FFCP PHASE1:Mm9::chr2:79296458..79296461,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=403|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:79296458..79296461,-|id=chr2:79296458..79296461,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!6.07e-27!9;UBERON:0000019!6.07e-27!9;UBERON:0000047!6.07e-27!9;UBERON:0004088!6.07e-27!9;UBERON:0002104!6.07e-27!9;UBERON:0001456!6.07e-27!9;UBERON:0003072!6.07e-27!9;UBERON:0003071!6.07e-27!9;UBERON:0004128!6.07e-27!9;UBERON:0001444!6.19e-22!11;UBERON:0000020!4.70e-20!12;UBERON:0001032!4.70e-20!12;UBERON:0004456!4.70e-20!12;UBERON:0005085!1.84e-18!13;UBERON:0000033!3.65e-18!63;UBERON:0003056!2.64e-15!49;UBERON:0002346!8.23e-14!71;UBERON:0003075!8.23e-14!71;UBERON:0007284!8.23e-14!71;UBERON:0007811!1.06e-12!86;UBERON:0000153!2.02e-11!94;UBERON:0004121!2.44e-10!102;UBERON:0000924!2.44e-10!102;UBERON:0006601!2.44e-10!102;UBERON:0002616!5.16e-07!49;UBERON:0000955!7.54e-07!50;UBERON:0006238!7.54e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.74e-18,4;UBERON:0002680,1.74e-18,4;UBERON:0001895,1.74e-18,4;UBERON:0010092,1.74e-18,4;UBERON:0006215,1.74e-18,4;UBERON:0000970,3.94e-18,9;UBERON:0000019,3.94e-18,9;UBERON:0000047,3.94e-18,9;UBERON:0010312,3.94e-18,9;UBERON:0004088,3.94e-18,9;UBERON:0002104,3.94e-18,9;UBERON:0001456,3.94e-18,9;UBERON:0003072,3.94e-18,9;UBERON:0004128,3.94e-18,9;UBERON:0003071,3.94e-18,9;UBERON:0001444,5.33e-15,11;UBERON:0000020,8.01e-14,12;UBERON:0001032,8.01e-14,12;UBERON:0004456,8.01e-14,12;UBERON:0000033,7.96e-13,13;UBERON:0005085,7.96e-13,13;UBERON:0004733,1.08e-12,6;UBERON:0004732,1.08e-12,6;UBERON:0002028,1.08e-12,6;UBERON:0007277,1.08e-12,6;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64;UBERON:0003076,7.73e-07,12;UBERON:0003057,7.73e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191690942036473,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,1.46612694769419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.459804208866946,0.180062129805349,1.20563854268572,0.340182495756639,1.5373646434182,1.3118241438362,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:79296458..79296461,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=403 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:79296458..79296461,- | |||
|id=chr2:79296458..79296461,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!6.07e-27!9;UBERON:0000019!6.07e-27!9;UBERON:0000047!6.07e-27!9;UBERON:0004088!6.07e-27!9;UBERON:0002104!6.07e-27!9;UBERON:0001456!6.07e-27!9;UBERON:0003072!6.07e-27!9;UBERON:0003071!6.07e-27!9;UBERON:0004128!6.07e-27!9;UBERON:0001444!6.19e-22!11;UBERON:0000020!4.70e-20!12;UBERON:0001032!4.70e-20!12;UBERON:0004456!4.70e-20!12;UBERON:0005085!1.84e-18!13;UBERON:0000033!3.65e-18!63;UBERON:0003056!2.64e-15!49;UBERON:0002346!8.23e-14!71;UBERON:0003075!8.23e-14!71;UBERON:0007284!8.23e-14!71;UBERON:0007811!1.06e-12!86;UBERON:0000153!2.02e-11!94;UBERON:0004121!2.44e-10!102;UBERON:0000924!2.44e-10!102;UBERON:0006601!2.44e-10!102;UBERON:0002616!5.16e-07!49;UBERON:0000955!7.54e-07!50;UBERON:0006238!7.54e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.74e-18,4;UBERON:0002680,1.74e-18,4;UBERON:0001895,1.74e-18,4;UBERON:0010092,1.74e-18,4;UBERON:0006215,1.74e-18,4;UBERON:0000970,3.94e-18,9;UBERON:0000019,3.94e-18,9;UBERON:0000047,3.94e-18,9;UBERON:0010312,3.94e-18,9;UBERON:0004088,3.94e-18,9;UBERON:0002104,3.94e-18,9;UBERON:0001456,3.94e-18,9;UBERON:0003072,3.94e-18,9;UBERON:0004128,3.94e-18,9;UBERON:0003071,3.94e-18,9;UBERON:0001444,5.33e-15,11;UBERON:0000020,8.01e-14,12;UBERON:0001032,8.01e-14,12;UBERON:0004456,8.01e-14,12;UBERON:0000033,7.96e-13,13;UBERON:0005085,7.96e-13,13;UBERON:0004733,1.08e-12,6;UBERON:0004732,1.08e-12,6;UBERON:0002028,1.08e-12,6;UBERON:0007277,1.08e-12,6;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64;UBERON:0003076,7.73e-07,12;UBERON:0003057,7.73e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191690942036473,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46390398505774,1.46612694769419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.459804208866946,0.180062129805349,1.20563854268572,0.340182495756639,1.5373646434182,1.3118241438362,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:79296458..79296461,- | |||
}} |
Revision as of 00:43, 14 September 2013
Short description: | p@chr2:79296458..79296461, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:79296458..79296461, - |
Coexpression cluster: | MCL_coexpression_mm9:403 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.74e-18 | 4 |
regional part of metencephalon | 1.74e-18 | 4 |
metencephalon | 1.74e-18 | 4 |
future metencephalon | 1.74e-18 | 4 |
rhombic lip | 1.74e-18 | 4 |
eye | 3.94e-18 | 9 |
camera-type eye | 3.94e-18 | 9 |
simple eye | 3.94e-18 | 9 |
immature eye | 3.94e-18 | 9 |
ocular region | 3.94e-18 | 9 |
visual system | 3.94e-18 | 9 |
face | 3.94e-18 | 9 |
optic cup | 3.94e-18 | 9 |
optic vesicle | 3.94e-18 | 9 |
eye primordium | 3.94e-18 | 9 |
subdivision of head | 5.33e-15 | 11 |
sense organ | 8.01e-14 | 12 |
sensory system | 8.01e-14 | 12 |
entire sense organ system | 8.01e-14 | 12 |
head | 7.96e-13 | 13 |
ectodermal placode | 7.96e-13 | 13 |
segmental subdivision of hindbrain | 1.08e-12 | 6 |
segmental subdivision of nervous system | 1.08e-12 | 6 |
hindbrain | 1.08e-12 | 6 |
presumptive hindbrain | 1.08e-12 | 6 |
neurectoderm | 2.08e-07 | 64 |
neural plate | 2.08e-07 | 64 |
presumptive neural plate | 2.08e-07 | 64 |
posterior neural tube | 7.73e-07 | 12 |
chordal neural plate | 7.73e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.