Personal tools

Coexpression cluster:C3086: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 3: Line 3:
|full_id=C3086_Mesenchymal_Chondrocyte_Olfactory_Multipotent_aorta_colon_penis
|full_id=C3086_Mesenchymal_Chondrocyte_Olfactory_Multipotent_aorta_colon_penis
|id=C3086
|id=C3086
|ontology_enrichment_celltype=CL:0000055!1.85e-24!180;CL:0000057!4.77e-13!75;CL:0000192!2.38e-12!42;CL:0000514!2.38e-12!42;CL:0000680!2.71e-12!57;CL:0000056!2.71e-12!57;CL:0000355!2.71e-12!57;CL:0000183!9.34e-12!59;CL:0000393!9.48e-12!60;CL:0000211!9.48e-12!60;CL:0000187!2.89e-11!54;CL:0000359!4.56e-11!32
|ontology_enrichment_celltype=CL:0000057!1.22e-12!76;CL:0000359!5.99e-11!32;CL:0000192!1.28e-10!43;CL:0000514!1.28e-10!43;CL:0000183!1.10e-09!59;CL:0000393!1.94e-09!61;CL:0000211!1.94e-09!61;CL:0000680!2.52e-09!58;CL:0000056!2.52e-09!58;CL:0000355!2.52e-09!58;CL:0000055!3.13e-09!106;CL:0000187!9.20e-09!55
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0002385!4.87e-12!63;UBERON:0001015!4.87e-12!63;UBERON:0000383!4.87e-12!63;UBERON:0005256!1.24e-11!143;UBERON:0001134!2.06e-11!61;UBERON:0002036!2.06e-11!61;UBERON:0003082!2.06e-11!61;UBERON:0000468!1.22e-10!659;UBERON:0000914!1.29e-10!83;UBERON:0002329!1.29e-10!83;UBERON:0003077!1.29e-10!83;UBERON:0003059!1.29e-10!83;UBERON:0007282!1.29e-10!83;UBERON:0009618!1.29e-10!83;UBERON:0007285!1.29e-10!83;UBERON:0000486!1.97e-10!82;UBERON:0004290!5.42e-10!70;UBERON:0002049!1.20e-09!79;UBERON:0007798!1.20e-09!79;UBERON:0000475!1.67e-09!365;UBERON:0002100!3.81e-09!216;UBERON:0004872!6.12e-09!84;UBERON:0001981!1.42e-08!60;UBERON:0007500!1.42e-08!60;UBERON:0004537!1.42e-08!60;UBERON:0006965!1.42e-08!60;UBERON:0000467!2.13e-08!625;UBERON:0000480!3.08e-08!626;UBERON:0000481!4.65e-08!347;UBERON:0003914!6.10e-08!118;UBERON:0001637!1.25e-07!42;UBERON:0003509!1.25e-07!42;UBERON:0004572!1.25e-07!42;UBERON:0001009!2.56e-07!113;UBERON:0004535!2.60e-07!110;UBERON:0003104!4.65e-07!238;UBERON:0009142!4.65e-07!238;UBERON:0000490!4.68e-07!138;UBERON:0000055!7.66e-07!69
|ontology_enrichment_uberon=UBERON:0002385!2.29e-09!64;UBERON:0001015!2.29e-09!64;UBERON:0000383!2.29e-09!64;UBERON:0003104!5.73e-09!160;UBERON:0009142!5.73e-09!160;UBERON:0002049!8.92e-09!78;UBERON:0007798!8.92e-09!78;UBERON:0001134!1.51e-08!62;UBERON:0002036!1.51e-08!62;UBERON:0003082!1.51e-08!62;UBERON:0001009!1.13e-07!112;UBERON:0001637!1.37e-07!42;UBERON:0003509!1.37e-07!42;UBERON:0004572!1.37e-07!42;UBERON:0004535!2.27e-07!109;UBERON:0005256!3.35e-07!122;UBERON:0007524!5.02e-07!73;UBERON:0003688!5.82e-07!6;UBERON:0002358!5.82e-07!6;UBERON:0003684!5.82e-07!6;UBERON:0001178!5.82e-07!6;UBERON:0002100!7.49e-07!199;UBERON:0000468!7.84e-07!656;UBERON:0002329!9.02e-07!71;UBERON:0003059!9.02e-07!71;UBERON:0007282!9.02e-07!71;UBERON:0004290!9.02e-07!71;UBERON:0009618!9.02e-07!71;UBERON:0003914!9.08e-07!117
