FFCP PHASE1:Mm9::chr4:128814121..128814147,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=384061 | |EntrezGene=384061 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=697 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K4Z2 | |UniProt=Q8K4Z2 | ||
|association_with_transcript=-95bp_to_ENSMUST00000102600_5end | |association_with_transcript=-95bp_to_ENSMUST00000102600_5end | ||
|cluster_id=chr4:128814121..128814147,+ | |||
|description=CAGE_peak_1_at_Fndc5_5end | |description=CAGE_peak_1_at_Fndc5_5end | ||
|id=chr4:128814121..128814147,+ | |id=chr4:128814121..128814147,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!8.12e-10!333;UBERON:0000033!3.85e-09!63;UBERON:0001049!8.34e-09!52;UBERON:0005068!8.34e-09!52;UBERON:0006241!8.34e-09!52;UBERON:0007135!8.34e-09!52;UBERON:0000955!5.52e-08!50;UBERON:0006238!5.52e-08!50;UBERON:0002616!1.65e-07!49;UBERON:0002346!3.55e-07!71;UBERON:0003075!3.55e-07!71;UBERON:0007284!3.55e-07!71;UBERON:0003076!8.35e-07!12;UBERON:0003057!8.35e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.40e-10,92;UBERON:0000073,3.67e-08,54;UBERON:0003076,2.64e-07,12;UBERON:0003057,2.64e-07,12;UBERON:0001049,2.79e-07,52;UBERON:0005068,2.79e-07,52;UBERON:0006241,2.79e-07,52;UBERON:0007135,2.79e-07,52 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0.333109761815663,0,0,0.157731082679119,0,0,3.57181818634493,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0.288851619751275,0.831173226792462,0.204169356262369,0,0,0,0,0,0,0,0,0,1.56478268869608,2.8343270329458,0.659058548203415,0.194429899074283,0.279972843250725,2.87505128729943,0,0,0,0,0.573066879877513,3.09403255366465,2.22548106945558,1.5869729378161,0.633831403506179,0,0,0,0,0,4.19440154725767,1.92109152660777,0.311068836925433,0.540023753326763,0.630974884054146,11.7116903605559,9.718215801871,0.244981598429908,0.191690942036473,0,7.70811166995721,12.1302971180928,9.83081812839958,1.45074916503213,0.914876436024097,1.04182674111352,14.5175159480718,5.6276261003168,8.25110537994775,9.1334861496837,7.68807076315156,8.38797506213853,0,0.0755715601067855,0.579728977403356,1.72084775396277,0,0,0,0,10.8142203501449,0,0,0,0.985903938436763,0,0,0,0,0.253359865475099,0.505524445014783,1.1418387971906,0,0.742210695324124,1.21439728736295,1.21786191324856,1.15307748628029,1.05505848386836,1.99900802130698,1.13099932196708,0.494389935468748,0.578397427679647,3.5384422077995,7.117741397686,5.07935492458905,1.45462575940567,1.86391761218122,13.4679166625312,10.6817820474862,0,0,0,0,14.8292733010774,12.3525162761029,1.00523481690292,5.38855392596057,5.37002460393694,13.714010940931,8.27430441645564,5.09196819251581,2.48813941220186,0,1.47309299120532,1.17108398666433,3.90833577536904,2.16074555766419,2.71268672104287,1.29269348387523,1.15302348256365,1.96773621575431,1.81092359517311,0.862271971731369,1.70195472151037,1.93546236580344,4.60311038097907,3.61461423993277,2.43776516565517,2.26360350048738,3.38358253591438,0,0,0,1.86413195281952,2.81431271977315,2.52086886045421,1.65721314909647,4.52557733019029,3.39387648352232,4.65067889500816,11.8040296615832,10.2753501283109,19.7471819896177,21.5059377943615,43.4528819165787,42.251796365921,48.3010253640311,40.5303384656323,7.78072809687271,0.720332286654991,0.330418782983798,0,0.426576501070468,0.232236671860439,1.15980715189884,1.21010114774006,2.00140239460383,3.23383564391351,0,4.6115707322723,4.77536896720512,3.58121649674071,7.01870713628832,0,0.216138049874694,0.398282546508734,0.379335801906163,1.48523066392647,1.1270773567308,1.62921062276251,1.55161989734101,1.26244475802573,1.58091342810643,1.03327103585722,1.255989822731,1.1105744752962,0,0.333690211432188,0.393117990226406,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0,0,0,0,0.744281895337007,0.624075346229121,0.505157755894224,1.25578189465339,0,0.739012760666419,1.13694847062291,0.814824882210129,0.339490171550376,0.704070744865506,1.17254380209271,1.90434912708811,0.780534591431195,2.99506773801763,3.5434350343804,3.6674596791222,1.80249646187312,1.03610989119537,0.433947175744535,0,0,0.491