FFCP PHASE1:Mm9::chr16:13924080..13924085,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=637 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:13924080..13924085,+ | |||
|description=CAGE_peak_at_chr16:13924080..13924085,+ | |description=CAGE_peak_at_chr16:13924080..13924085,+ | ||
|id=chr16:13924080..13924085,+ | |id=chr16:13924080..13924085,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.65e-08,5;CL:0002321,3.60e-08,70;CL:0000540,2.86e-07,33;CL:0000047,2.86e-07,33;CL:0000031,2.86e-07,33;CL:0000404,2.86e-07,33;CL:0002614,7.27e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.90e-08!73;UBERON:0005743!1.90e-08!73;UBERON:0000073!2.85e-08!75;UBERON:0001016!2.85e-08!75 | |ontology_enrichment_uberon=UBERON:0001017!1.90e-08!73;UBERON:0005743!1.90e-08!73;UBERON:0000073!2.85e-08!75;UBERON:0001016!2.85e-08!75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.23e-10,10;UBERON:0000411,1.23e-10,10;UBERON:0001950,1.23e-10,10;UBERON:0001017,1.48e-10,73;UBERON:0001016,3.32e-10,75;UBERON:0002020,5.46e-09,34;UBERON:0003528,1.98e-08,29;UBERON:0002791,1.98e-08,29;UBERON:0001893,1.98e-08,29;UBERON:0000073,6.52e-08,54;UBERON:0004121,1.64e-07,95;UBERON:0000924,1.64e-07,95;UBERON:0006601,1.64e-07,95;UBERON:0002038,7.27e-07,3;UBERON:0009663,7.27e-07,3;UBERON:0009661,7.27e-07,3;UBERON:0000125,7.27e-07,3;UBERON:0002308,7.27e-07,3;UBERON:0000956,8.58e-07,21;UBERON:0001869,8.58e-07,21;UBERON:0000203,8.58e-07,21 | |||
|phase1_expression=0,0,0,0.30246421130683,2.00358291978539,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0.157731082679119,0.274228867211478,0,0.0850432901510698,0.297872853602656,0,0,0.68822784320151,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0.782391344348039,0,0.219686182734472,0,0,0,0,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0,0,0.988866362566974,0.7104801149461,1.19840044207362,0,0.103689612308478,0,0.210324961351382,0.856952953211411,0,0.122490799214954,0.0958454710182364,0,9.91042928994498,1.40456071893706,0.921639199537461,0,0,0,0.279182999001381,11.2552522006336,1.98637722109853,9.1334861496837,0.854230084794618,0.559198337475902,0.151452386666368,0,0,0.860423876981386,0,17.2705021324101,5.19821133958135,1.34408066129201,0,0,0,0.35333957451034,0,0,0,0,0.432982082022428,0.506719730950197,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0,0.251333182659351,0.247194967734374,0,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0.599162557619291,0,0.125654352112864,1.04294592115366,0.255715457330331,0,0,0,0,0,0.631325567659422,0,0.229902104433473,0,0.150704817835715,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0.180062061461015,0.473489471170421,0.196764231747404,0,0,0,0,0.329119699826961,0.656669856316381,0.0810688095458557,0.292399974850665,0,0.402619256281115,0.210289948564127,0,0.330418782983798,0,0.213288250535234,0.464473343720877,0,0,0.22237804384487,0,0.474529061544512,0,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0.379335801906163,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0.590440591918409,0.156998727841375,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0.575392274901621,0.324270453550071,0.274561413188081,4.31304619582064,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0.390267295715598,0,0,0.159454768657487,0.327726629431476,0,0,1.50791283939272,0.54390568381871,0,0.275936746304732,0.481651769963376,0.117211686592203,0.327869890753351,0,1.26203287766503,0.390438744296638,0.430846795465598,1.43381278771531,0.222798674082394,0,0.809621403349789,1.16902343164525,0.790575555893047,0,0.567760340833074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0.129358683782755,0,0.532020700926821,0.178368817602071,0,0,0,0,0.441056796109924,0,0,0.0603129249281559,0,0,0,0.370850604021019,0,0,0,0,0,0.228778173206523,0,0,0,0,0.158167996790568,0.406638934253697,0.108005340821801,0,0,0.269728692769641,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0,0.39736270956253,0.240390899039938,0,0,0,0.201652370273681,0,0.0962118416403295,0.233753804363138,0.226730383615211,0,0.269141569828427,0,0.386379188064381,0.187682475451182,0,0.643105137237198,0,2.82375921308533,1.38097570952153,2.86447756719698,0.515559547031063,0.685082519770642,0.755393897389701,2.02506750069542,0,1.81256963593682,0.51776031175182,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0.818462086339379,0,0,0,0.467863216890817,