FFCP PHASE1:Hg19::chr3:65459310..65459316,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0002568,8.75e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.92e-08;3!UBERON:0000358;3.61e-07;1 | |ontology_enrichment_development_v019=UBERON:0006215;3.92e-08;3!UBERON:0000358;3.61e-07;1 | ||
|ontology_enrichment_disease=DOID:0050687!7.73e-07!143 | |ontology_enrichment_disease=DOID:0050687!7.73e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:1036;9.52e-07;8 | |ontology_enrichment_disease_v019=DOID:1036;9.52e-07;8 | ||
|ontology_enrichment_disease_v019_2=DOID:3571,8.27e-07,1;DOID:1036,8.91e-07,8;DOID:3371,9.25e-07,1;DOID:4549,9.25e-07,1;DOID:5861,9.25e-07,1;DOID:6496,9.25e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!8.13e-09!94;UBERON:0001016!8.13e-09!94;UBERON:0001017!1.49e-08!82;UBERON:0005743!5.99e-08!86;UBERON:0007023!7.15e-08!115;UBERON:0002346!4.12e-07!90;UBERON:0001049!4.13e-07!57;UBERON:0005068!4.13e-07!57;UBERON:0006241!4.13e-07!57;UBERON:0007135!4.13e-07!57;UBERON:0003075!7.70e-07!86;UBERON:0007284!7.70e-07!86;UBERON:0000924!9.90e-07!173;UBERON:0006601!9.90e-07!173 | |ontology_enrichment_uberon=UBERON:0000073!8.13e-09!94;UBERON:0001016!8.13e-09!94;UBERON:0001017!1.49e-08!82;UBERON:0005743!5.99e-08!86;UBERON:0007023!7.15e-08!115;UBERON:0002346!4.12e-07!90;UBERON:0001049!4.13e-07!57;UBERON:0005068!4.13e-07!57;UBERON:0006241!4.13e-07!57;UBERON:0007135!4.13e-07!57;UBERON:0003075!7.70e-07!86;UBERON:0007284!7.70e-07!86;UBERON:0000924!9.90e-07!173;UBERON:0006601!9.90e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.92e-08;3!UBERON:0004054;3.92e-08;3!UBERON:0007029;3.61e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0006947;3.92e-08;3!UBERON:0004054;3.92e-08;3!UBERON:0007029;3.61e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.06e-08,3;UBERON:0004054,3.06e-08,3;UBERON:0007029,3.73e-07,1;UBERON:0001000,6.99e-07,1;UBERON:0005352,6.99e-07,1 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0.572471974262113,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.43917392846563,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775250277507987,0,0.66944122552934,0.402829317109147,0,0,0,0,0.714397826272638,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.264818361626438,0.573673241497627,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.298897361103602,0,0,0.421352420106746,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0.336672227908132,0.125118519871964,0,0.438977620880838,0,0,0,0.717558542755448,0,0,0.600182192168805,0.309157587715317,1.03056216018252,0,1.18143432568886,0.194874010322397,0.757301322732344,0.184099797284599,0.161646056818812,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0.232387885739037,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,1.96565443335525,2.36315962672562,0,0,0.171567810298526,0,0,0,0.277765335475589,0,0,0,0.34779121492523,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,1.42198887333556,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0.599837947092342,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0.179060963239896,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920771839728375,0,0.512556597022804,0,0.804269605718038,0,0.154209693802656,0,0.164254312027618,0,0,0.241718899183244,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0.082509499920588,0,0,0,0.096670718292122,0,0.614014698904518,0.137836572484531,0.107420244868274,0.290033387828457,0.0852266274161009,0.178064071293475,0,0.192190067365106,0.255225424989168,0,0,0.94443704049192,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.719489830333259,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0.293016358543788,0.121360521749513,0.780103689942349,0,0,0,0,0,0.422008249231538,0,0,0,0.796991953004279,0