FFCP PHASE1:Hg19::chr14:52021357..52021368,+: Difference between revisions
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|ontology_enrichment_celltype_v019=CL:0002541;1.24e-08;3!CL:0000077;2.09e-07;19!CL:0000319;7.08e-07;1 | |ontology_enrichment_celltype_v019=CL:0002541;1.24e-08;3!CL:0000077;2.09e-07;19!CL:0000319;7.08e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,9.09e-09,3;CL:0000077,1.75e-07,19;CL:0000319,6.49e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0007123;5.36e-11;5 | |ontology_enrichment_development_v019=UBERON:0007123;5.36e-11;5 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:201;1.87e-09;6!DOID:0060100;1.87e-09;6!DOID:3111;1.64e-07;1!DOID:3603;1.64e-07;1!DOID:0060085;2.59e-07;1!DOID:3165;2.59e-07;1!DOID:0060121;2.59e-07;1!DOID:2438;2.59e-07;1!DOID:4418;2.59e-07;1!DOID:1115;2.70e-07;20!DOID:3347;3.60e-07;1!DOID:3030;7.08e-07;1!DOID:3112;7.08e-07;1 | |ontology_enrichment_disease_v019=DOID:201;1.87e-09;6!DOID:0060100;1.87e-09;6!DOID:3111;1.64e-07;1!DOID:3603;1.64e-07;1!DOID:0060085;2.59e-07;1!DOID:3165;2.59e-07;1!DOID:0060121;2.59e-07;1!DOID:2438;2.59e-07;1!DOID:4418;2.59e-07;1!DOID:1115;2.70e-07;20!DOID:3347;3.60e-07;1!DOID:3030;7.08e-07;1!DOID:3112;7.08e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:201,1.72e-09,6;DOID:0060100,1.72e-09,6;DOID:3111,1.65e-07,1;DOID:3603,1.65e-07,1;DOID:1115,2.59e-07,20;DOID:0060085,2.84e-07,1;DOID:3165,2.84e-07,1;DOID:0060121,2.84e-07,1;DOID:2438,2.84e-07,1;DOID:4418,2.84e-07,1;DOID:3347,3.01e-07,1;DOID:3112,4.85e-07,1;DOID:3030,6.49e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000490!6.41e-07!138 | |ontology_enrichment_uberon=UBERON:0000490!6.41e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;5.36e-11;5!UBERON:0003124;1.24e-08;3!UBERON:0000920;1.24e-08;3!UBERON:0007195;7.08e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0002046;5.36e-11;5!UBERON:0003124;1.24e-08;3!UBERON:0000920;1.24e-08;3!UBERON:0007195;7.08e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,4.36e-11,5;UBERON:0004117,4.36e-11,5;UBERON:0007689,4.36e-11,5;UBERON:0007123,4.36e-11,5;UBERON:0003091,4.36e-11,5;UBERON:0000920,9.09e-09,3;UBERON:0007195,9.18e-07,1 | |||
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| ||
|short_description=p13@FRMD6 | |short_description=p13@FRMD6 | ||
}} | }} |
Revision as of 22:41, 19 November 2012
Short description: | p13@FRMD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_FRMD6_5end |
Coexpression cluster: | C2298_pagetoid_liposarcoma_mesothelioma_mucinous_epidermoid_large_bile |
Association with transcript: | -9bp_to_ENST00000555952_5end |
EntrezGene: | FRMD6 |
HGNC: | 19839 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 9.09e-09 | 3 |
mesothelial cell | 1.75e-07 | 19 |
mucus secreting cell | 6.49e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 4.36e-11 | 5 |
pharyngeal pouch | 4.36e-11 | 5 |
thyroid diverticulum | 4.36e-11 | 5 |
pharyngeal pouch 2 | 4.36e-11 | 5 |
thyroid primordium | 4.36e-11 | 5 |
egg chorion | 9.09e-09 | 3 |
stroma of bone marrow | 9.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
connective tissue cancer | 1.72e-09 | 6 |
musculoskeletal system cancer | 1.72e-09 | 6 |
cystadenocarcinoma | 1.65e-07 | 1 |
mucinous cystadenocarcinoma | 1.65e-07 | 1 |
sarcoma | 2.59e-07 | 20 |
organ system benign neoplasm | 2.84e-07 | 1 |
skin benign neoplasm | 2.84e-07 | 1 |
integumentary system benign neoplasm | 2.84e-07 | 1 |
dermis tumor | 2.84e-07 | 1 |
cutaneous fibrous histiocytoma | 2.84e-07 | 1 |
osteosarcoma | 3.01e-07 | 1 |
papillary adenocarcinoma | 4.85e-07 | 1 |
mucinous adenocarcinoma | 6.49e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.