|tfbs_overrepresentation=0.147255,0.0586687,0.134243,0.0477154,0.199763,0.287811,0.0430074,0.414564,0.03272,0.0257057,0.139423,0.225367,0.188771,0.125978,0.148679,0.0619003,0.140982,0.0982016,0.0528514,0.108057,0.188635,0.132577,0.081977,0.0948982,0.0415721,0.215492,0.209392,0.0907212,0.143747,0.0933697,0.204953,0.114046,0.0180314,0.208242,0.0665252,0.0844722,0.688181,0.0429682,0.120351,0.0667043,0.0964797,0.0246116,0.140039,0.0180778,0.120917,0.0362416,0.0380166,0.18151,0.111283,0.121201,0.154071,0.0541794,0.0701653,0.0929951,0.198787,0.0384161,0.107455,0.212709,0.0783235,0.105572,0.0294301,0.149417,0.108602,0.0759481,0.054569,0.0504887,0.352278,0.0600088,0.0860723,0.167053,0.378921,0.067678,0.089036,0.119383,0.00747605,0.0171177,0.0964936,0.0436945,0.0372495,0.00725252,0.0956287,0.226912,0.0425,0.114846,0.291327,0.251834,0.064341,0.209032,0.608896,0.062747,0.0857568,0.0495878,0.0953825,0.0473737,0.0853887,0.115028,0.58489,0.153631,0.0927458,0.27413,0.0574857,0.0422457,0.141874,0.0370665,0.219088,0.0409286,0.0669887,0.338096,0.144217,0.269326,0.182599,0.0339971,0.149552,0.0176855,0.101221,0.0337525,0.0203386,0.0566549,0.139021,0.0838393,0.16671,0.214708,0.140123,0.0857827,0.102368,0.176912,0.0906875,0.0147934,0.0843604,0.134932,0.0595773,0.0748346,0.0572164,0.0227861,0.125792,0.108101,0.0648644,0.0553359,0.0330399,0.00395526,0.022776,0.127606,0.203923,0.155998,0.596561,0.0693171,0.0988228,0.0842275,0.0389418,0.120833,0.200647,0.143677,0.180712,0.0265818,0.0427088,0.117549,0.0747594,0.228385,0.0516985,0.0337251,0.227719,0.0952829,0.116642,0.147788,0.273479,0.114283,0.0400322,0.127369,0.0403542,0.312091,0.179689,0.137725,0.12972,0.0541353,0.0799324,0.090079,0.140334,0.181817,0.178449,0.0356339,0.158844,0.122474,0.0274061,0.115574,0.0737247,0.118847,0.183031,0.0401756,0.0828697,0.173562,0.107145,0.187297,0.122935,0.228812,0.112671,0.0470731,0.0782523,0.0602859,0.0676496,0.109673,0.0893019,0.060398,0.0308319,0.0606036,0.136451,0.259411,0.27358,0.15185,0.206299,0.178359,0.0458667,0.104357,0.121154,0.1129,0.312578,0.169057,0.164202,0.100942,0.062995,0.10299,0.0105855,0.37245,0.15606,0.161026,0.0738599,0.126611,0.138852,0.085973,0.060453,0.059896,0.0538541,0.384785,0.0418404,0.0765029,0.0959204,0.0931946,0.0472272,0.263087,0.163502,0.214803,0.182472,0.348993,0.0983991,0.0830921,0.116283,0.136838,0.0815104,0.111647,0.372804,0.117027,0.159052,0.185164,0.185743,0.0980288,0.0980899,0.159674,0.107242,0.201859,0.0695832,0.582402,0.0619218,0.1751,0.163376,0.128096,0.0345133,0.0810678,0.0811639,0.0920653,0.118078,0.0755168,0.278352,0.063292,0.254773,0.446759,0.0865903,0.0380459,0.130174,0.584917,0.0381789,3.18958e-05,0.635872,0.563047,0.517782,0.228731,0.335423,0.629514,0.261553,0.0222487,0.373681,0.00641099,0.49143,0.330703,0.395854,0.329568,0.042539,7.83499e-07,0.271958,0.292154,0.0159894,0.0921263,0.217139,0.597171,0.187251,0.362792,0.181715,0.423979,0.109988,0.330894,0.218329,0.427027,0.376924,0.463191,0.647576,0.173877,8.98016e-08,0.370782,0.415647,0.142924,0.253571,0.276829,0.301787,0.481778,0.316882,0.223503,0.503224,0.0669244,0.283727,0.314747,0.21363,0.291709,0.448095,0.576651,0.102333,0.292835,0.0280875,0.115044,0.373868,0.00194724,0.241757,0.18237,0.346458,0.513427,0.747852,0.275351,0.236471,0.185661,0.346319,0.0427964,0.270984,0.625945,0.000781971,0.513852,0.0389686