,0.755798243562828,0.409074730008619,0,0.311039587661807,0.359473404589307,0,0,0.0986434056369336,0,1.11136990144637,0,0.278304294485554,0,1.04171104434093,0.0874599999961957,0,0,0,0,0,1.16641845353302,0.173624994933292,0,0.120596438625408,1.52581736317083,0.552896299656123,1.18219047581419,0.219385397153973,0.21787692703798,0.557694977114413,0.153900517007594,0,0,0.269272933229316,0.434589487688032,0,0,0.533034776018635,0,0,0.831058409500782,0.451191321234361,0.392125068635479,0.167821586975843,2.65655225813859,1.90723894776454,0.421996129056054,0.326465616318295,0.848118428603645,0,0.995261931078505,0.0884575645033392,0,1.18608451472249,0.494255755786011,0.208843899010911,0.337005664903385,0.802577647298789,0.234264445725339,0,0.19566461893209,0,1.57833761139756,0,0.61214552326098,0.31593289814244,0,0.207376382794494,0,0,0,0,0,0.277349346026277,0.347119476670262,0,0.0870592065804026,0.34945333648406,0,0,0,0.164230914106418,0.0969890164884194,1.412098027064,0,0.548167698587004,0,0.50648636764703,0,0.0801588202515337,0.426905989478705,0,0.432271251462318,0.343609788497747,0.686379991447858,0.288109595976299,0.621262677827163,0,0,0,0,0,0,0,0,0.429765441419957,0.525774708558629,0.558564802544508,0.458320848023367,0,0.599037001496973,0.429226048136571,0,0.335917362433631,1.44119953416961,0,0.157566364614447,0.0824158583811665,0.13480708770837,0.0984274815147488,0,0.795229689809303,0.272406812223151,0.482259445395058,0.687697182986169,0.83088067605837,0.2249738915515,0.77380195455795,0.728994679896296,0,0.157611414598396,0.367182116944987,0.844802692155252,0.35857467866569,0.191915197319445,0,0,0,0,0,0,0,1.06720276974141,0.340776043570843,0,0.146552233678082,0,0.258565912723101,0.26446520348538,0.171086837884329,0,0.213574825135389,0.314408610199332,0.828478110694391,0,0,0,0,1.08803560673895,0.2506898940227,0.306345576763462,0,0.628216385000937,1.77213635993397,0.122026264901963,0.1251909307065,0,0.443716206147409,0.0620964029413835,0.553394539744923,0,0,0,0.470531639396343,0,0.28984205722165,0,0,0,0.189403005275089,0,0.889811221596536,0.228840068396924,0.151230923763239,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0.601030435988874,0,0,0.363697318405119,0.107410557042488,0,0.398095888698616,0.800055529326307,0,0,1.26184898228651,0.385239660814607,0.428883182749851,0,0,0,0,0.358177682162975,0,0.438568099157414,0.176689145945881,0,0.337884881306145,0,0,0,0.276516872303462,0.194860308839388,0.132864840313363,0.163565394255844,0.655219697692825,0.245772908753719,0,0,0.106691729694141,0,0,0.368211900503681,0,0,0.511577485214607,0.107824811396682,0.629063767423586,0.327628914576042,0.509197589862076,0,1.73510069962603,0,0.636008701306837,2.91788456504637,0,0,0,0.449604575675217,0,0.159633859057151,0.41023272848151,0,0.138314504928436,0.807378228159255,0,0.294443155503077,0.235939446695481,0.183428598521679,0,0.762764190934334,0,0,0.0752103283492573,0.20170506870352,0,0,0,0.147856086217045,0.472763092328763,0,0,0.317079050969534,1.64092442705466,0.548257766857182,0.992422356778588,0,0.127762427639595,0.535701835878287,0,0,0.455324382702595,0.0887023701626388,0,0.171488009437418,0.271878931907327,0.394636641377094,0.236387681767936,0.111231401892069,0.078493092850514,0.471346769748006,0.280272163313789,0,0,0,0.214429632529969,0.94808167039636,1.27865567904938,0.173858272302579,0,0.207216164163037,0,0,0.860454717640555,0,0.170426809518315,1.27016115057279,0,0,0,0.335566295393377,0,1.09726132484042,0,0.102662806856247,0,2.4285549652957,0,2.58636007709779,1.18920090777569,0.5647304101948,0.549702583727146,0.452888530700021,0.154348316215889,0.218559560503957,1.88126918544609,0,0.235676547101626,0,0,0.8453114551668,0.169927114687817,0.0939839179798536,0.644578879735772,0,0,0,0.160482733378337,1.46067277649303,0,0.143339583151451,0.473314686579554,0.135982980381829,0,2.1161073620616,0,0,0,0.378499274505237,0,0.633492505057185,0.407955318967927,0.26721740526556,0,0.250707539292375,0.0757786982182394,0,0,0.310298987585686,0,1.66645102024618,0,0.124149428591716,0,0.0636471582781649,0.606351566874658,0.653150243690884,0.684466602170562,0.0673520530145875,0,0.99798106963804,0.0814032686109745,0.106727345877715,0,0.538951212639521,2.34640942403454,0.244482888365733,0.813792356631477,0,0,0 | |phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0.572471974262113,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.43917392846563,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775250277507987,0,0.66944122552934,0.402829317109147,0,0,0,0,0.714397826272638,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.264818361626438,0.573673241497627,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.298897361103602,0,0,0.421352420106746,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0.336672227908132,0.125118519871964,0,0.438977620880838,0,0,0,0.717558542755448,0,0,0.600182192168805,0.309157587715317,1.03056216018252,0,1.18143432568886,0.194874010322397,0.757301322732344,0.184099797284599,0.161646056818812,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0.232387885739037,0.10366105501537,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,1.96565443335525,2.36315962672562,0,0,0.171567810298526,0,0,0,0.277765335475589,0,0,0,0.34779121492523,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,1.42198887333556,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0.599837947092342,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0.179060963239896,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920771839728375,0,0.512556597022804,0,0.804269605718038,0,0.154209693802656,0,0.164254312027618,0,0,0.241718899183244,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0.082509499920588,0,0,0,0.096670718292122,0,0.614014698904518,0.137836572484531,0.107420244868274,0.290033387828457,0.0852266274161009,0.178064071293475,0,0.192190067365106,0.255225424989168,0,0,0.94443704049192,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.719489830333259,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0.293016358543788,0.121360521749513,0.780103689942349,0,0,0,0,0,0.422008249231538,0,0,0,0.796991953004279,0,0.755798243562828,0.409074730008619,0,0.311039587661807,0.359473404589307,0,0,0.0986434056369336,0,1.11136990144637,0,0.278304294485554,0,1.04171104434093,0.0874599999961957,0,0,0,0,0,1.16641845353302,0.173624994933292,0,0.120596438625408,1.52581736317083,0.552896299656123,1.18219047581419,0.219385397153973,0.21787692703798,0.557694977114413,0.153900517007594,0,0,0.269272933229316,0.434589487688032,0,0,0.533034776018635,0,0,0.831058409500782,0.451191321234361,0.392125068635479,0.167821586975843,2.65655225813859,1.90723894776454,0.421996129056054,0.326465616318295,0.848118428603645,0,0.995261931078505,0.0884575645033392,0,1.18608451472249,0.494255755786011,0.208843899010911,0.337005664903385,0.802577647298789,0.234264445725339,0,0.19566461893209,0,1.57833761139756,0,0.61214552326098,0.31593289814244,0,0.207376382794494,0,0,0,0,0,0.277349346026277,0.347119476670262,0,0.0870592065804026,0.34945333648406,0,0,0,0.164230914106418,0.0969890164884194,1.412098027064,0,0.548167698587004,0,0.50648636764703,0,0.0801588202515337,0.426905989478705,0,0.432271251462318,0.343609788497747,0.686379991447858,0.288109595976299,0.621262677827163,0,0,0,0,0,0,0,0,0.429765441419957,0.525774708558629,0.558564802544508,0.458320848023367,0,0.599037001496973,0.429226048136571,0,0.335917362433631,1.44119953416961,0,0.157566364614447,0.0824158583811665,0.13480708770837,0.0984274