FFCP PHASE1:Mm9::chr12:83717872..83717958,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=50779|HGNC=|MCL_coexpression_id=1|UniProt=B1B1E4|association_with_transcript=0bp_to_ENSMUST00000161801_5end|description=CAGE_peak_1_at_Rgs6_5end|id=chr12:83717872..83717958,+|ontology_enrichment_celltype=CL:0000117!9.78e-12!23;CL:0000337!9.78e-12!23;CL:0000540!8.65e-10!33;CL:0000047!8.65e-10!33;CL:0000031!8.65e-10!33;CL:0000404!8.65e-10!33;CL:0000393!3.60e-07!39;CL:0000211!3.60e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.93e-13,23;CL:0000337,3.93e-13,23;CL:0000540,1.23e-11,33;CL:0000047,1.23e-11,33;CL:0000031,1.23e-11,33;CL:0000404,1.23e-11,33;CL:0000393,1.15e-08,39;CL:0000211,1.15e-08,39;CL:0000221,9.60e-08,44;CL:0000133,9.60e-08,44;CL:0002319,1.97e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.50e-22!73;UBERON:0005743!9.50e-22!73;UBERON:0000033!1.69e-21!63;UBERON:0001049!2.37e-20!52;UBERON:0005068!2.37e-20!52;UBERON:0006241!2.37e-20!52;UBERON:0007135!2.37e-20!52;UBERON:0000073!2.78e-20!75;UBERON:0001016!2.78e-20!75;UBERON:0000955!6.02e-20!50;UBERON:0006238!6.02e-20!50;UBERON:0004121!1.31e-19!102;UBERON:0000924!1.31e-19!102;UBERON:0006601!1.31e-19!102;UBERON:0002346!2.23e-19!71;UBERON:0003075!2.23e-19!71;UBERON:0007284!2.23e-19!71;UBERON:0002616!2.35e-19!49;UBERON:0003056!8.71e-18!49;UBERON:0003080!3.31e-17!40;UBERON:0002020!3.58e-17!34;UBERON:0002780!1.54e-16!39;UBERON:0001890!1.54e-16!39;UBERON:0006240!1.54e-16!39;UBERON:0002791!4.91e-15!29;UBERON:0003528!4.91e-15!29;UBERON:0001893!4.91e-15!29;UBERON:0004111!7.66e-15!122;UBERON:0000025!4.14e-14!114;UBERON:0000956!5.53e-11!21;UBERON:0001869!5.53e-11!21;UBERON:0000203!5.53e-11!21;UBERON:0000468!9.14e-10!333;UBERON:0002619!7.29e-09!17;UBERON:0007811!1.41e-08!86;UBERON:0002021!2.40e-08!10;UBERON:0000411!2.40e-08!10;UBERON:0001950!2.40e-08!10;UBERON:0000153!1.23e-07!94;UBERON:0000922!2.98e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.36e-25,92;UBERON:0001017,2.33e-24,73;UBERON:0000073,4.16e-23,54;UBERON:0001016,6.64e-23,75;UBERON:0002346,1.81e-22,64;UBERON:0003075,1.81e-22,64;UBERON:0007284,1.81e-22,64;UBERON:0004121,2.41e-22,95;UBERON:0000924,2.41e-22,95;UBERON:0006601,2.41e-22,95;UBERON:0010371,5.92e-22,73;UBERON:0001049,1.29e-21,52;UBERON:0005068,1.29e-21,52;UBERON:0006241,1.29e-21,52;UBERON:0007135,1.29e-21,52;UBERON:0000955,5.22e-19,47;UBERON:0006238,5.22e-19,47;UBERON:0002616,2.31e-18,46;UBERON:0002020,2.80e-18,34;UBERON:0003056,3.87e-18,49;UBERON:0003080,6.94e-18,40;UBERON:0002780,3.85e-17,39;UBERON:0001890,3.85e-17,39;UBERON:0006240,3.85e-17,39;UBERON:0003528,7.52e-16,29;UBERON:0002791,7.52e-16,29;UBERON:0001893,7.52e-16,29;UBERON:0004111,1.83e-15,122;UBERON:0000025,6.49e-15,114;UBERON:0000956,2.83e-11,21;UBERON:0001869,2.83e-11,21;UBERON:0000203,2.83e-11,21;UBERON:0002021,2.81e-09,10;UBERON:0000411,2.81e-09,10;UBERON:0001950,2.81e-09,10;UBERON:0002619,6.79e-09,17|phase1_expression=8.96833543786846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25216450755349,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.972149495371417,0,1.43752564364972,0,0,0,0.257259436035947,2.86533439938757,0.515672092277442,8.49729135610311,7.40587370980846,5.07065122804943,0,0,0,0,0,1.49800055259202,1.53687322128622,7.56934169851887,9.18040380655497,8.83364837675805,8.2838785477103,6.40518768759679,4.5321595709533,3.06705507258356,7.35375029288017,15.4162233399144,16.98241596533,14.2854075928306,5.53922408466814,6.95306091378313,5.2091337055676,17.3093459380856,13.5063026407603,14.6686317865738,7.95497180