FFCP PHASE1:Mm9::chr11:100002838..100002881,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr11:100002838..100002881,+ | |id=chr11:100002838..100002881,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.91e-11,3;CL:0002202,2.91e-11,3;CL:0000069,2.91e-11,3;CL:0002632,2.91e-11,3;CL:0002368,2.91e-11,3;CL:0000307,2.91e-11,3;CL:0000377,2.91e-11,3;CL:0002076,3.21e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.20e-21!59;UBERON:0000160!5.25e-17!43;UBERON:0004119!8.09e-13!130;UBERON:0000925!8.09e-13!130;UBERON:0006595!8.09e-13!130;UBERON:0001007!6.92e-12!128;UBERON:0001555!6.92e-12!128;UBERON:0007026!6.92e-12!128;UBERON:0004921!1.17e-10!126;UBERON:0004185!1.17e-10!126;UBERON:0000344!8.53e-10!15;UBERON:0001242!6.45e-08!13;UBERON:0000060!6.45e-08!13;UBERON:0001262!6.45e-08!13;UBERON:0004786!6.45e-08!13;UBERON:0004923!4.02e-07!24 | |ontology_enrichment_uberon=UBERON:0005409!1.20e-21!59;UBERON:0000160!5.25e-17!43;UBERON:0004119!8.09e-13!130;UBERON:0000925!8.09e-13!130;UBERON:0006595!8.09e-13!130;UBERON:0001007!6.92e-12!128;UBERON:0001555!6.92e-12!128;UBERON:0007026!6.92e-12!128;UBERON:0004921!1.17e-10!126;UBERON:0004185!1.17e-10!126;UBERON:0000344!8.53e-10!15;UBERON:0001242!6.45e-08!13;UBERON:0000060!6.45e-08!13;UBERON:0001262!6.45e-08!13;UBERON:0004786!6.45e-08!13;UBERON:0004923!4.02e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.14e-22,47;UBERON:0000160,1.16e-16,31;UBERON:0001007,1.03e-13,116;UBERON:0001555,1.03e-13,116;UBERON:0007026,1.03e-13,116;UBERON:0004119,2.13e-13,118;UBERON:0000925,2.13e-13,118;UBERON:0006595,2.13e-13,118;UBERON:0002108,8.20e-13,4;UBERON:0000344,2.77e-12,15;UBERON:0004921,2.65e-11,114;UBERON:0003126,2.91e-11,3;UBERON:0001005,2.91e-11,3;UBERON:0007196,2.91e-11,3;UBERON:0001558,2.91e-11,3;UBERON:0000331,3.56e-10,3;UBERON:0002116,3.56e-10,3;UBERON:0001204,3.56e-10,3;UBERON:0001168,3.56e-10,3;UBERON:0001242,5.62e-08,13;UBERON:0001262,5.62e-08,13;UBERON:0004786,5.62e-08,13;UBERON:0001962,9.31e-08,2;UBERON:0001961,9.31e-08,2;UBERON:0001744,9.31e-08,2;UBERON:0004923,3.22e-07,24;UBERON:0001155,3.22e-07,2;UBERON:0000059,3.22e-07,2;UBERON:0010147,6.53e-07,2;UBERON:0003937,6.53e-07,2;UBERON:0005399,6.53e-07,2 | |||
|phase1_expression=0,0.697950815278722,1.81999695755814,0,1.00179145989269,0.671517087647559,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.55987876469451,4.5881856213434,0.57423196411502,1.7230479846363,0.861884930743556,6.84084310042946,2.01624103807945,1.55211357458713,0,0,0,0.577703239502549,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,24.8964697162896,23.3091076237091,28.8148933658426,0.11418387971906,0,0,0,0.304465478312141,0,0,0,0,0,0.144599356919912,0,0,0,0,1.86391761218122,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0,0,0.164167464079095,0,0,0,0.134206418760372,0,0,0.330418782983798,1.32225283331772,0.213288250535234,0.464473343720877,0.257734922644187,0,0.22237804384487,0.570676878337677,1.89811624617805,0.823494773620054,1.50801125280162,0.397912944082302,0.974820435595601,0.898819408654221,2.37751854862164,2.38969527905241,0,0.114248512609729,0,0,0,0.210407459670956,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0,0,0.238043640886014,0.975668239288994,0,0.221464689648775,0.478364305972461,0.327726629431476,0.690739927463582,0.289298117163023,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06839362200353,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0.377210159511796,0.590603785761546,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.23467170806371,0.63549621259146,1.32317038832977,0,0,0,0,0.164140899745061,1.7488850197791,0,0,0.206386867963223,0,0,0,0,0,0,0,2.86401185404534,0.158167996790568,0.203319467126849,1.08005340821801,1.46361807210128,2.18362563746178,0.539457385539283,0.743881101528023,2.35580347785627,3.36998930558661,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887943813496259,0.448569283047378,0.335769232728157,0.386379188064381,0,0.183151624267265,0,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0,0.499621155875892,0,0,0,0,0 | |phase1_expression=0,0.697950815278722,1.81999695755814,0,1.00179145989269,0.671517087647559,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.55987876469451,4.5881856213434,0.57423196411502,1.7230479846363,0.861884930743556,6.84084310042946,2.01624103807945,1.55211357458713,0,0,0,0.577703239502549,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,24.8964697162896,23.3091076237091,28.8148933658426,0.11418387971906,0,0,0,0.304465478312141,0,0,0,0,0,0.144599356919912,0,0,0,0,1.86391761218122,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0,0,0.164167464079095,0,0,0,0.134206418760372,0,0,0.330418782983798,1.32225283331772,0.213288250535234,0.464473343720877,0.257734922644187,0,0.22237804384487,0.570676878337677,1.89811624617805,0.823494773620054,1.50801125280162,0.397912944082302,0.974820435595601,0.898819408654221,2.37751854862164,2.38969527905241,0,0.114248512609729,0,0,0,0.210407459670956,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0.169745085775188,0,0,0.238043640886014,0.975668239288994,0,0.221464689648775,0.478364305972461,0.327726629431476,0.690739927463582,0.289298117163023,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06839362200353,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0.377210159511796,0.590603785761546,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.23467170806371,0.63549621259146,1.32317038832977,0,0,0,0,0.164140899745061,1.7488850197791,0,0,0.206386867963223,0,0,0,0,0,0,0,2.86401185404534,0.158167996790568,0.203319467126849,1.08005340821801,1.46361807210128,2.18362563746178,0.539457385539283,0.743881101528023,2.35580347785627,3.36998930558661,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887943813496259,0.448569283047378,0.335769232728157,0.386379188064381,0,0.183151624267265,0,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0,0.499621155875892,0,0,0,0,0 | ||
|short_description=p@chr11:100002838..100002881,+ | |short_description=p@chr11:100002838..100002881,+ | ||
}} | }} |
Revision as of 00:05, 14 November 2012
Short description: | p@chr11:100002838..100002881, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:100002838..100002881, + |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.91e-11 | 3 |
epithelial cell of tracheobronchial tree | 2.91e-11 | 3 |
branched duct epithelial cell | 2.91e-11 | 3 |
epithelial cell of lower respiratory tract | 2.91e-11 | 3 |
respiratory epithelial cell | 2.91e-11 | 3 |
tracheal epithelial cell | 2.91e-11 | 3 |
tracheoblast | 2.91e-11 | 3 |
endo-epithelial cell | 3.21e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.14e-22 | 47 |
intestine | 1.16e-16 | 31 |
digestive system | 1.03e-13 | 116 |
digestive tract | 1.03e-13 | 116 |
primitive gut | 1.03e-13 | 116 |
endoderm-derived structure | 2.13e-13 | 118 |
endoderm | 2.13e-13 | 118 |
presumptive endoderm | 2.13e-13 | 118 |
small intestine | 8.20e-13 | 4 |
mucosa | 2.77e-12 | 15 |
subdivision of digestive tract | 2.65e-11 | 114 |
trachea | 2.91e-11 | 3 |
respiratory airway | 2.91e-11 | 3 |
tracheobronchial tree | 2.91e-11 | 3 |
lower respiratory tract | 2.91e-11 | 3 |
ileal mucosa | 3.56e-10 | 3 |
ileum | 3.56e-10 | 3 |
mucosa of small intestine | 3.56e-10 | 3 |
wall of small intestine | 3.56e-10 | 3 |
intestinal mucosa | 5.62e-08 | 13 |
wall of intestine | 5.62e-08 | 13 |
gastrointestinal system mucosa | 5.62e-08 | 13 |
gut-associated lymphoid tissue | 9.31e-08 | 2 |
mucosa-associated lymphoid tissue | 9.31e-08 | 2 |
lymphoid tissue | 9.31e-08 | 2 |
organ component layer | 3.22e-07 | 24 |
colon | 3.22e-07 | 2 |
large intestine | 3.22e-07 | 2 |
male accessory sex gland | 6.53e-07 | 2 |
sex gland | 6.53e-07 | 2 |
male reproductive gland | 6.53e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.