FFCP PHASE1:Hg19::chr4:110723224..110723236,-: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000306;6.39e-10;4!CL:0002222;6.39e-10;4!CL:0002224;6.39e-10;4!CL:0000064;5.26e-08;3!CL:0000067;5.26e-08;3!CL:0005012;5.26e-08;3!CL:0002304;5.26e-08;3!CL:0002605;3.21e-07;3 | |ontology_enrichment_celltype_v019=CL:0000306;6.39e-10;4!CL:0002222;6.39e-10;4!CL:0002224;6.39e-10;4!CL:0000064;5.26e-08;3!CL:0000067;5.26e-08;3!CL:0005012;5.26e-08;3!CL:0002304;5.26e-08;3!CL:0002605;3.21e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000306,5.20e-10,4;CL:0002222,5.20e-10,4;CL:0002224,5.20e-10,4;CL:0000064,5.30e-08,3;CL:0000067,5.30e-08,3;CL:0005012,5.30e-08,3;CL:0002304,5.30e-08,3;CL:0002605,4.31e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.06e-17!115;UBERON:0003075!1.85e-13!86;UBERON:0007284!1.85e-13!86;UBERON:0000483!2.04e-12!309;UBERON:0000119!2.22e-12!312;UBERON:0002346!3.99e-12!90;UBERON:0000477!4.84e-11!286;UBERON:0004111!1.34e-10!241;UBERON:0000481!2.91e-09!347;UBERON:0000025!1.11e-08!194;UBERON:0000467!4.30e-08!625;UBERON:0000480!5.40e-08!626;UBERON:0001049!9.14e-08!57;UBERON:0005068!9.14e-08!57;UBERON:0006241!9.14e-08!57;UBERON:0007135!9.14e-08!57;UBERON:0005743!1.48e-07!86;UBERON:0007625!1.51e-07!11;UBERON:0003103!2.10e-07!69;UBERON:0001017!3.51e-07!82;UBERON:0003056!3.73e-07!61;UBERON:0002368!5.23e-07!35;UBERON:0000073!7.22e-07!94;UBERON:0001016!7.22e-07!94;UBERON:0005172!8.99e-07!55;UBERON:0005173!8.99e-07!55 | |ontology_enrichment_uberon=UBERON:0007023!2.06e-17!115;UBERON:0003075!1.85e-13!86;UBERON:0007284!1.85e-13!86;UBERON:0000483!2.04e-12!309;UBERON:0000119!2.22e-12!312;UBERON:0002346!3.99e-12!90;UBERON:0000477!4.84e-11!286;UBERON:0004111!1.34e-10!241;UBERON:0000481!2.91e-09!347;UBERON:0000025!1.11e-08!194;UBERON:0000467!4.30e-08!625;UBERON:0000480!5.40e-08!626;UBERON:0001049!9.14e-08!57;UBERON:0005068!9.14e-08!57;UBERON:0006241!9.14e-08!57;UBERON:0007135!9.14e-08!57;UBERON:0005743!1.48e-07!86;UBERON:0007625!1.51e-07!11;UBERON:0003103!2.10e-07!69;UBERON:0001017!3.51e-07!82;UBERON:0003056!3.73e-07!61;UBERON:0002368!5.23e-07!35;UBERON:0000073!7.22e-07!94;UBERON:0001016!7.22e-07!94;UBERON:0005172!8.99e-07!55;UBERON:0005173!8.99e-07!55 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;6.24e-16;11!UBERON:0000019;3.55e-10;19!UBERON:0000047;3.55e-10;19!UBERON:0004088;3.55e-10;19!UBERON:0010230;3.55e-10;19!UBERON:0000488;3.63e-10;4!UBERON:0010077;6.39e-10;4!UBERON:0005389;6.39e-10;4!UBERON:0000484;6.39e-10;4!UBERON:0000965;6.39e-10;4!UBERON:0001803;6.39e-10;4!UBERON:0001801;9.19e-10;14!UBERON:0000970;1.49e-09;20!UBERON:0002104;5.46e-09;21!UBERON:0001456;5.46e-09;21!UBERON:0000020;5.18e-08;23!UBERON:0001778;5.26e-08;3!UBERON:0001775;5.26e-08;3!UBERON:0001032;1.38e-07;24!UBERON:0004456;1.38e-07;24!UBERON:0004151;3.21e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0007625;6.24e-16;11!UBERON:0000019;3.55e-10;19!UBERON:0000047;3.55e-10;19!UBERON:0004088;3.55e-10;19!UBERON:0010230;3.55e-10;19!UBERON:0000488;3.63e-10;4!UBERON:0010077;6.39e-10;4!UBERON:0005389;6.39e-10;4