FFCP PHASE1:Hg19::chr20:6056533..6056539,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.76e-19!254;CL:0000223!2.49e-17!59;CL:0002076!6.82e-17!43;CL:0002251!1.59e-13!21 | |ontology_enrichment_celltype=CL:0000066!1.76e-19!254;CL:0000223!2.49e-17!59;CL:0002076!6.82e-17!43;CL:0002251!1.59e-13!21 | ||
|ontology_enrichment_celltype_v019=CL:0002621;1.59e-21;3!CL:0002231;3.63e-21;3!CL:0002327;2.44e-16;4!CL:0000362;6.32e-16;9!CL:0000312;4.12e-13;5!CL:0002076;5.83e-13;42!CL:0000240;4.37e-11;6!CL:0000311;4.37e-11;6!CL:0000079;4.37e-11;6!CL:0000237;4.37e-11;6!CL:0002159;1.84e-10;14!CL:0000317;4.01e-09;2!CL:1000448;4.01e-09;2!CL:0002308;4.01e-09;2!CL:0002140;4.01e-09;2 | |ontology_enrichment_celltype_v019=CL:0002621;1.59e-21;3!CL:0002231;3.63e-21;3!CL:0002327;2.44e-16;4!CL:0000362;6.32e-16;9!CL:0000312;4.12e-13;5!CL:0002076;5.83e-13;42!CL:0000240;4.37e-11;6!CL:0000311;4.37e-11;6!CL:0000079;4.37e-11;6!CL:0000237;4.37e-11;6!CL:0002159;1.84e-10;14!CL:0000317;4.01e-09;2!CL:1000448;4.01e-09;2!CL:0002308;4.01e-09;2!CL:0002140;4.01e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.17e-21,3;CL:0002231,2.41e-21,3;CL:0002327,2.64e-16,4;CL:0000362,5.72e-16,9;CL:0000312,3.43e-13,5;CL:0002076,7.46e-13,42;CL:0000240,3.75e-11,6;CL:0000311,3.75e-11,6;CL:0000079,3.75e-11,6;CL:0000237,3.75e-11,6;CL:0000036,3.75e-11,6;CL:0000357,3.75e-11,6;CL:0000114,3.75e-11,6;CL:0002159,1.73e-10,14;CL:0000223,3.05e-09,58;CL:0000317,4.34e-09,2;CL:1000448,4.34e-09,2;CL:0002308,4.34e-09,2;CL:0002140,4.34e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000357;4.37e-11;6!CL:0000114;4.37e-11;6 | |ontology_enrichment_development_v019=CL:0000357;4.37e-11;6!CL:0000114;4.37e-11;6 | ||
|ontology_enrichment_disease=DOID:305!4.09e-17!106;DOID:0050687!1.21e-13!143;DOID:1749!3.03e-13!14 | |ontology_enrichment_disease=DOID:305!4.09e-17!106;DOID:0050687!1.21e-13!143;DOID:1749!3.03e-13!14 | ||
|ontology_enrichment_disease_v019=DOID:3151;1.65e-16;1!DOID:3149;1.65e-16;1!DOID:3451;6.42e-09;2!DOID:4159;6.42e-09;2!DOID:0060122;6.42e-09;2 | |ontology_enrichment_disease_v019=DOID:3151;1.65e-16;1!DOID:3149;1.65e-16;1!DOID:3451;6.42e-09;2!DOID:4159;6.42e-09;2!DOID:0060122;6.42e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,1.93e-16,1;DOID:3149,1.93e-16,1;DOID:3451,6.94e-09,2;DOID:4159,6.94e-09,2;DOID:0060122,6.94e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.06e-13!169;UBERON:0000925!6.06e-13!169;UBERON:0006595!6.06e-13!169;UBERON:0001007!3.52e-09!155;UBERON:0001555!3.52e-09!155;UBERON:0007026!3.52e-09!155;UBERON:0000344!5.66e-09!12;UBERON:0003729!3.79e-08!5;UBERON:0000161!1.49e-07!35;UBERON:0004921!5.65e-07!129;UBERON:0004185!5.65e-07!129 | |ontology_enrichment_uberon=UBERON:0004119!6.06e-13!169;UBERON:0000925!6.06e-13!169;UBERON:0006595!6.06e-13!169;UBERON:0001007!3.52e-09!155;UBERON:0001555!3.52e-09!155;UBERON:0007026!3.52e-09!155;UBERON:0000344!5.66e-09!12;UBERON:0003729!3.79e-08!5;UBERON:0000161!1.49e-07!35;UBERON:0004921!5.65e-07!129;UBERON:0004185!5.65e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.59e-21;3!UBERON:0001911;2.44e-16;4!UBERON:0010371;2.16e-12;31!UBERON:0001003;8.39e-10;15!UBERON:0007376;8.39e-10;15!UBERON:0003929;8.72e-10;7!UBERON:0002419;4.01e-09;2!UBERON:0007771;4.01e-09;2!UBERON:0003297;4.01e-09;2!UBERON:0001821;4.01e-09;2!UBERON:0003487;4.01e-09;2!UBERON:0001820;4.01e-09;2!UBERON:0003350;1.13e-08;8!UBERON:0001828;1.13e-08;8 | |ontology_enrichment_uberon_v019=UBERON:0001949;1.59e-21;3!UBERON:0001911;2.44e-16;4!UBERON:0010371;2.16e-12;31!UBERON:0001003;8.39e-10;15!UBERON:0007376;8.39e-10;15!UBERON:0003929;8.72e-10;7!UBERON:0002419;4.01e-09;2!UBERON:0007771;4.01e-09;2!UBERON:0003297;4.01e-09;2!UBERON:0001821;4.01e-09;2!UBERON:0003487;4.01e-09;2!UBERON:0001820;4.01e-09;2!UBERON:0003350;1.13e-08;8!UBERON:0001828;1.13e-08;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.17e-21,3;UBERON:0001911,2.64e-16,4;UBERON:0005333,2.64e-16,4;UBERON:0008425,2.64e-16,4;UBERON:0005311,2.64e-16,4;UBERON:0001003,7.90e-10,15;UBERON:0007376,7.90e-10,15;UBERON:0007383,7.90e-10,15;UBERON:0003102,2.82e-09,99;UBERON:0002419,4.34e-09,2;UBERON:0007771,4.34e-09,2;UBERON:0003297,4.34e-09,2;UBERON:0001821,4.34e-09,2;UBERON:0003487,4.34e-09,2;UBERON:0001820,4.34e-09,2;UBERON:0005089,4.34e-09,2;UBERON:0005088,4.34e-09,2;UBERON:0003350,1.01e-08,8;UBERON:0001828,1.01e-08,8;UBERON:0000076,1.26e-08,8;UBERON:0000161,3.88e-07,36;UBERON:0005153,6.57e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,3.54569956768085,0.573609190778008,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0,0