FFCP PHASE1:Mm9::chr13:52678878..52678927,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20963|HGNC=|MCL_coexpression_id=18|UniProt=|association_with_transcript=6bp_to_ENSMUST00000150672_5end|description=CAGE_peak_3_at_Syk_5end|id=chr13:52678878..52678927,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!1.07e-12!88;UBERON:0000926!1.17e-11!193;UBERON:0004120!1.17e-11!193;UBERON:0006603!1.17e-11!193;UBERON:0004872!1.52e-08!33;UBERON:0002193!1.81e-08!48;UBERON:0007100!4.74e-08!18;UBERON:0000948!4.74e-08!18;UBERON:0005498!4.74e-08!18;UBERON:0004140!4.74e-08!18;UBERON:0009881!4.74e-08!18;UBERON:0004141!4.74e-08!18;UBERON:0003084!4.74e-08!18;UBERON:0007005!4.74e-08!18;UBERON:0004139!4.74e-08!18;UBERON:0004291!4.74e-08!18;UBERON:0002405!5.29e-08!70;UBERON:0002390!3.27e-07!45;UBERON:0003061!3.27e-07!45;UBERON:0002204!3.33e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0003081,4.05e-16,87;UBERON:0002193,1.50e-13,48;UBERON:0002405,1.50e-13,48;UBERON:0000926,1.24e-12,120;UBERON:0004120,1.24e-12,120;UBERON:0006603,1.24e-12,120;UBERON:0002390,8.66e-12,45;UBERON:0003061,8.66e-12,45;UBERON:0007100,2.28e-09,18;UBERON:0000948,2.28e-09,18;UBERON:0005498,2.28e-09,18;UBERON:0004140,2.28e-09,18;UBERON:0009881,2.28e-09,18;UBERON:0004141,2.28e-09,18;UBERON:0003084,2.28e-09,18;UBERON:0007005,2.28e-09,18;UBERON:0004139,2.28e-09,18;UBERON:0004291,2.28e-09,18;UBERON:0004872,7.91e-09,33;UBERON:0001048,1.71e-08,134;UBERON:0001474,2.17e-08,22;UBERON:0004765,2.17e-08,22;UBERON:0001434,2.17e-08,22;UBERON:0002204,4.06e-08,32;UBERON:0002371,1.14e-07,16|phase1_expression=0.160148847104794,1.04692622291808,0.454999239389536,0,0,2.35030980676646,1.40167584357315,0,0,0,0,0,0,0,3.66420737997229,8.09901069559304,4.19737126876888,29.8111746263535,33.044578498983,31.4048342330542,0.17008658030214,6.85107563286109,8.35839325244593,5.43974237497583,3.44113921600755,1.14846392823004,0.430761996159075,0.646413698057667,0.950117097281869,0.252030129759931,2.43903561720835,0,0,0,0,0.997407872150954,0.204169356262369,6.27797446105362,6.2506827561904,5.75876118371178,7.05877785637217,9.56263678941824,6.79714494243615,0.629484089877886,0.304130793658544,0.550640256485045,0,0.218025156380447,0,0.388859798148567,1.53985063787899,0,19.6305649087552,0.725362142011344,0,2.57259436035947,6.5902691185914,0.515672092277442,0,0.528990979272033,0,0.677689064138264,0,2.2497492932035,2.96659908770092,2.1314403448383,0.299600110518405,0.384218305321555,0.311068836925433,0,0.841299845405528,0,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0,0.307213066512487,0,0.548925861614458,0,0,0.56276261003168,0.15279824777681,0.294628585473668,0.284743361598206,0.372798891650601,0.908714319998209,0.604572480854284,0.289864488701678,0.860423876981386,0,0,0.649776417447669,0,2.80888840263504,2.38602451609281,2.85764605063156,1.7666978725517,0,0,0,0,0.216491041011214,0.253359865475099,1.51657333504435,1.02765491747154,14.2415836005944,0.445326417194474,0.520455980298408,0.304465478312141,0.691846491768175,0.301445281105245,0.823120949949934,0.125666591329675,2.96633961281249,1.59059292611903,7.07688441559899,2.26473589926373,7.50861162765338,4.84875253135222,1.86391761218122,0,0,1.27728527604296,5.75112597628417,2.39961092397363,7.11593271609