FFCP PHASE1:Mm9::chr9:122026498..122026509,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20623|HGNC=|MCL_coexpression_id=800|UniProt=Q8VDU5|association_with_transcript=5bp_to_ENSMUST00000118886_5end|description=CAGE_peak_3_at_Snrk_5end|id=chr9:122026498..122026509,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.12e-10,14;UBERON:0000117,2.12e-10,14;UBERON:0000171,2.12e-10,14;UBERON:0000170,2.12e-10,14;UBERON:0005597,2.12e-10,14;UBERON:0000118,2.12e-10,14;UBERON:0005153,6.28e-10,17;UBERON:0005178,4.11e-08,17;UBERON:0005181,4.11e-08,17;UBERON:0002224,4.11e-08,17;UBERON:0000915,4.11e-08,17;UBERON:0008947,4.11e-08,17;UBERON:0003258,4.11e-08,17;UBERON:0005157,5.24e-08,20|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.90739263392049,1.00179145989269,0.16787927191189,0.467225281191051,0.258246646883153,0.140788722151667,0,0,0,0.513602189793617,0.34968160967599,0,0.202475267389826,0,0.630924330716475,0.137114433605739,0.84877930359606,1.27564935226605,0,0.261199789138935,0.159992422793407,0.22940928106717,0.57423196411502,0.430761996159075,0.430942465371778,0,0,0,0,0,0,0.577703239502549,0.166234645358492,0,0.418531630736908,1.5626706890476,1.0470474879476,2.94115744015507,0.683045484958446,0,0.251793635951155,0.101376931219515,0,0.782391344348039,0.218025156380447,0,0,0,0,0.503347818173209,0,0.336093799142464,0.257259436035947,0.286533439938757,0.515672092277442,1.01158230429799,0,0,0.338844532069132,0,0,0,0,0,0,0,0.135005938331691,0,0.571301968807607,0.441737081903227,0.122490799214954,0.191690942036473,0,0,0.510749352340751,0.614426133024974,0.131886287730194,0.365950574409639,0,0,0.56276261003168,0.30559649555362,0.883885756421003,0.427115042397309,0.186399445825301,0,0.151143120213571,12.1743085254705,6.0229671388697,0,0,2.59910566979068,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,2.16949371466214,2.58937883647172,0.742210695324124,0.520455980298408,0.913396434936424,1.84492397804847,1.05505848386836,1.05829836422134,0.628332956648377,0.494389935468748,2.02439099687876,0,0,0.883366073841574,0.484875253135222,0,1.75668478206928,1.67557365450764,0,0,0,0,0.299581278809645,1.37250180845588,0.376963056338593,0,0.255715457330331,0.83115217823824,0.973447578406546,1.12023300235348,0.248813941220186,0.252722758433675,0.420883711772948,0.260240885925407,0.229902104433473,0,0.60281927134286,0.408218994907967,0.384341160854549,0.937017245597288,0.517406741478031,0,0,0.175951124163949,0.657587197282725,0.556094498451196,0,0.411564272815887,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,1.44049649168812,0.23674473558521,0.787056926989615,0.771335564436891,0,1.3413670069981,1.5179494507732,0.822799249567402,1.14917224855367,2.99954595319666,4.23979963533464,1.53685080703735,3.08674763148855,0.210289948564127,0.514523061896422,0,0.264450566663544,0,0,0.257734922644187,0.80673409849337,0.667134131534611,0.570676878337677,0.949058123089023,0.164698954724011,0.251335208800269,0.596869416123452,0.58489226135736,1.79763881730844,0.648414149624083,0.796565093017469,0.189667900953082,0,0,0.814605311381257,0.387904974335251,0.631222379012867,1.13825766823663,0.442830443938806,0.627994911365499,0.863780147452604,1.1858105083486,0.333690211432188,0.196558995113203,0,0.202860121388503,0.241177159752417,0.25462585178142,0.863088412352432,0.648540907100142,0,1.43768206527355,0.744281895337007,1.24815069245824,1.01031551178845,1.61457672169721,0,3.14080423283228,0,0.651859905768103,0,1.17345124144251,2.68010011906905,3.09456733151818,3.12213836572478,1.7339865851681,0.664394068946325,1.59454768657487,2.45794972073607,2.41758974612254,3.7608755231193,0,0,1.96705709207614,0.827810238914197,0.160550589987792,0.820481806145422,0,1.26235463602186,0,0.390438744296638,0.215423397732799,0,0,0,0.809621403349789,0,0.395287777946524,1.28528526568723,0.709700