FFCP PHASE1:Mm9::chr3:95898220..95898255,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr3:95898220..95898255,- | |id=chr3:95898220..95898255,- | ||
|ontology_enrichment_celltype=CL:0000066!9.87e-22!25;CL:0000223!2.76e-19!20;CL:0002563!2.77e-17!9;CL:0002251!2.77e-17!9;CL:0002076!6.14e-17!15;CL:0000239!5.08e-12!6;CL:0000677!5.08e-12!6;CL:0000212!5.08e-12!6;CL:0000584!5.08e-12!6;CL:0000075!3.79e-10!7;CL:0002250!7.81e-07!3 | |ontology_enrichment_celltype=CL:0000066!9.87e-22!25;CL:0000223!2.76e-19!20;CL:0002563!2.77e-17!9;CL:0002251!2.77e-17!9;CL:0002076!6.14e-17!15;CL:0000239!5.08e-12!6;CL:0000677!5.08e-12!6;CL:0000212!5.08e-12!6;CL:0000584!5.08e-12!6;CL:0000075!3.79e-10!7;CL:0002250!7.81e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.03e-42,9;CL:0002251,5.03e-42,9;CL:0000066,9.33e-39,25;CL:0000223,5.46e-35,20;CL:0002076,2.03e-31,15;CL:0000239,3.14e-25,6;CL:0000677,3.14e-25,6;CL:0000584,3.14e-25,6;CL:0000075,1.24e-21,7;CL:0002250,1.36e-18,3;CL:0002321,4.65e-09,70;CL:0000682,1.33e-08,3;CL:0000213,1.20e-07,1;CL:0002078,1.20e-07,1;CL:0000115,1.20e-07,1;CL:0002262,1.20e-07,1;CL:1000398,1.20e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!2.77e-17!9;UBERON:0004808!2.77e-17!9;UBERON:0001277!2.77e-17!9;UBERON:0000485!1.00e-13!11;UBERON:0000160!1.22e-11!43;UBERON:0000344!2.49e-11!15;UBERON:0001242!2.88e-11!13;UBERON:0000060!2.88e-11!13;UBERON:0001262!2.88e-11!13;UBERON:0004786!2.88e-11!13;UBERON:0004923!6.68e-09!24;UBERON:0005409!7.27e-09!59;UBERON:0004119!3.17e-07!130;UBERON:0000925!3.17e-07!130;UBERON:0006595!3.17e-07!130;UBERON:0001007!8.94e-07!128;UBERON:0001555!8.94e-07!128;UBERON:0007026!8.94e-07!128 | |ontology_enrichment_uberon=UBERON:0003350!2.77e-17!9;UBERON:0004808!2.77e-17!9;UBERON:0001277!2.77e-17!9;UBERON:0000485!1.00e-13!11;UBERON:0000160!1.22e-11!43;UBERON:0000344!2.49e-11!15;UBERON:0001242!2.88e-11!13;UBERON:0000060!2.88e-11!13;UBERON:0001262!2.88e-11!13;UBERON:0004786!2.88e-11!13;UBERON:0004923!6.68e-09!24;UBERON:0005409!7.27e-09!59;UBERON:0004119!3.17e-07!130;UBERON:0000925!3.17e-07!130;UBERON:0006595!3.17e-07!130;UBERON:0001007!8.94e-07!128;UBERON:0001555!8.94e-07!128;UBERON:0007026!8.94e-07!128 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.03e-42,9;UBERON:0004808,5.03e-42,9;UBERON:0001277,5.03e-42,9;UBERON:0000485,2.85e-34,11;UBERON:0001242,6.72e-29,13;UBERON:0001262,6.72e-29,13;UBERON:0004786,6.72e-29,13;UBERON:0000344,5.92e-25,15;UBERON:0004923,2.57e-15,24;UBERON:0000160,1.22e-14,31;UBERON:0003929,8.65e-10,55;UBERON:0005409,2.65e-09,47;UBERON:0000490,6.04e-08,66;UBERON:0002394,1.20e-07,1;UBERON:0001281,1.20e-07,1;UBERON:0000353,1.20e-07,1;UBERON:0003497,1.20e-07,1;UBERON:0003909,1.20e-07,1;UBERON:0003928,1.20e-07,1;UBERON:0003835,1.20e-07,1;UBERON:0003513,1.20e-07,1;UBERON:0001280,1.20e-07,1;UBERON:0004647,1.20e-07,1;UBERON:0002294,1.20e-07,1;UBERON:0001173,1.20e-07,1;UBERON:0004912,1.20e-07,1;UBERON:0005171,1.20e-07,1;UBERON:0005911,1.52e-07,69 | |||
|phase1_expression=0,6.2815573375085,1.81999695755814,8.16653370528441,8.5152274090879,1.34303417529512,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,1.72269589234506,0.86152399231815,1.07735616342945,0,0,0,0,0,0,3.75507105676657,1.66234645358492,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9425468785923,0,0.679971333707751,0,1.29955283489534,0,0.140444420131752,0,0,0.35333957451034,0,0,0,0,0.649473123033642,1.52015919285059,0.505524445014783,0.34255163915718,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