,0.248634,0.281576,0.472384,0.163244,0.0670502,0.0730934,0.184794,0.230427,0.0582356,0.217247,0.412837,0.305671,0.546839,0.551561,0.448039,0.00208206,0.312808,0.695172,0.0451077,0.0747529,0.229003,0.650179,0.223844,0.50215,0.294698,0.00907354,0.138202,0.289204,0.327108,0.319027,0.278044,0.490301,0.428671,0.228096,0.336314,0.19763,0.15631,0.567452,0.421464,0.0293525,0.0181002,0.516462,0.135248,0.335105,0.144809,0.145539,0.385517,0.0123475,0.0224279,0.459928,0.252232,0.152681,0.0465712,0.137098,0.259235,0.134788,0.0985856,0.18767,0.293698,0.284593,0.343734,0.306556,0.305777,0.000385108,0.503082,0.522888,0.284629,0.262537,0.359455,0.226257,0.405955,0.0175765,0.363685,0.130283,0.166672,0.206222,0.03988,0.651524,0.113671,0.040018,0.339277,0.552319,0.281425,0.141758,0.455379,0.0385377,0.159617,0.238587,0.372281,0.232251,0.189515,0.0891382,0.0595618,0.524997,0.625309,0.000983703,0.539392,0.00966846,0.0277379,0.404569,9.61912e-05,0.0186811,0.316179,0.0697683,0.0556835,0.192544,0.0779981,0.0575676,0.144322,0.223391,0.203656,0.442884,0.441735,0.191777,0.111931,0.28934,0.0435386,0.303336,0.126478,0.134852,0.10689,0.273326,0.0627924,0.0842821,0.0179103,0.303939,0.0434097,0.390395,0.0464827,0.169603,0.114583,0.104559,0.0899537,0.0866966,0.15983,0.107111,0.0438639,0.00389058,0.123593,0.129156,0.210369,0.193675,0.346372,0.0499762,0.0828956,0.0666953,0.182185,0.111277,0.219383,0.332809,0.19559,0.132201,0.188694,0.0481795,0.199971,0.406014,0.127758,0.175785,0.0012141,0.169234,0.0876426,0.0952322,0.0112557,0.222432,0.00594521,0.275244,0.00481323,0.173708,0.141119,0.211595,0.0300692,0.131551,0.0445237,0.052362,0.208866,0.153187,0.0797897,0.0974211,0.160149,0.123526,0.0906475,0.0558058,0.28262,0.517717,0.137332,0.0145999,0.0656973,0.211746,0.026334,0.0801488,0.0757897,0.161801,0.0199999,0.0549034,0.0779715,0.0561838,0.0417636,0.0345419,0.0388736,0.254674,0.170307,0.201033,0.0488949,0.174921,0.370421,0.0330727,0.0694567,0.219556,0.0394698,0.0596469,0.419264,0.122476,0.108872,0.11002,0.26144,0.0286025,0.549354,0.144567,0.038848,0.0874516,0.0550279,0.144067,0.253693,0.217069,0.190048,0.131088,0.394069,0.237101,0.286988,0.0761239,0.172491,0.0818785,0.182701,0.335058,0.011488,0.141463,0.167267,0.140622,0.0889592,0.309588,0.000417587,0.0473033,0.094881,0.00315933,0.132886,0.0774373,0.109194,0.128564,0.131452,0.112518,0.448776,0.051838,0.0993999,0.0500365,0.061829,0.0755121,0.0936516,0.144075,0.0340203,0.0741807,0.277091,0.389379,0.655293,0.21727,0.289306,0.119215,0.192475,0.177967,0.547859,0.057571,0.047591,0.392974,0.0608699,0.175319,0.300597,0.0713214,0.0271723,0.291114,0.0355833,0.125606,0.175094,0.696435,0.519327,0.206454,0.218192,0.108277,0.0673484,0.108748,0.0494066,0.0958493,0.205732,0.0755808,0.045654,0.110216,0.070276,0.226171,0.153469,0.0376916,0.13262,0.0450031,0.0539144,0.114242,0.0929549,0.172425,0.104948,0.221645,0.057168,0.234298,0.0759837,0.286863,0.152372,0.194941,0.218271,0.101607,0.327067,0.172982,0.340936,0.151597,0.0626744,0.191335,0.148574,0.504592,0.155821,0.0718905,0.0919008,0.0602373,0.144304,0.15063,0.0973823,0.15503,0.170