,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,1.42675371031213,0,1.50793458617446,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.425325291727159,2.7763142037883,1.16253575405585,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0,0,1.80455823272956,1.38121483403844,0,0,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,2.29706215198469,0.650060246036521,0,0,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0,0.826424576804891,1.15314040419064,1.14851441245126,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0.86101074534246,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0.568272293612826,0,0,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0,0,0,0.179736702294654,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0.520855522170466,0,0,0.568967241427498,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0.611030144933625,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0.485560759068186,0.394584402849391,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0.435296032902013,0,0,0.290268993867255,0.219267951258557,0,0.0969890164884194,0,0,0.137041924646751,0,0,0.782205530939212,0,0,0,0.144090417154106,0,0,0.288109595976299,0.124252535565433,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.709048640765013,0.412079291905832,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0,0,0,1.34173875039706,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0.37494122388632,0,0.285465333544967,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0.213383459388282,0,0,0,0.419638523158333,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0.161475645631851,0,0.392590874004102,0.11796972334774,0.550285795565037,0.693153996902029,0,0,0.198916222116275,0,0,0,0.261906694481422,0,0.295712172434091,0,0,0,0.0634158101939068,0,0,0.496211178389294,0.351742488719241,0.511049710558381,0,0,0,0,0,0,0,0.0679697329768317,0,0,0.444925607568277,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0.348724276104376,0,0,0.207216164163037,0.3414369541879,0,0,0.473328002922261,0,0,0.22910686854405,0,0,0,0.196300467230486,0.121917924982269,0,0,0,0.971421986118279,0,0,0,0.11294608203896,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0.0802413666891683,0,0,0.286679166302903,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244209805832924,0,0,0.179650404213174,0,0,0,0,0,0 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| ||
|short_description=p@chr20:6056533..6056539,- | |short_description=p@chr20:6056533..6056539,- | ||
}} | }} |
Revision as of 10:03, 19 November 2012
Short description: | p@chr20:6056533..6056539, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:6056533..6056539, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.17e-21 | 3 |
epithelial cell of prostate | 2.41e-21 | 3 |
mammary gland epithelial cell | 2.64e-16 | 4 |
epidermal cell | 5.72e-16 | 9 |
keratinocyte | 3.43e-13 | 5 |
endo-epithelial cell | 7.46e-13 | 42 |
stratified squamous epithelial cell | 3.75e-11 | 6 |
keratin accumulating cell | 3.75e-11 | 6 |
stratified epithelial cell | 3.75e-11 | 6 |
keratinizing barrier epithelial cell | 3.75e-11 | 6 |
epithelial fate stem cell | 3.75e-11 | 6 |
stratified epithelial stem cell | 3.75e-11 | 6 |
surface ectodermal cell | 3.75e-11 | 6 |
general ecto-epithelial cell | 1.73e-10 | 14 |
endodermal cell | 3.05e-09 | 58 |
sebum secreting cell | 4.34e-09 | 2 |
epithelial cell of sweat gland | 4.34e-09 | 2 |
epithelial cell of skin gland | 4.34e-09 | 2 |
acinar cell of sebaceous gland | 4.34e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.17e-21 | 3 |
mammary gland | 2.64e-16 | 4 |
mammary bud | 2.64e-16 | 4 |
mammary ridge | 2.64e-16 | 4 |
mammary placode | 2.64e-16 | 4 |
skin epidermis | 7.90e-10 | 15 |
outer epithelium | 7.90e-10 | 15 |
enveloping layer of ectoderm | 7.90e-10 | 15 |
surface structure | 2.82e-09 | 99 |
skin gland | 4.34e-09 | 2 |
epidermis gland | 4.34e-09 | 2 |
gland of integumental system | 4.34e-09 | 2 |
sebaceous gland | 4.34e-09 | 2 |
skin sebaceous gland | 4.34e-09 | 2 |
sweat gland | 4.34e-09 | 2 |
sweat gland placode | 4.34e-09 | 2 |
sebaceous gland placode | 4.34e-09 | 2 |
epithelium of mucosa | 1.01e-08 | 8 |
gingiva | 1.01e-08 | 8 |
external ectoderm | 1.26e-08 | 8 |
orifice | 3.88e-07 | 36 |
epithelial bud | 6.57e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.93e-16 | 1 |
keratoacanthoma | 1.93e-16 | 1 |
skin carcinoma | 6.94e-09 | 2 |
skin cancer | 6.94e-09 | 2 |
integumentary system cancer | 6.94e-09 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.