FFCP PHASE1:Hg19::chr9:136739554..136739562,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!5.96e-41!254;CL:0002076!6.22e-16!43;CL:0000076!1.26e-13!62;CL:0000223!5.91e-11!59;CL:0002368!3.80e-10!13;CL:0000063!3.19e-09!578;CL:0000077!1.25e-07!19;CL:0000548!5.32e-07!679;CL:0000004!5.32e-07!679;CL:0000255!5.32e-07!679;CL:0000349!5.49e-07!3;CL:0002577!5.49e-07!3;CL:0000012!7.52e-07!682;CL:0002328!8.51e-07!3 | |ontology_enrichment_celltype=CL:0000066!5.96e-41!254;CL:0002076!6.22e-16!43;CL:0000076!1.26e-13!62;CL:0000223!5.91e-11!59;CL:0002368!3.80e-10!13;CL:0000063!3.19e-09!578;CL:0000077!1.25e-07!19;CL:0000548!5.32e-07!679;CL:0000004!5.32e-07!679;CL:0000255!5.32e-07!679;CL:0000349!5.49e-07!3;CL:0002577!5.49e-07!3;CL:0000012!7.52e-07!682;CL:0002328!8.51e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002577;9.76e-12;3!CL:0002328;2.57e-11;3!CL:0002368;8.58e-10;13!CL:1001319;6.21e-09;1!CL:1000600;6.21e-09;1!CL:0002252;6.21e-09;1!CL:0002076;9.09e-09;42!CL:0000244;1.57e-08;4!CL:0000731;1.57e-08;4!CL:0002202;2.94e-08;9!CL:0002632;2.94e-08;9!CL:0000312;3.97e-07;5!CL:0000349;7.09e-07;19 | |ontology_enrichment_celltype_v019=CL:0002577;9.76e-12;3!CL:0002328;2.57e-11;3!CL:0002368;8.58e-10;13!CL:1001319;6.21e-09;1!CL:1000600;6.21e-09;1!CL:0002252;6.21e-09;1!CL:0002076;9.09e-09;42!CL:0000244;1.57e-08;4!CL:0000731;1.57e-08;4!CL:0002202;2.94e-08;9!CL:0002632;2.94e-08;9!CL:0000312;3.97e-07;5!CL:0000349;7.09e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.31e-13,253;CL:0002577,9.78e-12,3;CL:0002328,3.09e-11,3;CL:0002076,1.56e-10,42;CL:0002368,1.03e-09,13;CL:0002252,5.75e-09,1;CL:1001319,6.22e-09,1;CL:1000600,6.22e-09,1;CL:0000244,1.52e-08,4;CL:0000731,1.52e-08,4;CL:0002202,3.64e-08,9;CL:0002632,3.64e-08,9;CL:0000223,2.46e-07,58;CL:0000312,4.43e-07,5;CL:0000349,7.79e-07,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!1.77e-24!106;DOID:0050687!2.66e-16!143;DOID:1749!4.81e-16!14;DOID:162!8.44e-16!235;DOID:14566!4.18e-15!239;DOID:120!4.82e-07!27 | |ontology_enrichment_disease=DOID:305!1.77e-24!106;DOID:0050687!2.66e-16!143;DOID:1749!4.81e-16!14;DOID:162!8.44e-16!235;DOID:14566!4.18e-15!239;DOID:120!4.82e-07!27 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!3.17e-15!9;UBERON:0004119!1.83e-14!169;UBERON:0000925!1.83e-14!169;UBERON:0006595!1.83e-14!169;UBERON:0003124!1.44e-12!7;UBERON:0000065!7.58e-12!53;UBERON:0001004!8.89e-12!72;UBERON:0005631!9.67e-12!14;UBERON:0000158!9.67e-12!14;UBERON:0008947!6.45e-11!38;UBERON:0003258!6.45e-11!38;UBERON:0000072!2.20e-09!46;UBERON:0003729!6.63e-09!5;UBERON:0001007!3.26e-08!155;UBERON:0001555!3.26e-08!155;UBERON:0007026!3.26e-08!155;UBERON:0001987!4.46e-08!4;UBERON:0004340!4.46e-08!4;UBERON:0003343!7.14e-08!4;UBERON:0004785!7.14e-08!4;UBERON:0000077!7.69e-08!130;UBERON:0001557!9.28e-08!19;UBERON:0003100!2.72e-07!41;UBERON:0004815!8.51e-07!3;UBERON:0002031!8.51e-07!3 | |ontology_enrichment_uberon=UBERON:0001737!3.17e-15!9;UBERON:0004119!1.83e-14!169;UBERON:0000925!1.83e-14!169;UBERON:0006595!1.83e-14!169;UBERON:0003124!1.44e-12!7;UBERON:0000065!7.58e-12!53;UBERON:0001004!8.89e-12!72;UBERON:0005631!9.67e-12!14;UBERON:0000158!9.67e-12!14;UBERON:0008947!6.45e-11!38;UBERON:0003258!6.45e-11!38;UBERON:0000072!2.20e-09!46;UBERON:0003729!6.63e-09!5;UBERON:0001007!3.26e-08!155;UBERON:0001555!3.26e-08!155;UBERON:0007026!3.26e-08!155;UBERON:0001987!4.46e-08!4;UBERON:0004340!4.