295,0.193653,0.137219,0.228144,0.251466,0.288096,0.00738316,0.0838874,0.331451,0.113145,0.112651,0.186638,0.174776,0.0948451,0.264079,0.249049,0.140533,0.0997756,0.257598,0.103667,0.113069,0.025556,0.16791,0.09066,0.585505,0.166967,0.188651,0.0813902,0.184948,0.156261,0.311847,0.0062542,0.0590944,0.247324,0.178389,0.0257622,0.231073,0.407281,0.619906,0.0360851,0.0998546,0.131093,0.0434602,0.133616,0.418146,0.0115948,0.120614,0.0162067,0.231447,0.0455669,0.115047,0.0789454,0.42622,0.448797,8.1913e-05,0.396996,0.36145,0.406019,0.00150864,0.000284936,0.00417723,0.432035,0.366326,0.390366,0.48809,0.0334527,0.00308025,0.0391928,0.158867,0.0572701,0.227104,0.166658,0.250246,0.38649,0.00488219,0.000799065,0.192225,0.729153,0.00513616,0.164197,0.000461108,0.00506733,0.0113427,0.138768,0.0642229,0.468444,0.258219,0.446557,0.243383,0.777351,0.0889613,0.73485,0.029557,0.161598,0.164332,0.00422412,0.496032,0.21803,0.37357,0.78509,0.477353,0.0201095,0.399222,0.0175763,0.20342,0.200493,0.20558,0.00583368,0.25656,0.425963,0.00100853,0.383291,0.156104,0.141318,0.0168417,0.0961477,0.314438,0.354789,0.163828,0.230581,0.120226,0.0448825,0.000219142,0.314429,0.181415,0.0442318,0.78,0.616388,0.408413,0.165147,0.322213,0.28903,0.33942,0.0156581,0.387276,0.522605,0.481611,0.180745,0.222037,0.416621,0.416292,0.462712,0.734551,0.0118519,0.0225745,0.122646,0.138871,0.00583733,0.166905,0.19783,0.0833851,0.316453,0.140384,0.175199,0.332919,0.373557,0.0393909,0.408861,0.365487,0.178743,0.39088,0.0758087,0.236011,0.203486,0.273398,0.0816179,0.119167,0.351067,0.275347,0.637444,0.305885,0.241132,0.371414,0.30666,0.0516603,0.0323359,0.386538,0.00602464,0.250964,0.383276,0.457886,0.156714,0.220231,0.509064,0.196976,0.019637,0.463751,0.601877,0.307334,0.459728,0.283463,0.563586,0.472935,0.0151656,0.0413011,0.368095,0.275089,0.0858306,0.138622,0.000100654,0.339729,0.197805,0.24107,0.0870376,0.332774,0.173874,0.299887,0.0814305,0.205413,0.0165618,0.0779009,0.276869,0.205298,0.0337138,0.18966,0.036838,0.188263,0.0719199,0.264884,0.162568,0.19104,0.163057,0.219428,0.208013,0.0900729,0.0953646,0.0146333,0.252184,0.000136473,0.255516,0.20753,0.447185,0.179412,0.193601,0.220904,0.222977,0.0664606,0.00651011,0.21801,0.198614,0.186804,0.123324,0.199468,0.0325925,0.0933115,0.12405,0.179889,0.0279371,0.27872,0.0855609,0.131118,0.20837,0.0335483,0.222339,0.0673329,0.20847,0.266544,0.113092,0.145701,0.229428,0.162145,0.228955,0.168748,0.0384949,0.0660995,0.0521984,0.0455518,0.268741,0.201602,0.350452,0.154941,0.120196,0.0986735,0.108462,0.0595618,0.21593,0.158479,0.220319,0.195218,0.00805527,0.259632,0.0532009,0.180606,0.159884,0.257294,0.150733,0.217112,0.123917,0.184317,0.185335,0.0723291,0.0367308,0.0377094,0.203781,0.21382,0.207559,0.141867,0.193031,0.249101,0.115972,0.224568,0.0331281,0.173026,0.200432,0.139785,0.197112,0.240478,0.156465,0.13108,0.256963,0.222798,0.172134,0.176789,0.0969345,0.202137,0.310405,0.280943,0.218161,0.0822373,0.202065,0.106739,0.0536053,0.0537737,0.15113,0.078016,0.0407233,0.0537355,0.319922,0.261724,0.211332,0.187731,0.233626,0.189559