FFCP PHASE1:Hg19::chr1:62661968..62661996,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002322!1.11e-52!5;CL:0000039!9.38e-25!7;CL:0000586!9.38e-25!7;CL:0002537!6.31e-19!5;CL:0000540!1.90e-16!6;CL:0000031!1.90e-16!6;CL:0000404!1.90e-16!6;CL:0000047!1.74e-12!8;CL:0000148!3.87e-10!10;CL:0000541!3.87e-10!10;CL:0000147!2.20e-07!14 | |ontology_enrichment_celltype=CL:0002322!1.11e-52!5;CL:0000039!9.38e-25!7;CL:0000586!9.38e-25!7;CL:0002537!6.31e-19!5;CL:0000540!1.90e-16!6;CL:0000031!1.90e-16!6;CL:0000404!1.90e-16!6;CL:0000047!1.74e-12!8;CL:0000148!3.87e-10!10;CL:0000541!3.87e-10!10;CL:0000147!2.20e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.57e-70;5!CL:0000039;5.69e-33;7!CL:0000586;5.69e-33;7!CL:0002321;1.37e-23;15!CL:0000540;8.59e-22;6!CL:0000404;8.59e-22;6!CL:0000148;2.25e-13;10!CL:0000147;1.01e-09;14!CL:0000710;5.80e-07;20 | |ontology_enrichment_celltype_v019=CL:0002322;2.57e-70;5!CL:0000039;5.69e-33;7!CL:0000586;5.69e-33;7!CL:0002321;1.37e-23;15!CL:0000540;8.59e-22;6!CL:0000404;8.59e-22;6!CL:0000148;2.25e-13;10!CL:0000147;1.01e-09;14!CL:0000710;5.80e-07;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.39e-70,5;CL:0000039,5.46e-33,7;CL:0000586,5.46e-33,7;CL:0000540,8.90e-22,6;CL:0000031,8.90e-22,6;CL:0000404,8.90e-22,6;CL:0000047,1.65e-16,8;CL:0000148,2.16e-13,10;CL:0000541,2.16e-13,10;CL:0000147,9.81e-10,14;CL:0000133,4.37e-08,59;CL:0000710,5.68e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.25e-23;10!UBERON:0005564;3.25e-23;10!CL:0000031;8.59e-22;6 | |ontology_enrichment_development_v019=UBERON:0009117;3.25e-23;10!UBERON:0005564;3.25e-23;10!CL:0000031;8.59e-22;6 | ||
|ontology_enrichment_disease=DOID:3095!4.86e-17!22;DOID:2994!4.86e-17!22 | |ontology_enrichment_disease=DOID:3095!4.86e-17!22;DOID:2994!4.86e-17!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.46e-16;22!DOID:2994;2.46e-16;22 | |ontology_enrichment_disease_v019=DOID:3095;2.46e-16;22!DOID:2994;2.46e-16;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,2.42e-16,22;DOID:2994,2.42e-16,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.06e-21!8;UBERON:0003135!7.29e-16!11;UBERON:0000305!1.06e-13!7;UBERON:0000991!1.46e-12!21;UBERON:0009196!1.46e-12!21;UBERON:0009117!1.46e-12!21;UBERON:0005564!1.46e-12!21;UBERON:0004871!4.59e-12!8;UBERON:0004176!5.49e-12!22;UBERON:0003101!4.97e-08!22;UBERON:0000079!4.97e-08!22;UBERON:0005631!4.04e-07!14;UBERON:0000158!4.04e-07!14 | |ontology_enrichment_uberon=UBERON:0000473!1.06e-21!8;UBERON:0003135!7.29e-16!11;UBERON:0000305!1.06e-13!7;UBERON:0000991!1.46e-12!21;UBERON:0009196!1.46e-12!21;UBERON:0009117!1.46e-12!21;UBERON:0005564!1.46e-12!21;UBERON:0004871!4.59e-12!8;UBERON:0004176!5.49e-12!22;UBERON:0003101!4.97e-08!22;UBERON:0000079!4.97e-08!22;UBERON:0005631!4.04e-07!14;UBERON:0000158!4.04e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.56e-29;8!UBERON:0003135;3.85e-21;11!UBERON:0000922;3.08e-14;49!UBERON:0000991;3.14e-11;21!UBERON:0003101;9.90e-11;22!UBERON:0000079;9.90e-11;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;6.56e-29;8!UBERON:0003135;3.85e-21;11!UBERON:0000922;3.08e-14;49!UBERON:0000991;3.14e-11;21!UBERON:0003101;9.90e-11;22!UBERON:0000079;9.90e-11;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.33e-29,8;UBERON:0003135,3.75e-21,11;UBERON:0000991,3.10e-11,21;UBERON:0009196,3.10e-11,21;UBERON:0009117,3.10e-11,21;UBERON:0005564,3.10e-11,21;UBERON:0004176,9.78e-11,22;UBERON:0003101,9.78e-11,22;UBERON:0000079,9.78e-11,22 | |||
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|short_description=p@chr1:62661968..62661996,+ | |short_description=p@chr1:62661968..62661996,+ | ||
}} | }} |
Revision as of 10:18, 21 November 2012
Short description: | p@chr1:62661968..62661996, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:62661968..62661996, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.39e-70 | 5 |
germ line cell | 5.46e-33 | 7 |
germ cell | 5.46e-33 | 7 |
neuron | 8.90e-22 | 6 |
neuroblast | 8.90e-22 | 6 |
electrically signaling cell | 8.90e-22 | 6 |
neuronal stem cell | 1.65e-16 | 8 |
melanocyte | 2.16e-13 | 10 |
melanoblast | 2.16e-13 | 10 |
pigment cell | 9.81e-10 | 14 |
neurectodermal cell | 4.37e-08 | 59 |
neurecto-epithelial cell | 5.68e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
testis | 6.33e-29 | 8 |
male reproductive organ | 3.75e-21 | 11 |
gonad | 3.10e-11 | 21 |
indifferent external genitalia | 3.10e-11 | 21 |
indifferent gonad | 3.10e-11 | 21 |
gonad primordium | 3.10e-11 | 21 |
external genitalia | 9.78e-11 | 22 |
male organism | 9.78e-11 | 22 |
male reproductive system | 9.78e-11 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.42e-16 | 22 |
germ cell cancer | 2.42e-16 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.