FFCP PHASE1:Hg19::chr5:35048047..35048059,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000181!6.08e-18!12;CL:0000417!6.08e-18!12;CL:0000668!6.08e-18!12;CL:0000414!6.08e-18!12;CL:0000412!6.08e-18!12;CL:0000182!6.08e-18!12 | |ontology_enrichment_celltype=CL:0000181!6.08e-18!12;CL:0000417!6.08e-18!12;CL:0000668!6.08e-18!12;CL:0000414!6.08e-18!12;CL:0000412!6.08e-18!12;CL:0000182!6.08e-18!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;9.76e-09;12 | |ontology_enrichment_celltype_v019=CL:0000182;9.76e-09;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.76e-09,12 | |||
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|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@AGXT2 | |short_description=p1@AGXT2 | ||
}} | }} |
Revision as of 07:03, 20 November 2012
Short description: | p1@AGXT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AGXT2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -7bp_to_ENST00000510428_5end |
EntrezGene: | AGXT2 |
HGNC: | 14412 |
UniProt: | E9PDL7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.76e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.07e-20 | 17 |
small intestine | 2.32e-19 | 4 |
epithelium of foregut-midgut junction | 4.75e-15 | 25 |
anatomical boundary | 4.75e-15 | 25 |
hepatobiliary system | 4.75e-15 | 25 |
foregut-midgut junction | 4.75e-15 | 25 |
septum transversum | 4.75e-15 | 25 |
abdomen element | 9.01e-15 | 54 |
abdominal segment element | 9.01e-15 | 54 |
liver | 3.54e-14 | 19 |
digestive gland | 3.54e-14 | 19 |
liver bud | 3.54e-14 | 19 |
gastrointestinal system | 6.49e-14 | 25 |
abdominal segment of trunk | 3.52e-13 | 60 |
abdomen | 3.52e-13 | 60 |
hepatic diverticulum | 3.13e-12 | 22 |
liver primordium | 3.13e-12 | 22 |
digestive tract diverticulum | 1.08e-11 | 23 |
epididymis | 1.47e-11 | 1 |
epithelial sac | 9.50e-11 | 25 |
sac | 2.49e-10 | 26 |
subdivision of digestive tract | 3.99e-09 | 118 |
gut epithelium | 5.35e-09 | 54 |
exocrine gland | 1.22e-08 | 31 |
exocrine system | 1.22e-08 | 31 |
digestive system | 1.38e-08 | 145 |
digestive tract | 1.38e-08 | 145 |
primitive gut | 1.38e-08 | 145 |
endocrine gland | 1.24e-07 | 35 |
endoderm-derived structure | 1.29e-07 | 160 |
endoderm | 1.29e-07 | 160 |
presumptive endoderm | 1.29e-07 | 160 |
trunk region element | 2.39e-07 | 101 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.