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0.30246421130683,2.00358291978539,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0.157731082679119,0.274228867211478,0,0.0850432901510698,0.297872853602656,0,0,0.68822784320151,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0.782391344348039,0,0.219686182734472,0,0,0,0,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0,0,0.988866362566974,0.7104801149461,1.19840044207362,0,0.103689612308478,0,0.210324961351382,0.856952953211411,0,0.122490799214954,0.0958454710182364,0,9.91042928994498,1.40456071893706,0.921639199537461,0,0,0,0.279182999001381,11.2552522006336,1.98637722109853,9.1334861496837,0.854230084794618,0.559198337475902,0.151452386666368,0,0,0.860423876981386,0,17.2705021324101,5.19821133958135,1.34408066129201,0,0,0,0.35333957451034,0,0,0,0,0.432982082022428,0.506719730950197,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0,0.251333182659351,0.247194967734374,0,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0,0,0,0,0.599162557619291,0,0.125654352112864,1.04294592115366,0.255715457330331,0,0,0,0,0,0.631325567659422,0,0.229902104433473,0,0.150704817835715,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0.180062061461015,0.473489471170421,0.196764231747404,0,0,0,0,0.329119699826961,0.656669856316381,0.0810688095458557,0.292399974850665,0,0.402619256281115,0.210289948564127,0,0.330418782983798,0,0.213288250535234,0.464473343720877,0,0,0.22237804384487,0,0.474529061544512,0,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0.379335801906163,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0.590440591918409,0.156998727841375,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0.575392274901621,0.324270453550071,0.274561413188081,4.31304619582064,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0.390267295715598,0,0,0.159454768657487,0.327726629431476,0,0,1.50791283939272,0.54390568381871,0,0.275936746304732,0.481651769963376,0.117211686592203,0.327869890753351,0,1.26203287766503,0.390438744296638,0.430846795465598,1.43381278771531,0.222798674082394,0,0.809621403349789,1.16902343164525,0.790575555893047,0,0.567760340833074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0.129358683782755,0,0.532020700926821,0.178368817602071,0,0,0,0,0.441056796109924,0,0,0.0603129249281559,0,0,0,0.370850604021019,0,0,0,0,0,0.228778173206523,0,0,0,0,0.158167996790568,0.406638934253697,0.108005340821801,0,0,0.269728692769641,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0,0.39736270956253,0.240390899039938,0,0,0,0.201652370273681,0,0.0962118416403295,0.233753804363138,0.226730383615211,0,0.269141569828427,0,0.386379188064381,0.187682475451182,0,0.643105137237198,0,2.82375921308533,1.38097570952153,2.86447756719698,0.515559547031063,0.685082519770642,0.755393897389701,2.02506750069542,0,1.81256963593682,0.51776031175182,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0.818462086339379,0,0,0,0.467863216890817,0,0,0,0.231867835620421 | ||
|short_description=p@chr16:13924080..13924085,+ | |short_description=p@chr16:13924080..13924085,+ | ||
}} | }} |
Latest revision as of 01:35, 6 August 2015
Short description: | p@chr16:13924080..13924085, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:13924080..13924085, + |
Coexpression cluster: | MCL_coexpression_mm9:637 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.65e-08 | 5 |
embryonic cell | 3.60e-08 | 70 |
neuron | 2.86e-07 | 33 |
neuronal stem cell | 2.86e-07 | 33 |
neuroblast | 2.86e-07 | 33 |
electrically signaling cell | 2.86e-07 | 33 |
neuron of the substantia nigra | 7.27e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.23e-10 | 10 |
visual cortex | 1.23e-10 | 10 |
neocortex | 1.23e-10 | 10 |
central nervous system | 1.48e-10 | 73 |
nervous system | 3.32e-10 | 75 |
gray matter | 5.46e-09 | 34 |
brain grey matter | 1.98e-08 | 29 |
regional part of telencephalon | 1.98e-08 | 29 |
telencephalon | 1.98e-08 | 29 |
regional part of nervous system | 6.52e-08 | 54 |
ectoderm-derived structure | 1.64e-07 | 95 |
ectoderm | 1.64e-07 | 95 |
presumptive ectoderm | 1.64e-07 | 95 |
substantia nigra | 7.27e-07 | 3 |
telencephalic nucleus | 7.27e-07 | 3 |
midbrain nucleus | 7.27e-07 | 3 |
neural nucleus | 7.27e-07 | 3 |
nucleus of brain | 7.27e-07 | 3 |
cerebral cortex | 8.58e-07 | 21 |
cerebral hemisphere | 8.58e-07 | 21 |
pallium | 8.58e-07 | 21 |