,0.0812887,0.0981146,0.064145,0.121913,0.0638699,0.104603,0.0663259,0.0762523,0.128736,0.109171,0.04411,0.066952,0.089609,0.0367455,0.13497,0.0224775,0.0488311,0.286691,0.347036,0.141729,0.263159,0.255956,0.200105,0.227491,0.29837,0.253509,0.177664,0.28365,0.264413,0.131761,0.160658,0.206239,0.19924,0.28689,0.236464,0.0597546,0.115817,0.218052,0.223831,0.11528,0.194982,0.190993,0.281727,0.00480369,1.2918e-05,0.164638,0.224257,0.0935776,0.327622,0.225752,0.207791,0.0958756,0.0859274,0.316866,0.171683,0.158847,0.00417402,0.071111,0.270604,0.101021,0.222548,0.175934,0.157274,0.215705,0.035048,0.205954,0.0750181
|tfbs_overrepresentation=0.147255,0.0586687,0.134243,0.0477154,0.199763,0.287811,0.0430074,0.414564,0.03272,0.0257057,0.139423,0.225367,0.188771,0.125978,0.148679,0.0619003,0.140982,0.0982016,0.0528514,0.108057,0.188635,0.132577,0.081977,0.0948982,0.0415721,0.215492,0.209392,0.0907212,0.143747,0.0933697,0.204953,0.114046,0.0180314,0.208242,0.0665252,0.0844722,0.688181,0.0429682,0.120351,0.0667043,0.0964797,0.0246116,0.140039,0.0180778,0.120917,0.0362416,0.0380166,0.18151,0.111283,0.121201,0.154071,0.0541794,0.0701653,0.0929951,0.198787,0.0384161,0.107455,0.212709,0.0783235,0.105572,0.0294301,0.149417,0.108602,0.0759481,0.054569,0.0504887,0.352278,0.0600088,0.0860723,0.167053,0.378921,0.067678,0.089036,0.119383,0.00747605,0.0171177,0.0964936,0.0436945,0.0372495,0.00725252,0.0956287,0.226912,0.0425,0.114846,0.291327,0.251834,0.064341,0.209032,0.608896,0.062747,0.0857568,0.0495878,0.0953825,0.0473737,0.0853887,0.115028,0.58489,0.153631,0.0927458,0.27413,0.0574857,0.0422457,0.141874,0.0370665,0.219088,0.0409286,0.0669887,0.338096,0.144217,0.269326,0.182599,0.0339971,0.149552,0.0176855,0.101221,0.0337525,0.0203386,0.0566549,0.139021,0.0838393,0.16671,0.214708,0.140123,0.0857827,0.102368,0.176912,0.0906875,0.0147934,0.0843604,0.134932,0.0595773,0.0748346,0.0572164,0.0227861,0.125792,0.108101,0.0648644,0.0553359,0.0330399,0.00395526,0.022776,0.127606,0.203923,0.155998,0.596561,0.0693171,0.0988228,0.0842275,0.0389418,0.120833,0.200647,0.143677,0.180712,0.0265818,0.0427088,0.117549,0.0747594,0.228385,0.0516985,0.0337251,0.227719,0.0952829,0.116642,0.147788,0.273479,0.114283,0.0400322,0.127369,0.0403542,0.312091,0.179689,0.137725,0.12972,0.0541353,0.0799324,0.090079,0.140334,0.181817,0.178449,0.0356339,0.158844,0.122474,0.0274061,0.115574,0.0737247,0.118847,0.183031,0.0401756,0.0828697,0.173562,0.107145,0.187297,0.122935,0.228812,0.112671,0.0470731,0.0782523,0.0602859,0.0676496,0.109673,0.0893019,0.060398,0.0308319,0.0606036,0.136451,0.259411,0.27358,0.15185,0.206299,0.178359,0.0458667,0.104357,0.121154,0.1129,0.312578,0.169057,0.164202,0.100942,0.062995,0.10299,0.0105855,0.37245,0.15606,0.161026,0.0738599,0.126611,0.138852,0.085973,0.060453,0.059896,0.0538541,0.384785,0.0418404,0.0765029,0.0959204,0.0931946,0.0472272,0.263087,0.163502,0.214803,0.182472,0.348993,0.0983991,0.0830921,0.116283,0.136838,0.0815104,0.111647,0.372804,0.117027,0.159052,0.185164,0.185743,0.0980288,0.0980899,0.159674,0.107242,0.201859,0.0695832,0.582402