426041343,0,0.162886959353576,0.329940245945071,0,1.45668381692989,0,0.377210159511796,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,0.948110273807448,1.05418608574999,0,0,0.540183282093931,0.517434735131018,0.214337035031592,0.709360934569094,0.356737635204141,0.987294123612726,0.608929898229199,0.469343416127421,0.42366414172764,0.220528398054962,0.49465875882444,0.807322133479528,0.180938774784468,0.477489376012546,0.820704498725306,0,0.741701208042039,0.170870880797853,0.82554747185289,0.185194527369712,0.376736914009382,0.136694227721025,0.228778173206523,0,0.139951452323658,0,0,0,0.609958401380546,0.216010681643603,0.418176592028937,0.218362563746178,0,0.41326727862668,0.785267825952089,1.68499465279331,0,0,0.448549638131936,0.330916980914195,0.194451188344048,0.387479470433193,0.506868376472335,0.352071715937262,0,0.314578033277133,0.241584120826006,0.288030006257865,0.316011120628178,0.405450430580328,0.102710957164827,0.25984164595559,0,0.198681354781265,0.240390899039938,0.147689527174577,0.403865799792591,0.076206806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| ||
|EntrezGene=20623 | |||
|HGNC= | |||
|MCL_coexpression_id=800 | |||
|UniProt=Q8VDU5 | |||
|association_with_transcript=5bp_to_ENSMUST00000118886_5end | |||
|description=CAGE_peak_3_at_Snrk_5end | |||
|id=chr9:122026498..122026509,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.12e-10,14;UBERON:0000117,2.12e-10,14;UBERON:0000171,2.12e-10,14;UBERON:0000170,2.12e-10,14;UBERON:0005597,2.12e-10,14;UBERON:0000118,2.12e-10,14;UBERON:0005153,6.28e-10,17;UBERON:0005178,4.11e-08,17;UBERON:0005181,4.11e-08,17;UBERON:0002224,4.11e-08,17;UBERON:0000915,4.11e-08,17;UBERON:0008947,4.11e-08,17;UBERON:0003258,4.11e-08,17;UBERON:0005157,5.24e-08,20 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.90739263392049,1.00179145989269,0.16787927191189,0.467225281191051,0.258246646883153,0.140788722151667,0,0,0,0.513602189793617,0.34968160967599,0,0.202475267389826,0,0.630924330716475,0.137114433605739,0.84877930359606,1.27564935226605,0,0.261199789138935,0.159992422793407,0.22940928106717,0.57423196411502,0.430761996159075,0.430942465371778,0,0,0,0,0,0,0.577703239502549,0.166234645358492,0,0.418531630736908,1.5626706890476,1.0470474879476,2.94115744015507,0.683045484958446,0,0.251793635951155,0.101376931219515,0,0.782391344348039,0.218025156380447,0,0,0,0,0.503347818173209,0,0.336093799142464,0.257259436035947,0.286533439938757,0.515672092277442,1.01158230429799,0,0,0.338844532069132,0,0,0,0,0,0,0,0.135005938331691,0,0.571301968807607,0.441737081903227,0.122490799214954,0.191690942036473,0,0,0.510749352340751,0.614426133024974,0.131886287730194,0.365950574409639,0,0,0.56276261003168,0.30559649555362,0.883885756421003,0.427115042397309,0.186399445825301,0,0.151143120213571,12.1743085254705,6.0229671388697,0,0,2.59910566979068,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,2.16949371466214,2.58937883647172,0.742210695324124,0.520455980298408,0.913396434936424,1.84492397804847,1.05505848386836,1.05829836422134,0.628332956648377,0.494389935468748,2.02439099687876,0,0,0.883366073841574,0.484875253135222,0,1.75668478206928,1.67557365450764,0,0,0,0,0.299581278809645,1.37250180845588,0.376963056338593,0,0.255715457330331,0.83115217823824,0.973447578406546,1.12023300235348,0.248813941220186,0.252722758433675,0.420883711772948,0.260240885925407,0.229902104433473,0,0.60281927134286,0.408218994907967,0.384341160854549,0.937017245597288,0.517406741478031,0,0,0.175951124163949,0.657587197282725,0.556094498451196,0,0.411564272815887,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,1.44049649168812,0.23674473558521,0.787056926989615,0.771335564436891,0,1.3413670069981,1.5179494507732,0.822799249567402,1.14917224855367,2.99954595319666,4.23979963533464,1.53685080703735,3.08674763148