764273019036,0.275936746304732,12.5229460190478,12.8932855251423,0.163934945376675,12.876017287423,0,0,0,0,0,0,0,0,0,13.1741739732941,2.98074178937364,6.94455854302295,6.67836533349662,7.09371528781903,0,1.69946445308487,1.81394134178851,0.754420319023592,2.36241514304618,1.84461088766356,1.29214146584111,2.90826983582004,2.13898427030833,0,1.05418608574999,0,1.70219802876894,0.720244376125241,0.646793418913773,1.28602221018955,1.41872186913819,1.60531935841864,2.30368628842969,0.608929898229199,0,2.75381692122966,0,1.6488625294148,1.45317984026315,1.14594557363496,0.716234064018819,0.984845398470368,1.1659233465194,11.1255181206306,0.170870880797853,1.857481811669,1.29636169158798,0.565105371014073,0.27338845544205,0.228778173206523,0,0,0,1.90934123603023,1.26534397432454,1.42323626988794,0.756037385752609,1.04544148007234,0.87345025498471,1.34864346384821,0.909188012978695,0.523511883968059,1.29614973291793,15.5334828271731,3.94585057078933,2.24274819065968,4.63283773279873,3.88902376688095,4.1331143512874,5.23763989021412,2.58185925020659,7.29144555126121,11.2199498535511,2.17425708743405,3.16833006883652,0,0.405450430580328,0.513554785824136,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0,0.302899349844443,0.0762068066549998,0.504130925684203,0.0974578807397524,0,0.350630706544707,18.3651610728321,1.33191572024439,0.358855426437903,0,0.386379188064381,0.563047426353546,4.57879060668163,0.643105137237198,0,6.7770221114048,8.74617949363636,8.59343270159095,5.32744865265431,6.16574267793578,6.0431511791176,6.75022500231806,3.60256962579376,6.34399372577886,9.83744592328458,0.62272408550506,1.99512436700516,2.04880326904961,2.91728060481953,2.51535795153579,6.98605332110054,6.00066165064361,5.56294654545014,5.77654577265267,5.81203587056734,4.81610669791456,6.22466926574051,3.7456602987953,5.31408764960415,5.22662767496081,6.66811167796303,6.48952225291191,5.78727661391115,7.00546031365621,6.18235464564469,5.14303878578123,4.08194354166476,3.33810665926249,4.50573891560218,5.36423468367385,5.753793336634,6.40247905054704,4.20911538300549,4.6173398707593,2.80571135828869,5.21994079746366,5.02372860115374,5.32000356120596,3.71848418846318,6.36591816237767,5.49583271463481,5.38042699424439,4.08255002691767,5.35607329792761,5.29419405886837,4.63735671240843 | |phase1_expression=1.60148847104794,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0.333109761815663,0,0,0.157731082679119,0,0,3.57181818634493,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0.288851619751275,0.831173226792462,0.204169356262369,0,0,0,0,0,0,0,0,0,1.56478268869608,2.8343270329458,0.659058548203415,0.194429899074283,0.279972843250725,2.87505128729943,0,0,0,0,0.573066879877513,3.09403255366465,2.22548106945558,1.5869729378161,0.633831403506179,0,0,0,0,0,4.19440154725767,1.92109152660777,0.311068836925433,0.540023753326763,0.630974884054146,11.7116903605559,9.718215801871,0.244981598429908,0.191690942036473,0,7.70811166995721,12.1302971180928,9.83081812839958,1.45074916503213,0.914876436024097,1.04182674111352,14.5175159480718,5.6276261003168,8.25110537994775,9.1334861496837,7.68807076315156,8.38797506213853,0,0.0755715601067855,0.579728977403356,1.72084775396277,0,0,0,0,10.8142203501449,0,0,0,0.985903938436763,0,0,0,0,0.253359865475099,0.505524445014783,1.1418387971906,0,0.742210695324124,1.21439728736295,1.21786191324856,1.15307748628029,1.05505848386836,1.99900802130698,1.13099932196708,0.494389935468748,0.578397427679647,3.5384422077995,7.117741397686,5.07935492458905,1.45462575940567,1.86391761218122,13.4679166625312,10.6817820474862,0,0,0,0,14.8292733010774,12.3525162761029,1.00523481690292,5.38855392596057,5.37002460393694,13.714010940931,8.27430441645564,5.09196819251581,2.48813941220186,0,1.47309299120532,1.17108398666433,3.90833577536904,2.16074555766419,2.71268672104287,1.29269348387523,1.15302348256365,1.96773621575431,1.81092359517311,0.862271971731369,1.70195472151037,1.93546236580344,4.60311038097907,3.61461423993277,2.43776516565517,2.26360350048738,3.38358253591438,0,0,0,1.86413195281952,2.81431