162,0,0,0,0.173824320192276,0,0.20778804455956,0.324482526135515,0.81471491080253,6.59356944233493,1.0108910337347,0.420883711772948,0.390361328888111,0.229902104433473,0.360124259610698,0.30140963567143,0.340182495756639,0.12811372028485,0.562210347358373,0.517406741478031,0.215567992932842,0.567318240503458,0.527853372491847,0,0.278047249225598,1.74126083261083,0.411564272815887,1.59227413454795,3.51106593656617,5.1469581422943,4.26245249093389,2.89976081549703,2.81431271977315,2.88099298337624,4.7348947117042,3.54175617145327,3.39387648352232,4.41814495025775,4.82892122519315,6.07179780309281,3.78487654801005,3.94001913789829,5.43161023957233,5.4093995347373,7.02560368931362,4.16039898157152,0.420579897128254,0.205809224758569,0.330418782983798,0.264450566663544,0.426576501070468,0.464473343720877,0.128867461322093,0.605050573870028,0,0.570676878337677,0.949058123089023,1.15289268306808,0.754005626400808,1.1937388322469,0.38992817423824,0,0.864552199498777,2.38969527905241,2.0863469104839,2.85621281524322,1.1270773567308,1.4255592949172,2.32742984601151,0.841629838683823,0.442655759869801,0.295220295959204,0.31399745568275,0.370191491765402,0.592905254174298,2.66952169145751,1.96558995113203,2.47348323623339,1.82574109249653,2.17059443777175,2.5462585178142,4.02774592431135,5.83686816390127,1.09824565275233,4.31304619582064,0.744281895337007,1.5601883655728,0.505157755894224,1.07638448113147,0,2.40179147216586,0.947457058852424,0.977789858652155,1.01847051465113,1.17345124144251,2.1775813467436,1.6663054862021,1.36593553500459,1.26108115284953,1.10732344824387,1.2756381492599,1.96635977658886,2.41758974612254,1.73578870297814,16.5870412333199,5.98296252200581,1.47529281905711,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| ||
|EntrezGene=20963 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt= | |||
|association_with_transcript=6bp_to_ENSMUST00000150672_5end | |||
|description=CAGE_peak_3_at_Syk_5end | |||
|id=chr13:52678878..52678927,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.07e-12!88;UBERON:0000926!1.17e-11!193;UBERON:0004120!1.17e-11!193;UBERON:0006603!1.17e-11!193;UBERON:0004872!1.52e-08!33;UBERON:0002193!1.81e-08!48;UBERON:0007100!4.74e-08!18;UBERON:0000948!4.74e-08!18;UBERON:0005498!4.74e-08!18;UBERON:0004140!4.74e-08!18;UBERON:0009881!4.74e-08!18;UBERON:0004141!4.74e-08!18;UBERON:0003084!4.74e-08!18;UBERON:0007005!4.74e-08!18;UBERON:0004139!4.74e-08!18;UBERON:0004291!4.74e-08!18;UBERON:0002405!5.29e-08!70;UBERON:0002390!3.27e-07!45;UBERON:0003061!3.27e-07!45;UBERON:0002204!3.33e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,4.05e-16,87;UBERON:0002193,1.50e-13,48;UBERON:0002405,1.50e-13,48;UBERON:0000926,1.24e-12,120;UBERON:0004120,1.24e-12,120;UBERON:0006603,1.24e-12,120;UBERON:0002390,8.66e-12,45;UBERON:0003061,8.66e-12,45;UBERON:0007100,2.28e-09,18;UBERON:0000948,2.28e-09,18;UBERON:0005498,2.28e-09,18;UBERON:0004140,2.28e-09,18;UBERON:0009881,2.28e-09,18;UBERON:0004141,2.28e-09,18;UBERON:0003084,2.28e-09,18;UBERON:0007005,2.28e-09,18;UBERON:0004139,2.28e-09,18;UBERON:0004291,2.28e-09,18;UBERON:0004872,7.91e-09,33;UBERON:0001048,1.71e-08,134;UBERON:0001474,2.17e-08,22;UBERON:0004765,2.17e-08,22;UBERON:0001434,2.17e-08,22;UBERON:0002204,4.06e-08,32;UBERON:0002371,1.14e-07,16 | |||