855,0.210289948564127,0.514523061896422,0,0.264450566663544,0,0,0.257734922644187,0.80673409849337,0.667134131534611,0.570676878337677,0.949058123089023,0.164698954724011,0.251335208800269,0.596869416123452,0.58489226135736,1.79763881730844,0.648414149624083,0.796565093017469,0.189667900953082,0,0,0.814605311381257,0.387904974335251,0.631222379012867,1.13825766823663,0.442830443938806,0.627994911365499,0.863780147452604,1.1858105083486,0.333690211432188,0.196558995113203,0,0.202860121388503,0.241177159752417,0.25462585178142,0.863088412352432,0.648540907100142,0,1.43768206527355,0.744281895337007,1.24815069245824,1.01031551178845,1.61457672169721,0,3.14080423283228,0,0.651859905768103,0,1.17345124144251,2.68010011906905,3.09456733151818,3.12213836572478,1.7339865851681,0.664394068946325,1.59454768657487,2.45794972073607,2.41758974612254,3.7608755231193,0,0,1.96705709207614,0.827810238914197,0.160550589987792,0.820481806145422,0,1.26235463602186,0,0.390438744296638,0.215423397732799,0,0,0,0.809621403349789,0,0.395287777946524,1.28528526568723,0.709700426041343,0,0.162886959353576,0.329940245945071,0,1.45668381692989,0,0.377210159511796,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,0.948110273807448,1.05418608574999,0,0,0.540183282093931,0.517434735131018,0.214337035031592,0.709360934569094,0.356737635204141,0.987294123612726,0.608929898229199,0.469343416127421,0.42366414172764,0.220528398054962,0.49465875882444,0.807322133479528,0.180938774784468,0.477489376012546,0.820704498725306,0,0.741701208042039,0.170870880797853,0.82554747185289,0.185194527369712,0.376736914009382,0.136694227721025,0.228778173206523,0,0.139951452323658,0,0,0,0.609958401380546,0.216010681643603,0.418176592028937,0.218362563746178,0,0.41326727862668,0.785267825952089,1.68499465279331,0,0,0.448549638131936,0.330916980914195,0.194451188344048,0.387479470433193,0.506868376472335,0.352071715937262,0,0.314578033277133,0.241584120826006,0.288030006257865,0.316011120628178,0.405450430580328,0.102710957164827,0.25984164595559,0,0.198681354781265,0.240390899039938,0.147689527174577,0.403865799792591,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0.467507608726276,1.13365191807606,0,0,0,0,1.12609485270709,0.73260649706906,0.428736758158132,0,1.12950368523413,0,0,0.343706364687375,0.685082519770642,0.755393897389701,0,0.900642406448441,0,0,0,0.399024873401031,0,0.486213434136588,0.419226325255965,0.919217542250071,1.11123363900808,0.412070114477788,0.64183841918363,0.252697211763798,0.760437899670719,0.943131706930381,0.749132059759059,0.960377286073039,1.14870937911227,2.38146845641537,1.15884325944855,0.964546102318525,0.824171801606613,1.32479028120958,1.02860775715625,0.354951612318675,0.953744759789284,0.726732083161643,0.564656282491984,0.676916863133412,1.09756783723664,1.31534855718921,0.543216455383447,0,0.118635018124174,0.88654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| |||
|short_description=p3@Snrk | |||
}} |
Revision as of 17:14, 14 September 2013
Short description: | p3@Snrk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Snrk_5end |
Coexpression cluster: | MCL_coexpression_mm9:800 |
Association with transcript: | 5bp_to_ENSMUST00000118886_5end |
EntrezGene: | Snrk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 2.12e-10 | 14 |
respiratory tube | 2.12e-10 | 14 |
respiration organ | 2.12e-10 | 14 |
pair of lungs | 2.12e-10 | 14 |
lung primordium | 2.12e-10 | 14 |
lung bud | 2.12e-10 | 14 |
epithelial bud | 6.28e-10 | 17 |
thoracic cavity element | 4.11e-08 | 17 |
thoracic segment organ | 4.11e-08 | 17 |
thoracic cavity | 4.11e-08 | 17 |
thoracic segment of trunk | 4.11e-08 | 17 |
respiratory primordium | 4.11e-08 | 17 |
endoderm of foregut | 4.11e-08 | 17 |
epithelial fold | 5.24e-08 | 20 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.