,0.0619218,0.1751,0.163376,0.128096,0.0345133,0.0810678,0.0811639,0.0920653,0.118078,0.0755168,0.278352,0.063292,0.254773,0.446759,0.0865903,0.0380459,0.130174,0.584917,0.0381789,3.18958e-05,0.635872,0.563047,0.517782,0.228731,0.335423,0.629514,0.261553,0.0222487,0.373681,0.00641099,0.49143,0.330703,0.395854,0.329568,0.042539,7.83499e-07,0.271958,0.292154,0.0159894,0.0921263,0.217139,0.597171,0.187251,0.362792,0.181715,0.423979,0.109988,0.330894,0.218329,0.427027,0.376924,0.463191,0.647576,0.173877,8.98016e-08,0.370782,0.415647,0.142924,0.253571,0.276829,0.301787,0.481778,0.316882,0.223503,0.503224,0.0669244,0.283727,0.314747,0.21363,0.291709,0.448095,0.576651,0.102333,0.292835,0.0280875,0.115044,0.373868,0.00194724,0.241757,0.18237,0.346458,0.513427,0.747852,0.275351,0.236471,0.185661,0.346319,0.0427964,0.270984,0.625945,0.000781971,0.513852,0.0389686,0.248634,0.281576,0.472384,0.163244,0.0670502,0.0730934,0.184794,0.230427,0.0582356,0.217247,0.412837,0.305671,0.546839,0.551561,0.448039,0.00208206,0.312808,0.695172,0.0451077,0.0747529,0.229003,0.650179,0.223844,0.50215,0.294698,0.00907354,0.138202,0.289204,0.327108,0.319027,0.278044,0.490301,0.428671,0.228096,0.336314,0.19763,0.15631,0.567452,0.421464,0.0293525,0.0181002,0.516462,0.135248,0.335105,0.144809,0.145539,0.385517,0.0123475,0.0224279,0.459928,0.252232,0.152681,0.0465712,0.137098,0.259235,0.134788,0.0985856,0.18767,0.293698,0.284593,0.343734,0.306556,0.305777,0.000385108,0.503082,0.522888,0.284629,0.262537,0.359455,0.226257,0.405955,0.0175765,0.363685,0.130283,0.166672,0.206222,0.03988,0.651524,0.113671,0.040018,0.339277,0.552319,0.281425,0.141758,0.455379,0.0385377,0.159617,0.238587,0.372281,0.232251,0.189515,0.0891382,0.0595618,0.524997,0.625309,0.000983703,0.539392,0.00966846,0.0277379,0.404569,9.61912e-05,0.0186811,0.316179,0.0697683,0.0556835,0.192544,0.0779981,0.0575676,0.144322,0.223391,0.203656,0.442884,0.441735,0.191777,0.111931,0.28934,0.0435386,0.303336,0.126478,0.134852,0.10689,0.273326,0.0627924,0.0842821,0.0179103,0.303939,0.0434097,0.390395,0.0464827,0.169603,0.114583,0.104559,0.0899537,0.0866966,0.15983,0.107111,0.0438639,0.00389058,0.123593,0.129156,0.210369,0.193675,0.346372,0.0499762,0.0828956,0.0666953,0.182185,0.111277,0.219383,0.332809,0.19559,0.132201,0.188694,0.0481795,0.199971,0.406014,0.127758,0.175785,0.0012141,0.169234,0.0876426,0.0952322,0.0112557,0.222432,0.00594521,0.275244,0.00481323,0.173708,0.141119,0.211595,0.0300692,0.131551,0.0445237,0.052362,0.208866,0.153187,0.0797897,0.0974211,0.160149,0.123526,0.0906475,0.0558058,0.28262,0.517717,0.137332,0.0145999,0.0656973,0.211746,0.026334,0.0801488,0.0757897,0.161801,0.0199999,0.0549034,0.0779715,0.0561838,0.0417636,0.0345419,0.0388736,0.254674,0.170307,0.201033,0.0488949,0.174921,0.370421,0.0330727,0.0694567,0.219556,0.0394698,0.0596469,0.419264,0.122476,0.108872,0.11002,0.26144,0.0286025,0.549354,0.144567,0.038848,0.0874516,0.0550279,0.144067,0.253693,0.217069,0.190048,0.131088,0.394069,0.237101,0.286988,0.0761239,0.172491,0.0818785,0.182701,0.335058,0.011488,0.141463,0.167267,0.