!UBERON:0000484;6.39e-10;4!UBERON:0000965;6.39e-10;4!UBERON:0001803;6.39e-10;4!UBERON:0001801;9.19e-10;14!UBERON:0000970;1.49e-09;20!UBERON:0002104;5.46e-09;21!UBERON:0001456;5.46e-09;21!UBERON:0000020;5.18e-08;23!UBERON:0001778;5.26e-08;3!UBERON:0001775;5.26e-08;3!UBERON:0001032;1.38e-07;24!UBERON:0004456;1.38e-07;24!UBERON:0004151;3.21e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,4.76e-16,11;UBERON:0000488,3.79e-10,4;UBERON:0010077,5.20e-10,4;UBERON:0005389,5.20e-10,4;UBERON:0000484,5.20e-10,4;UBERON:0002546,5.20e-10,4;UBERON:0000965,5.20e-10,4;UBERON:0001803,5.20e-10,4;UBERON:0003073,5.20e-10,4;UBERON:0005426,5.20e-10,4;UBERON:0001801,8.42e-10,14;UBERON:0000019,1.11e-09,20;UBERON:0000047,1.11e-09,20;UBERON:0010312,1.11e-09,20;UBERON:0004088,1.11e-09,20;UBERON:0010230,1.11e-09,20;UBERON:0003072,1.11e-09,20;UBERON:0004128,1.11e-09,20;UBERON:0003071,1.11e-09,20;UBERON:0000970,4.11e-09,21;UBERON:0002104,4.11e-09,21;UBERON:0001456,1.36e-08,22;UBERON:0001048,3.12e-08,160;UBERON:0001778,5.30e-08,3;UBERON:0001775,5.30e-08,3;UBERON:0000020,1.09e-07,24;UBERON:0001032,1.09e-07,24;UBERON:0004456,1.09e-07,24;UBERON:0007023,1.14e-07,114;UBERON:0004151,2.75e-07,3 | |||
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| ||
|short_description=p4@CFI | |short_description=p4@CFI | ||
}} | }} |
Revision as of 20:38, 20 November 2012
Short description: | p4@CFI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CFI_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -17bp_to_ENST00000394635_5end |
EntrezGene: | CFI |
HGNC: | 5394 |
UniProt: | E7ETH0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 5.20e-10 | 4 |
vertebrate lens cell | 5.20e-10 | 4 |
lens epithelial cell | 5.20e-10 | 4 |
ciliated cell | 5.30e-08 | 3 |
ciliated epithelial cell | 5.30e-08 | 3 |
multi-ciliated epithelial cell | 5.30e-08 | 3 |
non-pigmented ciliary epithelial cell | 5.30e-08 | 3 |
astrocyte of the cerebral cortex | 4.31e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 4.76e-16 | 11 |
atypical epithelium | 3.79e-10 | 4 |
cuboidal epithelium | 5.20e-10 | 4 |
transparent eye structure | 5.20e-10 | 4 |
simple cuboidal epithelium | 5.20e-10 | 4 |
cranial placode | 5.20e-10 | 4 |
lens of camera-type eye | 5.20e-10 | 4 |
epithelium of lens | 5.20e-10 | 4 |
lens placode | 5.20e-10 | 4 |
lens vesicle | 5.20e-10 | 4 |
anterior segment of eyeball | 8.42e-10 | 14 |
camera-type eye | 1.11e-09 | 20 |
simple eye | 1.11e-09 | 20 |
immature eye | 1.11e-09 | 20 |
ocular region | 1.11e-09 | 20 |
eyeball of camera-type eye | 1.11e-09 | 20 |
optic cup | 1.11e-09 | 20 |
optic vesicle | 1.11e-09 | 20 |
eye primordium | 1.11e-09 | 20 |
eye | 4.11e-09 | 21 |
visual system | 4.11e-09 | 21 |
face | 1.36e-08 | 22 |
primordium | 3.12e-08 | 160 |
ciliary epithelium | 5.30e-08 | 3 |
ciliary body | 5.30e-08 | 3 |
sense organ | 1.09e-07 | 24 |
sensory system | 1.09e-07 | 24 |
entire sense organ system | 1.09e-07 | 24 |
adult organism | 1.14e-07 | 114 |
cardiac chamber | 2.75e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.