FFCP PHASE1:Mm9::chr16:34120215..34120264,+: Difference between revisions
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|id=chr16:34120215..34120264,+ | |id=chr16:34120215..34120264,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.17e-27!9;CL:0002251!2.17e-27!9;CL:0000239!1.18e-19!6;CL:0000677!1.18e-19!6;CL:0000212!1.18e-19!6;CL:0000584!1.18e-19!6;CL:0000075!9.30e-17!7;CL:0000066!3.47e-16!25;CL:0002076!8.04e-16!15;CL:0000223!1.77e-11!20;CL:0000473!2.32e-10!3;CL:0000627!2.32e-10!3;CL:0000682!2.32e-10!3;CL:0002250!2.51e-09!3 | |ontology_enrichment_celltype=CL:0002563!2.17e-27!9;CL:0002251!2.17e-27!9;CL:0000239!1.18e-19!6;CL:0000677!1.18e-19!6;CL:0000212!1.18e-19!6;CL:0000584!1.18e-19!6;CL:0000075!9.30e-17!7;CL:0000066!3.47e-16!25;CL:0002076!8.04e-16!15;CL:0000223!1.77e-11!20;CL:0000473!2.32e-10!3;CL:0000627!2.32e-10!3;CL:0000682!2.32e-10!3;CL:0002250!2.51e-09!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.22e-30,9;CL:0002251,4.22e-30,9;CL:0000239,1.50e-21,6;CL:0000677,1.50e-21,6;CL:0000584,1.50e-21,6;CL:0000075,2.16e-18,7;CL:0000066,5.01e-18,25;CL:0002076,1.71e-17,15;CL:0000223,9.32e-13,20;CL:0000682,2.78e-11,3;CL:0002250,3.87e-10,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.77e-44!15;UBERON:0001242!2.25e-38!13;UBERON:0000060!2.25e-38!13;UBERON:0001262!2.25e-38!13;UBERON:0004786!2.25e-38!13;UBERON:0003350!2.17e-27!9;UBERON:0004808!2.17e-27!9;UBERON:0001277!2.17e-27!9;UBERON:0004923!1.91e-26!24;UBERON:0000160!8.72e-26!43;UBERON:0000485!3.91e-22!11;UBERON:0005409!1.34e-19!59;UBERON:0000331!2.19e-09!3;UBERON:0002116!2.19e-09!3;UBERON:0001204!2.19e-09!3;UBERON:0001168!2.19e-09!3;UBERON:0001007!1.31e-08!128;UBERON:0001555!1.31e-08!128;UBERON:0007026!1.31e-08!128;UBERON:0004119!2.09e-08!130;UBERON:0000925!2.09e-08!130;UBERON:0006595!2.09e-08!130;UBERON:0001962!3.46e-07!2;UBERON:0001961!3.46e-07!2;UBERON:0001744!3.46e-07!2;UBERON:0004921!6.88e-07!126;UBERON:0004185!6.88e-07!126 | |ontology_enrichment_uberon=UBERON:0000344!3.77e-44!15;UBERON:0001242!2.25e-38!13;UBERON:0000060!2.25e-38!13;UBERON:0001262!2.25e-38!13;UBERON:0004786!2.25e-38!13;UBERON:0003350!2.17e-27!9;UBERON:0004808!2.17e-27!9;UBERON:0001277!2.17e-27!9;UBERON:0004923!1.91e-26!24;UBERON:0000160!8.72e-26!43;UBERON:0000485!3.91e-22!11;UBERON:0005409!1.34e-19!59;UBERON:0000331!2.19e-09!3;UBERON:0002116!2.19e-09!3;UBERON:0001204!2.19e-09!3;UBERON:0001168!2.19e-09!3;UBERON:0001007!1.31e-08!128;UBERON:0001555!1.31e-08!128;UBERON:0007026!1.31e-08!128;UBERON:0004119!2.09e-08!130;UBERON:0000925!2.09e-08!130;UBERON:0006595!2.09e-08!130;UBERON:0001962!3.46e-07!2;UBERON:0001961!3.46e-07!2;UBERON:0001744!3.46e-07!2;UBERON:0004921!6.88e-07!126;UBERON:0004185!6.88e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.23e-48,15;UBERON:0001242,3.00e-42,13;UBERON:0001262,3.00e-42,13;UBERON:0004786,3.00e-42,13;UBERON:0000160,1.74e-41,31;UBERON:0003350,4.22e-30,9;UBERON:0004808,4.22e-30,9;UBERON:0001277,4.22e-30,9;UBERON:0004923,2.43e-29,24;UBERON:0005409,4.16e-26,47;UBERON:0000485,2.25e-24,11;UBERON:0002108,3.73e-13,4;UBERON:0001007,1.33e-10,116;UBERON:0001555,1.33e-10,116;UBERON:0007026,1.33e-10,116;UBERON:0004119,2.37e-10,118;UBERON:0000925,2.37e-10,118;UBERON:0006595,2.37e-10,118;UBERON:0000331,3.33e-10,3;UBERON:0002116,3.33e-10,3;UBERON:0001204,3.33e-10,3;UBERON:0001168,3.33e-10,3;UBERON:0004921,1.62e-08,114;UBERON:0001962,8.88e-08,2;UBERON:0001961,8.88e-08,2;UBERON:0001744,8.88e-08,2 | |||