140622,0.0889592,0.309588,0.000417587,0.0473033,0.094881,0.00315933,0.132886,0.0774373,0.109194,0.128564,0.131452,0.112518,0.448776,0.051838,0.0993999,0.0500365,0.061829,0.0755121,0.0936516,0.144075,0.0340203,0.0741807,0.277091,0.389379,0.655293,0.21727,0.289306,0.119215,0.192475,0.177967,0.547859,0.057571,0.047591,0.392974,0.0608699,0.175319,0.300597,0.0713214,0.0271723,0.291114,0.0355833,0.125606,0.175094,0.696435,0.519327,0.206454,0.218192,0.108277,0.0673484,0.108748,0.0494066,0.0958493,0.205732,0.0755808,0.045654,0.110216,0.070276,0.226171,0.153469,0.0376916,0.13262,0.0450031,0.0539144,0.114242,0.0929549,0.172425,0.104948,0.221645,0.057168,0.234298,0.0759837,0.286863,0.152372,0.194941,0.218271,0.101607,0.327067,0.172982,0.340936,0.151597,0.0626744,0.191335,0.148574,0.504592,0.155821,0.0718905,0.0919008,0.0602373,0.144304,0.15063,0.0973823,0.15503,0.170295,0.193653,0.137219,0.228144,0.251466,0.288096,0.00738316,0.0838874,0.331451,0.113145,0.112651,0.186638,0.174776,0.0948451,0.264079,0.249049,0.140533,0.0997756,0.257598,0.103667,0.113069,0.025556,0.16791,0.09066,0.585505,0.166967,0.188651,0.0813902,0.184948,0.156261,0.311847,0.0062542,0.0590944,0.247324,0.178389,0.0257622,0.231073,0.407281,0.619906,0.0360851,0.0998546,0.131093,0.0434602,0.133616,0.418146,0.0115948,0.120614,0.0162067,0.231447,0.0455669,0.115047,0.0789454,0.42622,0.448797,8.1913e-05,0.396996,0.36145,0.406019,0.00150864,0.000284936,0.00417723,0.432035,0.366326,0.390366,0.48809,0.0334527,0.00308025,0.0391928,0.158867,0.0572701,0.227104,0.166658,0.250246,0.38649,0.00488219,0.000799065,0.192225,0.729153,0.00513616,0.164197,0.000461108,0.00506733,0.0113427,0.138768,0.0642229,0.468444,0.258219,0.446557,0.243383,0.777351,0.0889613,0.73485,0.029557,0.161598,0.164332,0.00422412,0.496032,0.21803,0.37357,0.78509,0.477353,0.0201095,0.399222,0.0175763,0.20342,0.200493,0.20558,0.00583368,0.25656,0.425963,0.00100853,0.383291,0.156104,0.141318,0.0168417,0.0961477,0.314438,0.354789,0.163828,0.230581,0.120226,0.0448825,0.000219142,0.314429,0.181415,0.0442318,0.78,0.616388,0.408413,0.165147,0.322213,0.28903,0.33942,0.0156581,0.387276,0.522605,0.481611,0.180745,0.222037,0.416621,0.416292,0.462712,0.734551,0.0118519,0.0225745,0.122646,0.138871,0.00583733,0.166905,0.19783,0.0833851,0.316453,0.140384,0.175199,0.332919,0.373557,0.0393909,0.408861,0.365487,0.178743,0.39088,0.0758087,0.236011,0.203486,0.273398,0.0816179,0.119167,0.351067,0.275347,0.637444,0.305885,0.241132,0.371414,0.30666,0.0516603,0.0323359,0.386538,0.00602464,0.250964,0.383276,0.457886,0.156714,0.220231,0.509064,0.196976,0.019637,0.463751,0.601877,0.307334,0.459728,0.283463,0.563586,0.472935,0.0151656,0.0413011,0.368095,0.275089,0.0858306,0.138622,0.000100654,0.339729,0.197805,0.24107,0.0870376,0.332774,0.173874,0.299887,0.0814305,0.205413,0.0165618,0.0779009,0.276869,0.205298,0.0337138,0.18966,0.036838,0.188263,0.0719199,0.264884,0.162568,0.19104,0.163057,0.219428,0.208013,0.0900729,0.0953646,0.0146333,0.252184,0.000136473,0.255516,0.20753,0.447185,0.179412,0.193601,0.220904,0.222977,0.0664606,0.00651011,0.