182659351,0.988779870937496,3.47038456607788,0.884610551949874,2.26473589926373,2.65009822152472,2.90925151881133,3.72783522436244,0.292780797011547,0.628340120440365,1.27728527604296,1.67741174308288,1.19980546198682,0.889491589511453,0.299581278809645,0,0.753926112677186,0.521472960576829,0.767146371990992,0.41557608911912,1.1356888414743,1.12023300235348,2.36373244159177,1.51633655060205,6.10281382070775,0.650602214813519,1.60931473103431,0.900310649026746,1.50704817835715,1.08858398642125,0.896796041993948,0.937017245597288,1.29351685369508,1.5089759505299,2.45837904218165,3.16712023495108,2.19195732427575,3.33656699070717,2.78601733217733,2.67516777330327,1.79130840136644,0,0.51469581422943,0.284163499395593,0.828503090142008,2.11073453982987,1.44049649168812,3.07768156260773,1.57411385397923,1.3884040159864,2.09280550275367,1.07309360559848,1.5179494507732,1.97471819896177,2.29834449710733,1.94565142910054,2.63159977365598,3.07370161407471,4.16039898157152,0,0.617427674275707,2.31293148088659,1.05780226665418,0.853153002140936,1.39342003116263,0.38660238396628,0.403367049246685,0.667134131534611,1.33157938278791,1.89811624617805,0.494096864172033,0.502670417600539,0.397912944082302,0.779856348476481,0,1.72910439899755,1.99141273254367,1.70701110857774,0.913988100877831,1.1270773567308,1.01825663922657,0.775809948670503,0.631222379012867,1.26473074248515,1.32849133181642,2.19798218977925,1.48076596706161,5.63259991465583,0.333690211432188,0,0.224862112384854,0.608580364165509,0.241177159752417,1.2731292589071,0.863088412352432,2.10775794807546,2.47105271869273,0,3.34926852901653,5.92871578917665,6.56705082662491,6.09951205974501,2.8946611281802,4.0645701836653,1.51593129416388,3.42226450528254,2.37643120085263,2.58159273117352,4.85768146581266,4.04674189506223,7.41507861859636,3.15270288212382,2.87904096543407,3.98636921643718,3.93271955317771,3.9717545829156,5.06271705035291,0,0,10.8188140064188,4.96686143348518,0.481651769963376,0.937693492737625,2.13115428989678,4.03953483526997,1.89304931649754,2.34263246577983,0.646270193198397,0.716906393857656,0.891194696329576,1.13230612315533,2.42886421004937,0.876767573733936,1.97643888973262,0.321321316421807,1.98716119291576,1.42452482933804,0.977321756121456,3.13443233647817,2.65490276679926,0.728341908464944,0.906970670894253,0.943025398779491,2.36241514304618,2.15204603560749,2.06742634534577,3.63533729477506,3.20847640546249,6.32073515871632,6.32511651449993,7.21948802737308,3.40439605753788,1.8006109403131,1.03486947026204,1.71469628025274,1.95074257006501,1.24858172321449,2.13913726782757,0.608929898229199,0.704015124191131,1.0591603543191,4.19003956304428,1.48397627647332,1.13025098687134,2.95533332147964,2.74556391207214,2.46211349617592,1.45740418314925,1.48340241608408,1.02522528478712,1.03193433981611,0.185194527369712,0.941842285023455,0.956859594047176,0.915112692826091,3.73952545986482,2.79902904647316,1.93479963326193,0.954670618015114,1.58167996790568,1.01659733563424,1.29606408986162,2.09088296014469,1.74690050996942,2.02296519577231,2.72756403893609,2.35580347785627,1.55537967950151,2.4853572523477,0.56369293868419,1.19613236835183,0.992750942742586,0.777804753376191,1.03327858782185,1.01373675294467,0.234714477291508,2.0832701575032,1.67774951081137,0.483168241652012,1.15212002503146,0.632022241256357,1.41907650703115,1.1298205288131,0.77952493786677,1.61124026100733,0.596044064343795,0.360586348559907,0.886137163047463,0.807731599585181,0.838274873204998,0.806609481094724,0.779663045918019,0.577271049841977,1.16876902181569,3.17422537061296,0,0.717710852875806,0.839423081820392,0.772758376128762,1.31377732815827,2.93042598827624,3.64426244434412,2.50786052017682,0,0,0.572895513439397,0.515559547031063,0,0.755393897389701,0.675022500231806,0,0,0,0.830298780673413,1.59609949360412,2.73173769206615,2.91728060481953,0.628839487883947,0.919217542250071