FFCP PHASE1:Hg19::chr21:43816226..43816231,-: Difference between revisions
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|ontology_enrichment_celltype_v019=CL:0000077;3.63e-07;19 | |ontology_enrichment_celltype_v019=CL:0000077;3.63e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.88e-12,253;CL:0000077,3.73e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.54e-22;29 | |ontology_enrichment_development_v019=UBERON:0008947;4.54e-22;29 | ||
|ontology_enrichment_disease=DOID:305!3.93e-27!106;DOID:0050687!2.39e-17!143;DOID:162!8.23e-16!235;DOID:14566!3.26e-15!239;DOID:299!2.23e-08!25 | |ontology_enrichment_disease=DOID:305!3.93e-27!106;DOID:0050687!2.39e-17!143;DOID:162!8.23e-16!235;DOID:14566!3.26e-15!239;DOID:299!2.23e-08!25 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.84e-22,106;DOID:0050687,7.58e-16,143;DOID:162,3.17e-15,235;DOID:14566,7.81e-15,239 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001737;9.67e-74;9!UBERON:0001557;9.67e-74;9!UBERON:0000072;5.29e-16;37!UBERON:0000065;1.55e-13;44!UBERON:0004913;2.26e-09;1!UBERON:0003703;2.26e-09;1!UBERON:0001174;2.26e-09;1!UBERON:0004914;2.26e-09;1!UBERON:0001004;3.43e-07;65 | |ontology_enrichment_uberon_v019=UBERON:0001737;9.67e-74;9!UBERON:0001557;9.67e-74;9!UBERON:0000072;5.29e-16;37!UBERON:0000065;1.55e-13;44!UBERON:0004913;2.26e-09;1!UBERON:0003703;2.26e-09;1!UBERON:0001174;2.26e-09;1!UBERON:0004914;2.26e-09;1!UBERON:0001004;3.43e-07;65 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.31e-74,9;UBERON:0001557,1.28e-34,19;UBERON:0008947,1.11e-16,38;UBERON:0003258,1.11e-16,38;UBERON:0000072,3.09e-13,47;UBERON:0001041,6.60e-12,87;UBERON:0000065,2.38e-11,54;UBERON:0004913,2.46e-09,1;UBERON:0003703,2.46e-09,1;UBERON:0001174,2.46e-09,1;UBERON:0004914,2.46e-09,1;UBERON:0004921,3.73e-08,118;UBERON:0001004,6.32e-08,74;UBERON:0001007,1.84e-07,145;UBERON:0001555,1.84e-07,145;UBERON:0007026,1.84e-07,145 | |||
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| ||
|short_description=p4@TMPRSS3 | |short_description=p4@TMPRSS3 | ||
}} | }} |
Revision as of 09:14, 17 November 2012
Short description: | p4@TMPRSS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TMPRSS3_5end |
Coexpression cluster: | C2633_smallcell_Hep2_gall_cervical_splenic_mesothelioma_serous |
Association with transcript: | -26bp_to_ENST00000398397, NM_024022, NM_032405, uc002zbb.2, uc002zbc.2, uc002zbd.2_5end |
EntrezGene: | TMPRSS3 |
HGNC: | 11877 |
UniProt: | P57727 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.88e-12 | 253 |
mesothelial cell | 3.73e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.31e-74 | 9 |
upper respiratory tract | 1.28e-34 | 19 |
respiratory primordium | 1.11e-16 | 38 |
endoderm of foregut | 1.11e-16 | 38 |
segment of respiratory tract | 3.09e-13 | 47 |
foregut | 6.60e-12 | 87 |
respiratory tract | 2.38e-11 | 54 |
hepatopancreatic ampulla | 2.46e-09 | 1 |
extrahepatic bile duct | 2.46e-09 | 1 |
common bile duct | 2.46e-09 | 1 |
duodenal papilla | 2.46e-09 | 1 |
subdivision of digestive tract | 3.73e-08 | 118 |
respiratory system | 6.32e-08 | 74 |
digestive system | 1.84e-07 | 145 |
digestive tract | 1.84e-07 | 145 |
primitive gut | 1.84e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.84e-22 | 106 |
cell type cancer | 7.58e-16 | 143 |
cancer | 3.17e-15 | 235 |
disease of cellular proliferation | 7.81e-15 | 239 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.