.204109497453984,0.2562274405697,0.562210347358373,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,1.05780226665418,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0.502670417600539,0.198956472041151,0.58489226135736,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0,0.486405680325106,0.274561413188081,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.179427713218951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,6.2815573375085,1.81999695755814,8.16653370528441,8.5152274090879,1.34303417529512,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,1.72269589234506,0.86152399231815,1.07735616342945,0,0,0,0,0,0,3.75507105676657,1.66234645358492,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9425468785923,0,0.679971333707751,0,1.29955283489534,0,0.140444420131752,0,0,0.35333957451034,0,0,0,0,0.649473123033642,1.52015919285059,0.505524445014783,0.34255163915718,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.204109497453984,0.2562274405697,0.562210347358373,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,1.05780226665418,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0.502670417600539,0.198956472041151,0.58489226135736,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0,0.486405680325106,0.274561413188081,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.179427713218951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:95898220..95898255,- | |short_description=p@chr3:95898220..95898255,- | ||
}} | }} |
Revision as of 22:10, 14 November 2012
Short description: | p@chr3:95898220..95898255, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:95898220..95898255, - |
Coexpression cluster: | MCL_coexpression_mm9:451 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.03e-42 | 9 |
epithelial cell of alimentary canal | 5.03e-42 | 9 |
epithelial cell | 9.33e-39 | 25 |
endodermal cell | 5.46e-35 | 20 |
endo-epithelial cell | 2.03e-31 | 15 |
brush border epithelial cell | 3.14e-25 | 6 |
gut absorptive cell | 3.14e-25 | 6 |
enterocyte | 3.14e-25 | 6 |
columnar/cuboidal epithelial cell | 1.24e-21 | 7 |
intestinal crypt stem cell | 1.36e-18 | 3 |
embryonic cell | 4.65e-09 | 70 |
M cell of gut | 1.33e-08 | 3 |
lining cell | 1.20e-07 | 1 |
meso-epithelial cell | 1.20e-07 | 1 |
endothelial cell | 1.20e-07 | 1 |
endothelial cell of sinusoid | 1.20e-07 | 1 |
endothelial cell of hepatic sinusoid | 1.20e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 5.03e-42 | 9 |
gastrointestinal system epithelium | 5.03e-42 | 9 |
intestinal epithelium | 5.03e-42 | 9 |
simple columnar epithelium | 2.85e-34 | 11 |
intestinal mucosa | 6.72e-29 | 13 |
wall of intestine | 6.72e-29 | 13 |
gastrointestinal system mucosa | 6.72e-29 | 13 |
mucosa | 5.92e-25 | 15 |
organ component layer | 2.57e-15 | 24 |
intestine | 1.22e-14 | 31 |
gut epithelium | 8.65e-10 | 55 |
gastrointestinal system | 2.65e-09 | 47 |
unilaminar epithelium | 6.04e-08 | 66 |
bile duct | 1.20e-07 | 1 |
hepatic sinusoid | 1.20e-07 | 1 |
parenchyma | 1.20e-07 | 1 |
abdomen blood vessel | 1.20e-07 | 1 |
sinusoid | 1.20e-07 | 1 |
digestive system duct | 1.20e-07 | 1 |
abdominal segment blood vessel | 1.20e-07 | 1 |
trunk blood vessel | 1.20e-07 | 1 |
liver parenchyma | 1.20e-07 | 1 |
liver lobule | 1.20e-07 | 1 |
biliary system | 1.20e-07 | 1 |
biliary tree | 1.20e-07 | 1 |
biliary bud | 1.20e-07 | 1 |
hepatic duct | 1.20e-07 | 1 |
endo-epithelium | 1.52e-07 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.