,1.33348036680969,2.26638562962784,1.92551525755089,1.26348605881899,1.2673964994512,1.13175804831646,1.21733959710847,1.08842759088278,1.95280594449085,1.42888107384922,1.15884325944855,2.89363830695558,0.824171801606613,1.91358596174717,2.40008476669791,1.24233064311536,2.14592570952589,0.726732083161643,1.78807822789128,2.03075058940024,0.914639864363863,1.57841826862706,1.49384525230448,2.24456908663095,1.18635018124174,1.67457620038458,0.409231043169689,1.23949472948773,1.15743966588685,1.24905288968973,2.33931608445408,1.07435527024149,0.956441660344217,3.30887128679273,1.62307484934295 | |phase1_expression=3.04282809499109,0,0.909998478779072,1.81478526784098,0.500895729946347,0.839396359559449,2.33612640595526,1.03298658753261,0.703943610758334,1.87251621057595,0.513653904676515,0.159544317990673,0.856003649656029,0.961624426608971,1.33243904726265,0.809901069559304,2.09868563438444,0.157731082679119,0.274228867211478,0,0.850432901510698,1.98581902401771,1.30599894569468,1.91990907352088,2.98232065387321,0.57423196411502,1.29228598847722,1.29282739611533,0.950117097281869,0.504060259519861,0.886922042621219,0,0,0,2.3108129580102,3.49092755252834,2.6542016314108,2.09265815368454,0.7813353445238,0.523523743973798,0,0,0,3.39921408534059,3.4468156614635,3.85448179539531,0,0.218025156380447,0.659058548203415,1.36100929351998,0.139986421625363,0,0.167782606057736,0,0.672187598284928,3.8588915405392,2.0057340795713,3.09403255366465,0.404632921719196,0.528990979272033,0.633831403506179,1.0165335962074,0,0.449949858640699,0,0,0.599200221036809,0.384218305321555,1.34796496001021,1.08004750665353,0.630974884054146,0,0.220868540951614,0.734944795289724,0.670918297127655,0.919218786610021,2.20231761998777,0.383062014255563,0.153606533256243,0.263772575460388,0.457438218012048,0,0.837548997004143,0,0.15279824777681,0,0.284743361598206,0.745597783301202,1.74170244666323,1.20914496170857,1.73918693221007,2.58127163094416,2.719885334831,2.15881276655127,3.89865850468601,4.03224198387602,1.82577746171277,3.40860645156115,4.41636207824877,3.88673531961374,1.26759077799012,6.41632387071589,2.54805239706646,0,5.84525810730278,5.06719730950197,7.58286667522175,2.05530983494308,0.776813650941515,2.22663208597237,1.73485326766136,1.21786191324856,1.15307748628029,2.11011696773672,1.52865319276416,2.51333182659351,0.988779870937496,3.47038456607788,0.884610551949874,2.26473589926373,2.65009822152472,2.90925151881133,3.72783522436244,0.292780797011547,0.628340120440365,1.27728527604296,1.67741174308288,1.19980546198682,0.889491589511453,0.299581278809645,0,0.753926112677186,0.521472960576829,0.767146371990992,0.41557608911912,1.1356888414743,1.12023300235348,2.36373244159177,1.51633655060205,6.10281382070775,0.650602214813519,1.60931473103431,0.900310649026746,1.50704817835715,1.08858398642125,0.896796041993948,0.937017245597288,1.29351685369508,1.5089759505299,2.45837904218165,3.16712023495108,2.19195732427575,3.33656699070717,2.78601733217733,2.67516777330327,1.79130840136644,0,0.51469581422943,0.284163499395593,0.828503090142008,2.11073453982987,1.44049649168812,3.07768156260773,1.57411385397923,1.3884040159864,2.09280550275367,1.07309360559848,1.5179494507732,1.97471819896177,2.29834449710733,1.94565142910054,2.63159977365598,3.07370161407471,4.16039898157152,0,0.617427674275707,2.31293148088659,1.05780226665418,0.853153002140936,1.39342003116263,0.38660238396628,0.403367049246685,0.667134131534611,1.33157938278791,1.89811624617805,0.494096864172033,0.502670417600539,0.397912944082302,0.779856348476481,0,1.72910439899755,1.99141273254367,1.70701110857774,0.913988100877831,1.1270773567308,1.01825663922657,0.775809948670503,0.631222379012867,1.26473074248515,1.32849133181642,2.19798218977925,1.48076596706161,5.63259991465583,0.333690211432188,0,0.224862112384854,0.608580364165509,0.241177159752417,1.2731292589071,0.863088412352432,