|phase1_expression=0.160148847104794,1.04692622291808,0.454999239389536,0,0,2.35030980676646,1.40167584357315,0,0,0,0,0,0,0,3.66420737997229,8.09901069559304,4.19737126876888,29.8111746263535,33.044578498983,31.4048342330542,0.17008658030214,6.85107563286109,8.35839325244593,5.43974237497583,3.44113921600755,1.14846392823004,0.430761996159075,0.646413698057667,0.950117097281869,0.252030129759931,2.43903561720835,0,0,0,0,0.997407872150954,0.204169356262369,6.27797446105362,6.2506827561904,5.75876118371178,7.05877785637217,9.56263678941824,6.79714494243615,0.629484089877886,0.304130793658544,0.550640256485045,0,0.218025156380447,0,0.388859798148567,1.53985063787899,0,19.6305649087552,0.725362142011344,0,2.57259436035947,6.5902691185914,0.515672092277442,0,0.528990979272033,0,0.677689064138264,0,2.2497492932035,2.96659908770092,2.1314403448383,0.299600110518405,0.384218305321555,0.311068836925433,0,0.841299845405528,0,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0,0.307213066512487,0,0.548925861614458,0,0,0.56276261003168,0.15279824777681,0.294628585473668,0.284743361598206,0.372798891650601,0.908714319998209,0.604572480854284,0.289864488701678,0.860423876981386,0,0,0.649776417447669,0,2.80888840263504,2.38602451609281,2.85764605063156,1.7666978725517,0,0,0,0,0.216491041011214,0.253359865475099,1.51657333504435,1.02765491747154,14.2415836005944,0.445326417194474,0.520455980298408,0.304465478312141,0.691846491768175,0.301445281105245,0.823120949949934,0.125666591329675,2.96633961281249,1.59059292611903,7.07688441559899,2.26473589926373,7.50861162765338,4.84875253135222,1.86391761218122,0,0,1.27728527604296,5.75112597628417,2.39961092397363,7.11593271609162,0,0,0,0.173824320192276,0,0.20778804455956,0.324482526135515,0.81471491080253,6.59356944233493,1.0108910337347,0.420883711772948,0.390361328888111,0.229902104433473,0.360124259610698,0.30140963567143,0.340182495756639,0.12811372028485,0.562210347358373,0.517406741478031,0.215567992932842,0.567318240503458,0.527853372491847,0,0.278047249225598,1.74126083261083,0.411564272815887,1.59227413454795,3.51106593656617,5.1469581422943,4.26245249093389,2.89976081549703,2.81431271977315,2.88099298337624,4.7348947117042,3.54175617145327,3.39387648352232,4.41814495025775,4.82892122519315,6.07179780309281,3.78487654801005,3.94001913789829,5.43161023957233,5.4093995347373,7.02560368931362,4.16039898157152,0.420579897128254,0.205809224758569,0.330418782983798,0.264450566663544,0.426576501070468,0.464473343720877,0.128867461322093,0.605050573870028,0,0.570676878337677,0.949058123089023,1.15289268306808,0.754005626400808,1.1937388322469,0.38992817423824,0,0.864552199498777,2.38969527905241,2.0863469104839,2.85621281524322,1.1270773567308,1.4255592949172,2.32742984601151,0.841629838683823,0.442655759869801,0.295220295959204,0.31399745568275,0.370191491765402,0.592905254174298,2.66952169145751,1.96558995113203,2.47348323623339,1.82574109249653,2.17059443777175,2.5462585178142,4.02774592431135,5.83686816390127,1.09824565275233,4.31304619582064,0.744281895337007,1.5601883655728,0.505157755894224,1.07638448113147,0,2.40179147216586,0.947457058852424,0.977789858652155,1.01847051465113,1.17345124144251,2.1775813467436,1