|phase1_expression=0,23.0323769041978,20.9299650119187,34.1784558776718,34.561805366298,8.39396359559449,5.84031601488814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5194544411253,11.6998733344257,13.7815671387605,20.6765758156356,14.2211013572687,4.3705386474966,9.8291750606373,2.43903561720835,0,0,0,4.33277429626912,5.31950865147176,5.10423390655923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,4.33898742932428,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,15.5828803677241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.8338706300765,21.6849464664106,0,0,0,0,0,0,19.455691523325,0,0,0,0,22.4704852163555,15.9942156907274,16.7278669533668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.99554007911642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,23.0323769041978,20.9299650119187,34.1784558776718,34.561805366298,8.39396359559449,5.84031601488814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5194544411253,11.6998733344257,13.7815671387605,20.6765758156356,14.2211013572687,4.3705386474966,9.8291750606373,2.43903561720835,0,0,0,4.33277429626912,5.31950865147176,5.10423390655923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,4.33898742932428,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,15.5828803677241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.8338706300765,21.6849464664106,0,0,0,0,0,0,19.455691523325,0,0,0,0,22.4704852163555,15.9942156907274,16.7278669533668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.99554007911642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:34120215..34120264,+ | |short_description=p@chr16:34120215..34120264,+ | ||
}} | }} |
Revision as of 09:45, 14 November 2012
Short description: | p@chr16:34120215..34120264, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:34120215..34120264, + |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.22e-30 | 9 |
epithelial cell of alimentary canal | 4.22e-30 | 9 |
brush border epithelial cell | 1.50e-21 | 6 |
gut absorptive cell | 1.50e-21 | 6 |
enterocyte | 1.50e-21 | 6 |
columnar/cuboidal epithelial cell | 2.16e-18 | 7 |
epithelial cell | 5.01e-18 | 25 |
endo-epithelial cell | 1.71e-17 | 15 |
endodermal cell | 9.32e-13 | 20 |
M cell of gut | 2.78e-11 | 3 |
intestinal crypt stem cell | 3.87e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.23e-48 | 15 |
intestinal mucosa | 3.00e-42 | 13 |
wall of intestine | 3.00e-42 | 13 |
gastrointestinal system mucosa | 3.00e-42 | 13 |
intestine | 1.74e-41 | 31 |
epithelium of mucosa | 4.22e-30 | 9 |
gastrointestinal system epithelium | 4.22e-30 | 9 |
intestinal epithelium | 4.22e-30 | 9 |
organ component layer | 2.43e-29 | 24 |
gastrointestinal system | 4.16e-26 | 47 |
simple columnar epithelium | 2.25e-24 | 11 |
small intestine | 3.73e-13 | 4 |
digestive system | 1.33e-10 | 116 |
digestive tract | 1.33e-10 | 116 |
primitive gut | 1.33e-10 | 116 |
endoderm-derived structure | 2.37e-10 | 118 |
endoderm | 2.37e-10 | 118 |
presumptive endoderm | 2.37e-10 | 118 |
ileal mucosa | 3.33e-10 | 3 |
ileum | 3.33e-10 | 3 |
mucosa of small intestine | 3.33e-10 | 3 |
wall of small intestine | 3.33e-10 | 3 |
subdivision of digestive tract | 1.62e-08 | 114 |
gut-associated lymphoid tissue | 8.88e-08 | 2 |
mucosa-associated lymphoid tissue | 8.88e-08 | 2 |
lymphoid tissue | 8.88e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.