21801,0.198614,0.186804,0.123324,0.199468,0.0325925,0.0933115,0.12405,0.179889,0.0279371,0.27872,0.0855609,0.131118,0.20837,0.0335483,0.222339,0.0673329,0.20847,0.266544,0.113092,0.145701,0.229428,0.162145,0.228955,0.168748,0.0384949,0.0660995,0.0521984,0.0455518,0.268741,0.201602,0.350452,0.154941,0.120196,0.0986735,0.108462,0.0595618,0.21593,0.158479,0.220319,0.195218,0.00805527,0.259632,0.0532009,0.180606,0.159884,0.257294,0.150733,0.217112,0.123917,0.184317,0.185335,0.0723291,0.0367308,0.0377094,0.203781,0.21382,0.207559,0.141867,0.193031,0.249101,0.115972,0.224568,0.0331281,0.173026,0.200432,0.139785,0.197112,0.240478,0.156465,0.13108,0.256963,0.222798,0.172134,0.176789,0.0969345,0.202137,0.310405,0.280943,0.218161,0.0822373,0.202065,0.106739,0.0536053,0.0537737,0.15113,0.078016,0.0407233,0.0537355,0.319922,0.261724,0.211332,0.187731,0.233626,0.189559,0.0812887,0.0981146,0.064145,0.121913,0.0638699,0.104603,0.0663259,0.0762523,0.128736,0.109171,0.04411,0.066952,0.089609,0.0367455,0.13497,0.0224775,0.0488311,0.286691,0.347036,0.141729,0.263159,0.255956,0.200105,0.227491,0.29837,0.253509,0.177664,0.28365,0.264413,0.131761,0.160658,0.206239,0.19924,0.28689,0.236464,0.0597546,0.115817,0.218052,0.223831,0.11528,0.194982,0.190993,0.281727,0.00480369,1.2918e-05,0.164638,0.224257,0.0935776,0.327622,0.225752,0.207791,0.0958756,0.0859274,0.316866,0.171683,0.158847,0.00417402,0.071111,0.270604,0.101021,0.222548,0.175934,0.157274,0.215705,0.035048,0.205954,0.0750181
}}
}}

Revision as of 14:47, 19 October 2012


Full id: C3086_Mesenchymal_Chondrocyte_Olfactory_Multipotent_aorta_colon_penis



Phase1 CAGE Peaks

Hg19::chr11:117075376..117075390,+p3@uc001pqq.1
Hg19::chr11:117075397..117075445,+p2@uc001pqq.1
Hg19::chr9:35682029..35682060,-p@chr9:35682029..35682060
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data


No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data


No GOStat results

Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>


Uber Anatomy
Ontology termp-valuen
muscle tissue2.29e-0964
musculature2.29e-0964
musculature of body2.29e-0964
mesenchyme5.73e-09160
entire embryonic mesenchyme5.73e-09160
vasculature8.92e-0978
vascular system8.92e-0978
skeletal muscle tissue1.51e-0862
striated muscle tissue1.51e-0862
myotome1.51e-0862
circulatory system1.13e-07112
artery1.37e-0742
arterial blood vessel1.37e-0742
arterial system1.37e-0742
cardiovascular system2.27e-07109
trunk mesenchyme3.35e-07122
dense mesenchyme tissue5.02e-0773
omentum5.82e-076
peritoneum5.82e-076
abdominal cavity5.82e-076
visceral peritoneum5.82e-076
trunk7.49e-07199
multi-cellular organism7.84e-07656
somite9.02e-0771
presomitic mesoderm9.02e-0771
presumptive segmental plate9.02e-0771
dermomyotome9.02e-0771
trunk paraxial mesoderm9.02e-0771
epithelial tube9.08e-07117


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data


Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data


No analysis results for this cluster

Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data


This analysis result is provided for C0 - C305 clusters.