FFCP PHASE1:Hg19::chr5:135540733..135540788,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002319!1.82e-42!25;CL:0000128!3.86e-42!7;CL:0000126!3.86e-42!7;CL:0000127!3.86e-42!7;CL:0002453!3.86e-42!7;CL:0000047!6.83e-37!8;CL:0002605!4.81e-36!3;CL:0000540!2.95e-18!6;CL:0000031!2.95e-18!6;CL:0000404!2.95e-18!6;CL:0000133!3.74e-18!59;CL:0000243!2.15e-17!15;CL:0000125!2.15e-17!15;CL:0000030!2.15e-17!15;CL:0000339!2.15e-17!15;CL:0000095!1.46e-15!17;CL:0000123!1.46e-15!17;CL:0000221!5.76e-15!71;CL:0002568!1.09e-12!1;CL:0000333!8.02e-07!41 | |ontology_enrichment_celltype=CL:0002319!1.82e-42!25;CL:0000128!3.86e-42!7;CL:0000126!3.86e-42!7;CL:0000127!3.86e-42!7;CL:0002453!3.86e-42!7;CL:0000047!6.83e-37!8;CL:0002605!4.81e-36!3;CL:0000540!2.95e-18!6;CL:0000031!2.95e-18!6;CL:0000404!2.95e-18!6;CL:0000133!3.74e-18!59;CL:0000243!2.15e-17!15;CL:0000125!2.15e-17!15;CL:0000030!2.15e-17!15;CL:0000339!2.15e-17!15;CL:0000095!1.46e-15!17;CL:0000123!1.46e-15!17;CL:0000221!5.76e-15!71;CL:0002568!1.09e-12!1;CL:0000333!8.02e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0002605;3.01e-59;3!CL:0002319;1.50e-58;25!CL:0000128;2.10e-45;7!CL:0000126;2.10e-45;7!CL:0000127;2.10e-45;7!CL:0000047;8.98e-41;2!CL:0000540;5.32e-30;6!CL:0000404;5.32e-30;6!CL:0000243;5.06e-19;15!CL:0000125;5.06e-19;15!CL:0000095;4.54e-17;17 | |ontology_enrichment_celltype_v019=CL:0002605;3.01e-59;3!CL:0002319;1.50e-58;25!CL:0000128;2.10e-45;7!CL:0000126;2.10e-45;7!CL:0000127;2.10e-45;7!CL:0000047;8.98e-41;2!CL:0000540;5.32e-30;6!CL:0000404;5.32e-30;6!CL:0000243;5.06e-19;15!CL:0000125;5.06e-19;15!CL:0000095;4.54e-17;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.25e-61,8;CL:0002605,2.23e-59,3;CL:0002319,1.50e-58,25;CL:0000128,1.77e-45,7;CL:0000126,1.77e-45,7;CL:0000127,1.77e-45,7;CL:0002453,1.77e-45,7;CL:0000540,6.18e-30,6;CL:0000031,6.18e-30,6;CL:0000404,6.18e-30,6;CL:0000133,8.03e-26,59;CL:0000221,3.09e-21,72;CL:0000243,4.71e-19,15;CL:0000125,4.71e-19,15;CL:0000030,4.71e-19,15;CL:0000339,4.71e-19,15;CL:0000095,4.27e-17,17;CL:0000123,4.27e-17,17;CL:0000333,9.40e-08,41 | |||
|ontology_enrichment_development_v019=CL:0000031;5.32e-30;6!CL:0000133;2.07e-19;59!CL:0000339;5.06e-19;15!CL:0000221;3.00e-09;72 | |ontology_enrichment_development_v019=CL:0000031;5.32e-30;6!CL:0000133;2.07e-19;59!CL:0000339;5.06e-19;15!CL:0000221;3.00e-09;72 | ||
|ontology_enrichment_disease=DOID:3493!4.69e-07!2 | |ontology_enrichment_disease=DOID:3493!4.69e-07!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.44e-15!82;UBERON:0005743!8.52e-15!86;UBERON:0000073!2.74e-13!94;UBERON:0001016!2.74e-13!94;UBERON:0004121!3.01e-08!169;UBERON:0000924!5.06e-08!173;UBERON:0006601!5.06e-08!173;UBERON:0001905!4.98e-07!2;UBERON:0002757!4.98e-07!2;UBERON:0010134!4.98e-07!2;UBERON:0002784!4.98e-07!2;UBERON:0005408!4.98e-07!2;UBERON:0001899!4.98e-07!2 | |ontology_enrichment_uberon=UBERON:0001017!1.44e-15!82;UBERON:0005743!8.52e-15!86;UBERON:0000073!2.74e-13!94;UBERON:0001016!2.74e-13!94;UBERON:0004121!3.01e-08!169;UBERON:0000924!5.06e-08!173;UBERON:0006601!5.06e-08!173;UBERON:0001905!4.98e-07!2;UBERON:0002757!4.98e-07!2;UBERON:0010134!4.98e-07!2;UBERON:0002784!4.98e-07!2;UBERON:0005408!4.98e-07!2;UBERON:0001899!4.98e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.85e-07;25!UBERON:0000203;1.85e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0000956;1.85e-07;25!UBERON:0000203;1.85e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.71e-19,81;UBERON:0001016,5.12e-17,89;UBERON:0004121,8.77e-09,171;UBERON:0000924,8.77e-09,171;UBERON:0006601,8.77e-09,171;UBERON:0000956,1.79e-07,25;UBERON:0000203,1.79e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61560529038394,0,0,3.14859585844162,5.88560027813402,1.75759695432724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.35236560556159,6.50699269288109,1.54657762555539,5.69555302136786,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,110.143371054821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,7.98932087508899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61560529038394,0,0,3.14859585844162,5.88560027813402,1.75759695432724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.35236560556159,6.50699269288109,1.54657762555539,5.69555302136786,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,110.143371054821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,7.98932087508899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:135540733..135540788,- | |short_description=p@chr5:135540733..135540788,- | ||
}} | }} |
Revision as of 03:50, 18 November 2012
Short description: | p@chr5:135540733..135540788, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:135540733..135540788, - |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.25e-61 | 8 |
astrocyte of the cerebral cortex | 2.23e-59 | 3 |
neural cell | 1.50e-58 | 25 |
oligodendrocyte | 1.77e-45 | 7 |
macroglial cell | 1.77e-45 | 7 |
astrocyte | 1.77e-45 | 7 |
oligodendrocyte precursor cell | 1.77e-45 | 7 |
neuron | 6.18e-30 | 6 |
neuroblast | 6.18e-30 | 6 |
electrically signaling cell | 6.18e-30 | 6 |
neurectodermal cell | 8.03e-26 | 59 |
ectodermal cell | 3.09e-21 | 72 |
glial cell (sensu Vertebrata) | 4.71e-19 | 15 |
glial cell | 4.71e-19 | 15 |
glioblast | 4.71e-19 | 15 |
glioblast (sensu Vertebrata) | 4.71e-19 | 15 |
neuron associated cell | 4.27e-17 | 17 |
neuron associated cell (sensu Vertebrata) | 4.27e-17 | 17 |
migratory neural crest cell | 9.40e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.71e-19 | 81 |
nervous system | 5.12e-17 | 89 |
ectoderm-derived structure | 8.77e-09 | 171 |
ectoderm | 8.77e-09 | 171 |
presumptive ectoderm | 8.77e-09 | 171 |
cerebral cortex | 1.79e-07 | 25 |
pallium | 1.79e-07 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.