271977315,2.52086886045421,1.65721314909647,4.52557733019029,3.39387648352232,4.65067889500816,11.8040296615832,10.2753501283109,19.7471819896177,21.5059377943615,43.4528819165787,42.251796365921,48.3010253640311,40.5303384656323,7.78072809687271,0.720332286654991,0.330418782983798,0,0.426576501070468,0.232236671860439,1.15980715189884,1.21010114774006,2.00140239460383,3.23383564391351,0,4.6115707322723,4.77536896720512,3.58121649674071,7.01870713628832,0,0.216138049874694,0.398282546508734,0.379335801906163,1.48523066392647,1.1270773567308,1.62921062276251,1.55161989734101,1.26244475802573,1.58091342810643,1.03327103585722,1.255989822731,1.1105744752962,0,0.333690211432188,0.393117990226406,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0,0,0,0,0.744281895337007,0.624075346229121,0.505157755894224,1.25578189465339,0,0.739012760666419,1.13694847062291,0.814824882210129,0.339490171550376,0.704070744865506,1.17254380209271,1.90434912708811,0.780534591431195,2.99506773801763,3.5434350343804,3.6674596791222,1.80249646187312,1.03610989119537,0.433947175744535,0,0,0.491764273019036,0.275936746304732,12.5229460190478,12.8932855251423,0.163934945376675,12.876017287423,0,0,0,0,0,0,0,0,0,13.1741739732941,2.98074178937364,6.94455854302295,6.67836533349662,7.09371528781903,0,1.69946445308487,1.81394134178851,0.754420319023592,2.36241514304618,1.84461088766356,1.29214146584111,2.90826983582004,2.13898427030833,0,1.05418608574999,0,1.70219802876894,0.720244376125241,0.646793418913773,1.28602221018955,1.41872186913819,1.60531935841864,2.30368628842969,0.608929898229199,0,2.75381692122966,0,1.6488625294148,1.45317984026315,1.14594557363496,0.716234064018819,0.984845398470368,1.1659233465194,11.1255181206306,0.170870880797853,1.857481811669,1.29636169158798,0.565105371014073,0.27338845544205,0.228778173206523,0,0,0,1.90934123603023,1.26534397432454,1.42323626988794,0.756037385752609,1.04544148007234,0.87345025498471,1.34864346384821,0.909188012978695,0.523511883968059,1.29614973291793,15.5334828271731,3.94585057078933,2.24274819065968,4.63283773279873,3.88902376688095,4.1331143512874,5.23763989021412,2.58185925020659,7.29144555126121,11.2199498535511,2.17425708743405,3.16833006883652,0,0.405450430580328,0.513554785824136,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0,0.302899349844443,0.0762068066549998,0.504130925684203,0.0974578807397524,0,0.350630706544707,18.3651610728321,1.33191572024439,0.358855426437903,0,0.386379188064381,0.563047426353546,4.57879060668163,0.643105137237198,0,6.7770221114048,8.74617949363636,8.59343270159095,5.32744865265431,6.16574267793578,6.0431511791176,6.75022500231806,3.60256962579376,6.34399372577886,9.83744592328458,0.62272408550506,1.99512436700516,2.04880326904961,2.91728060481953,2.51535795153579,6.98605332110054,6.00066165064361,5.56294654545014,5.77654577265267,5.81203587056734,4.81610669791456,6.22466926574051,3.7456602987953,5.31408764960415,5.22662767496081,6.66811167796303,6.48952225291191,5.78727661391115,7.00546031365621,6.18235464564469,5.14303878578123,4.08194354166476,3.33810665926249,4.50573891560218,5.36423468367385,5.753793336634,6.40247905054704,4.20911538300549,4.6173398707593,2.80571135828869,5.21994079746366,5.02372860115374,5.32000356120596,3.71848418846318,6.36591816237767,5.49583271463481,5.38042699424439,4.08255002691767,5.35607329792761,5.29419405886837,4.63735671240843 | ||
|short_description=p1@Fndc5 | |short_description=p1@Fndc5 | ||
}} | }} |
Latest revision as of 09:13, 26 September 2015
Short description: | p1@Fndc5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fndc5_5end |
Coexpression cluster: | MCL_coexpression_mm9:697 |
Association with transcript: | -95bp_to_ENSMUST00000102600_5end |
EntrezGene: | Fndc5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.40e-10 | 92 |
regional part of nervous system | 3.67e-08 | 54 |
posterior neural tube | 2.64e-07 | 12 |
chordal neural plate | 2.64e-07 | 12 |
neural tube | 2.79e-07 | 52 |
neural rod | 2.79e-07 | 52 |
future spinal cord | 2.79e-07 | 52 |
neural keel | 2.79e-07 | 52 |