.6663054862021,1.36593553500459,1.26108115284953,1.10732344824387,1.2756381492599,1.96635977658886,2.41758974612254,1.73578870297814,16.5870412333199,5.98296252200581,1.47529281905711,0.551873492609465,0.160550589987792,0,0,0.504941854408746,0.315508219416257,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0.963963949265421,1.27746076687442,0.35613120733451,0.488660878060728,0.989820737835213,0,0.242780636154981,0.302323556964751,0.377210159511796,0.590603785761546,0.922305443831782,0,0.363533729477506,1.42598951353889,0.316036757935816,0,0,0,0.720244376125241,0.388076051348264,0.643011105094777,0.354680467284547,0.178368817602071,0.329098041204242,0.304464949114599,0.23467170806371,0.63549621259146,0.220528398054962,2.63818004706368,1.13025098687134,1.02531972377865,0.596861720015682,0.492422699235184,1.7488850197791,0.370850604021019,8.03093139749908,2.47664241555867,4.8150577116125,5.46268525313604,8.20165366326151,5.94823250336959,2.54967644990783,4.61839792668071,4.28419918793714,0,0.474503990371703,1.62655573701479,0.756037385752609,0.418176592028937,0.87345025498471,0.404593039154462,0.743881101528023,0.26175594198403,1.29614973291793,1.86401793926078,0,4.18646328923141,1.82004339502807,1.36115831840833,2.32487682259916,2.02747350588934,1.87771581833206,1.0416350787516,0.943734099831398,0.483168241652012,0.576060012515731,4.74016680942267,2.22997736819181,3.3894615864393,2.7283372825337,2.8644271306797,3.57626438606277,5.04820887983869,3.2491695978407,3.83672509802961,4.19137436602499,3.83139503519994,4.77543615624787,3.84847366561318,5.37633750035217,1.13365191807606,0.443971906748129,0.0897138566094757,0.335769232728157,0.965947970160952,1.12609485270709,0.36630324853453,0.428736758158132,0.501572104035363,0,0,0,0.171853182343688,0,0,0.6750225002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| |||
|short_description=p3@Syk | |||
}} | |||
Revision as of 00:45, 13 September 2013
| Short description: | p3@Syk |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Syk_5end |
| Coexpression cluster: | MCL_coexpression_mm9:18 |
| Association with transcript: | 6bp_to_ENSMUST00000150672_5end |
| EntrezGene: | Syk |
| Link to Zenbu: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lateral plate mesoderm | 4.05e-16 | 87 |
| hemolymphoid system | 1.50e-13 | 48 |
| immune system | 1.50e-13 | 48 |
| mesoderm | 1.24e-12 | 120 |
| mesoderm-derived structure | 1.24e-12 | 120 |
| presumptive mesoderm | 1.24e-12 | 120 |
| hematopoietic system | 8.66e-12 | 45 |
| blood island | 8.66e-12 | 45 |
| primary circulatory organ | 2.28e-09 | 18 |
| heart | 2.28e-09 | 18 |
| primitive heart tube | 2.28e-09 | 18 |
| primary heart field | 2.28e-09 | 18 |
| anterior lateral plate mesoderm | 2.28e-09 | 18 |
| heart tube | 2.28e-09 | 18 |
| heart primordium | 2.28e-09 | 18 |
| cardiac mesoderm | 2.28e-09 | 18 |
| cardiogenic plate | 2.28e-09 | 18 |
| heart rudiment | 2.28e-09 | 18 |
| splanchnic layer of lateral plate mesoderm | 7.91e-09 | 33 |
| primordium | 1.71e-08 | 134 |
| bone element | 2.17e-08 | 22 |
| skeletal element | 2.17e-08 | 22 |
| skeletal system | 2.17e-08 | 22 |
| musculoskeletal system | 4.06e-08 | 32 |
| bone marrow | 1.14e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