815147488,0,0.795229689809303,0.272406812223151,0.482259445395058,0.687697182986169,0.83088067605837,0.2249738915515,0.77380195455795,0.728994679896296,0,0.157611414598396,0.367182116944987,0.844802692155252,0.35857467866569,0.191915197319445,0,0,0,0,0,0,0,1.06720276974141,0.340776043570843,0,0.146552233678082,0,0.258565912723101,0.26446520348538,0.171086837884329,0,0.213574825135389,0.314408610199332,0.828478110694391,0,0,0,0,1.08803560673895,0.2506898940227,0.306345576763462,0,0.628216385000937,1.77213635993397,0.122026264901963,0.1251909307065,0,0.443716206147409,0.0620964029413835,0.553394539744923,0,0,0,0.470531639396343,0,0.28984205722165,0,0,0,0.189403005275089,0,0.889811221596536,0.228840068396924,0.151230923763239,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0.601030435988874,0,0,0.363697318405119,0.107410557042488,0,0.398095888698616,0.800055529326307,0,0,1.26184898228651,0.385239660814607,0.428883182749851,0,0,0,0,0.358177682162975,0,0.438568099157414,0.176689145945881,0,0.337884881306145,0,0,0,0.276516872303462,0.194860308839388,0.132864840313363,0.163565394255844,0.655219697692825,0.245772908753719,0,0,0.106691729694141,0,0,0.368211900503681,0,0,0.511577485214607,0.107824811396682,0.629063767423586,0.327628914576042,0.509197589862076,0,1.73510069962603,0,0.636008701306837,2.91788456504637,0,0,0,0.449604575675217,0,0.159633859057151,0.41023272848151,0,0.138314504928436,0.807378228159255,0,0.294443155503077,0.235939446695481,0.183428598521679,0,0.762764190934334,0,0,0.0752103283492573,0.20170506870352,0,0,0,0.147856086217045,0.472763092328763,0,0,0.317079050969534,1.64092442705466,0.548257766857182,0.992422356778588,0,0.127762427639595,0.535701835878287,0,0,0.455324382702595,0.0887023701626388,0,0.171488009437418,0.271878931907327,0.394636641377094,0.236387681767936,0.111231401892069,0.078493092850514,0.471346769748006,0.280272163313789,0,0,0,0.214429632529969,0.94808167039636,1.27865567904938,0.173858272302579,0,0.207216164163037,0,0,0.860454717640555,0,0.170426809518315,1.27016115057279,0,0,0,0.335566295393377,0,1.09726132484042,0,0.102662806856247,0,2.4285549652957,0,2.58636007709779,1.18920090777569,0.5647304101948,0.549702583727146,0.452888530700021,0.154348316215889,0.218559560503957,1.88126918544609,0,0.235676547101626,0,0,0.8453114551668,0.169927114687817,0.0939839179798536,0.644578879735772,0,0,0,0.160482733378337,1.46067277649303,0,0.143339583151451,0.473314686579554,0.135982980381829,0,2.1161073620616,0,0,0,0.378499274505237,0,0.633492505057185,0.407955318967927,0.26721740526556,0,0.250707539292375,0.0757786982182394,0,0,0.310298987585686,0,1.66645102024618,0,0.124149428591716,0,0.0636471582781649,0.606351566874658,0.653150243690884,0.684466602170562,0.0673520530145875,0,0.99798106963804,0.0814032686109745,0.106727345877715,0,0.538951212639521,2.34640942403454,0.244482888365733,0.813792356631477,0,0,0 | ||
|short_description=p@chr3:65459310..65459316,- | |short_description=p@chr3:65459310..65459316,- | ||
}} | }} |
Revision as of 05:31, 17 November 2012
Short description: | p@chr3:65459310..65459316, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:65459310..65459316, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of Wharton's jelly | 8.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.06e-08 | 3 |
internal male genitalia | 3.06e-08 | 3 |
surface | 3.73e-07 | 1 |
vas deferens | 6.99e-07 | 1 |
spermatic cord | 6.99e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 8.27e-07 | 1 |
chronic leukemia | 8.91e-07 | 8 |
chondrosarcoma | 9.25e-07 | 1 |
extraosseous chondrosarcoma | 9.25e-07 | 1 |
myxoid chondrosarcoma | 9.25e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 9.25e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.