46e-08!4;UBERON:0003343!7.14e-08!4;UBERON:0004785!7.14e-08!4;UBERON:0000077!7.69e-08!130;UBERON:0001557!9.28e-08!19;UBERON:0003100!2.72e-07!41;UBERON:0004815!8.51e-07!3;UBERON:0002031!8.51e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;3.03e-14;5!UBERON:0005910;5.78e-12;6!UBERON:0004815;2.57e-11;3!UBERON:0002031;2.57e-11;3!UBERON:0001987;5.11e-09;4!UBERON:0004645;6.21e-09;1!UBERON:0004913;6.21e-09;1!UBERON:0003703;6.21e-09;1!UBERON:0001256;6.21e-09;1!UBERON:0001259;6.21e-09;1!UBERON:0001174;6.21e-09;1!UBERON:0004914;6.21e-09;1!UBERON:0002185;3.97e-07;5!UBERON:0005911;7.36e-07;36 | |ontology_enrichment_uberon_v019=UBERON:0000365;3.03e-14;5!UBERON:0005910;5.78e-12;6!UBERON:0004815;2.57e-11;3!UBERON:0002031;2.57e-11;3!UBERON:0001987;5.11e-09;4!UBERON:0004645;6.21e-09;1!UBERON:0004913;6.21e-09;1!UBERON:0003703;6.21e-09;1!UBERON:0001256;6.21e-09;1!UBERON:0001259;6.21e-09;1!UBERON:0001174;6.21e-09;1!UBERON:0004914;6.21e-09;1!UBERON:0002185;3.97e-07;5!UBERON:0005911;7.36e-07;36 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.90e-14,5;UBERON:0005910,5.58e-12,6;UBERON:0004815,3.09e-11,3;UBERON:0002031,3.09e-11,3;UBERON:0003124,5.50e-11,7;UBERON:0005631,3.05e-09,14;UBERON:0000158,3.05e-09,14;UBERON:0004913,4.19e-09,1;UBERON:0003703,4.19e-09,1;UBERON:0001174,4.19e-09,1;UBERON:0004914,4.19e-09,1;UBERON:0001987,5.12e-09,4;UBERON:0004340,5.12e-09,4;UBERON:0004645,6.22e-09,1;UBERON:0001256,6.22e-09,1;UBERON:0001259,6.22e-09,1;UBERON:0004119,5.70e-08,160;UBERON:0000925,5.70e-08,160;UBERON:0006595,5.70e-08,160;UBERON:0002185,4.43e-07,5 | |||
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| ||
|short_description=p@chr9:136739554..136739562,+ | |short_description=p@chr9:136739554..136739562,+ | ||
}} | }} |
Revision as of 10:49, 21 November 2012
Short description: | p@chr9:136739554..136739562, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:136739554..136739562, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.31e-13 | 253 |
placental epithelial cell | 9.78e-12 | 3 |
bronchial epithelial cell | 3.09e-11 | 3 |
endo-epithelial cell | 1.56e-10 | 42 |
respiratory epithelial cell | 1.03e-09 | 13 |
epithelial cell of esophagus | 5.75e-09 | 1 |
bladder cell | 6.22e-09 | 1 |
lower urinary tract cell | 6.22e-09 | 1 |
transitional epithelial cell | 1.52e-08 | 4 |
urothelial cell | 1.52e-08 | 4 |
epithelial cell of tracheobronchial tree | 3.64e-08 | 9 |
epithelial cell of lower respiratory tract | 3.64e-08 | 9 |
endodermal cell | 2.46e-07 | 58 |
keratinocyte | 4.43e-07 | 5 |
extraembryonic cell | 7.79e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.90e-14 | 5 |
transitional epithelium | 5.58e-12 | 6 |
lower respiratory tract epithelium | 3.09e-11 | 3 |
epithelium of bronchus | 3.09e-11 | 3 |
chorion | 5.50e-11 | 7 |
extraembryonic membrane | 3.05e-09 | 14 |
membranous layer | 3.05e-09 | 14 |
hepatopancreatic ampulla | 4.19e-09 | 1 |
extrahepatic bile duct | 4.19e-09 | 1 |
common bile duct | 4.19e-09 | 1 |
duodenal papilla | 4.19e-09 | 1 |
placenta | 5.12e-09 | 4 |
allantois | 5.12e-09 | 4 |
urinary bladder urothelium | 6.22e-09 | 1 |
wall of urinary bladder | 6.22e-09 | 1 |
mucosa of urinary bladder | 6.22e-09 | 1 |
endoderm-derived structure | 5.70e-08 | 160 |
endoderm | 5.70e-08 | 160 |
presumptive endoderm | 5.70e-08 | 160 |
bronchus | 4.43e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.