2.10775794807546,2.47105271869273,0,3.34926852901653,5.92871578917665,6.56705082662491,6.09951205974501,2.8946611281802,4.0645701836653,1.51593129416388,3.42226450528254,2.37643120085263,2.58159273117352,4.85768146581266,4.04674189506223,7.41507861859636,3.15270288212382,2.87904096543407,3.98636921643718,3.93271955317771,3.9717545829156,5.06271705035291,0,0,10.8188140064188,4.96686143348518,0.481651769963376,0.937693492737625,2.13115428989678,4.03953483526997,1.89304931649754,2.34263246577983,0.646270193198397,0.716906393857656,0.891194696329576,1.13230612315533,2.42886421004937,0.876767573733936,1.97643888973262,0.321321316421807,1.98716119291576,1.42452482933804,0.977321756121456,3.13443233647817,2.65490276679926,0.728341908464944,0.906970670894253,0.943025398779491,2.36241514304618,2.15204603560749,2.06742634534577,3.63533729477506,3.20847640546249,6.32073515871632,6.32511651449993,7.21948802737308,3.40439605753788,1.8006109403131,1.03486947026204,1.71469628025274,1.95074257006501,1.24858172321449,2.13913726782757,0.608929898229199,0.704015124191131,1.0591603543191,4.19003956304428,1.48397627647332,1.13025098687134,2.95533332147964,2.74556391207214,2.46211349617592,1.45740418314925,1.48340241608408,1.02522528478712,1.03193433981611,0.185194527369712,0.941842285023455,0.956859594047176,0.915112692826091,3.73952545986482,2.79902904647316,1.93479963326193,0.954670618015114,1.58167996790568,1.01659733563424,1.29606408986162,2.09088296014469,1.74690050996942,2.02296519577231,2.72756403893609,2.35580347785627,1.55537967950151,2.4853572523477,0.56369293868419,1.19613236835183,0.992750942742586,0.777804753376191,1.03327858782185,1.01373675294467,0.234714477291508,2.0832701575032,1.67774951081137,0.483168241652012,1.15212002503146,0.632022241256357,1.41907650703115,1.1298205288131,0.77952493786677,1.61124026100733,0.596044064343795,0.360586348559907,0.886137163047463,0.807731599585181,0.838274873204998,0.806609481094724,0.779663045918019,0.577271049841977,1.16876902181569,3.17422537061296,0,0.717710852875806,0.839423081820392,0.772758376128762,1.31377732815827,2.93042598827624,3.64426244434412,2.50786052017682,0,0,0.572895513439397,0.515559547031063,0,0.755393897389701,0.675022500231806,0,0,0,0.830298780673413,1.59609949360412,2.73173769206615,2.91728060481953,0.628839487883947,0.919217542250071,1.33348036680969,2.26638562962784,1.92551525755089,1.26348605881899,1.2673964994512,1.13175804831646,1.21733959710847,1.08842759088278,1.95280594449085,1.42888107384922,1.15884325944855,2.89363830695558,0.824171801606613,1.91358596174717,2.40008476669791,1.24233064311536,2.14592570952589,0.726732083161643,1.78807822789128,2.03075058940024,0.914639864363863,1.57841826862706,1.49384525230448,2.24456908663095,1.18635018124174,1.67457620038458,0.409231043169689,1.23949472948773,1.15743966588685,1.24905288968973,2.33931608445408,1.07435527024149,0.956441660344217,3.30887128679273,1.62307484934295 | ||
|short_description=p5@Anapc4 | |short_description=p5@Anapc4 | ||
}} | }} |
Latest revision as of 02:02, 26 September 2015
Short description: | p5@Anapc4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Anapc4_5end |
Coexpression cluster: | NA |
Association with transcript: | 49bp_to_NM_024213, uc008xkw.1, uc008xkx.1_5end |
EntrezGene: | Anapc4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk | 3.03e-10 | 90 |
thoracic cavity element | 6.02e-10 | 17 |
thoracic segment organ | 6.02e-10 | 17 |
thoracic cavity | 6.02e-10 | 17 |
thoracic segment of trunk | 6.02e-10 | 17 |
respiratory primordium | 6.02e-10 | 17 |
endoderm of foregut | 6.02e-10 | 17 |
epithelial bud | 6.75e-10 | 17 |
epithelial fold | 5.23e-09 | 20 |
lung | 6.61e-08 | 14 |
respiratory tube | 6.61e-08 | 14 |
respiration organ | 6.61e-08 | 14 |
pair of lungs | 6.61e-08 | 14 |
lung primordium | 6.61e-08 | 14 |
lung bud | 6.61e-08 | 14 |
trunk region element | 6.85e-08 | 79 |