778903,6.69146899755784,3.54158947068071,0.075726193333184,0,0.289864488701678,0,0,0,0,0,1.54488862144927,0,0,0,4.08445917352373,0,0,0,0,0,0,1.1418387971906,0,0.29688427812965,0.693941307064543,1.21786191324856,0.691846491768175,0.60289056221049,0.705532242814229,0.376999773989026,0.247194967734374,0.722996784599558,0,0.647067399789637,0.441683036920787,0.484875253135222,1.86391761218122,3.51336956413857,5.23616767033638,1.02182822083437,0,0,0,22.0192239925089,6.8625090422794,15.5811396619952,21.38039138365,24.2929684463814,15.1685272528479,13.7905073607594,1.32391173005411,0.497627882440372,0.505445516867349,1.68353484709179,0.780722657776222,3.21862946206862,2.34080768746954,2.41127708537144,2.24520447199382,2.0498195245576,1.87403449119458,6.98499100995342,0.431135985865684,0.378212160335639,0.527853372491847,1.53437012699302,0.556094498451196,1.39300866608867,0.823128545631774,0.59710280045548,0,0,0,2.69263504296152,2.57978665979206,3.24111710629827,4.97163944728941,7.08351234290654,6.47921874126989,7.44108623201305,7.51165523918934,6.42209383019432,11.1900697941167,9.85004784474571,12.7278030986993,11.5497990066013,9.87975518809728,11.9443712696731,5.46753866266731,9.15851050175631,0.330418782983798,0.264450566663544,0.426576501070468,0.696710015581316,0.128867461322093,0.605050573870028,1.55664630691409,1.33157938278791,2.37264530772256,0.658795818896044,3.01602250560323,1.39269530428806,4.09424582950152,8.08937467788799,1.94524244887225,0.995706366271836,0.189667900953082,0.913988100877831,0,1.4255592949172,1.55161989734101,1.68325967736765,4.17361145020098,4.42830443938806,4.39596437955849,6.16985819609003,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0,0.324270453550071,0.823684239564244,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,2.95605104266567,2.08440552947533,0.325929952884052,1.52770577197669,1.40814148973101,2.84760637651087,1.90434912708811,1.95133647857799,4.41378403497335,3.10050565508285,7.49437412690189,4.58817281204066,6.04397436530635,4.05017364028232,0,0,0.491764273019036,0.275936746304732,17.9816660786327,17.5817529888305,0,2.01976741763498,1.57754109708128,1.95219372148319,3.44677436372478,0,0,0,2.02405350837447,2.63030272120181,3.55759000151871,11.2462460747632,0.567760340833074,1.24645922567079,0.81443479676788,1.15479086080775,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0,0.516856586336442,1.09060118843252,0.356497378384721,0.948110273807448,1.05418608574999,2.06271086496374,0.680879211507576,1.44048875225048,1.4229455216103,3.64372959553707,4.25616560741457,3.74574516964348,4.11372551505302,1.8267896946876,0,0,1.7642271844397,1.31909002353184,1.93757312035087,1.20625849856312,1.55184047204077,2.1338316966858,1.45740418314925,13.7214723487777,0,2.27025554759545,0.185194527369712,0.188368457004691,0.410082683163076,0.228778173206523,0,0,0,0,0.632671987162271,0.609958401380546,0.756037385752609,0.836353184057875,0.87345025498471,0.809186078308924,2.89287095038676,2.09404753587224,1.94422459937689,3.10669656543463,0.56369293868419,0.448549638131936,0.330916980914195,0.583353565032143,0.516639293910924,0.506868376472335,0.58678619322877,0.39061315453185,0.419437377702843,0,0.288030006257865,0,0.405450430580328,0.821687657318618,0.25984164595559,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0.15241361331,0.201652370273681,0,0,0,0.453460767230423,0,0.0897138566094757,0.167884616364078,6.37525660306228,0.187682475451182,0,0,0.501572104035363,41.2268845110459,29.9211403729665,29.7905666988486,31.2772791865511,33.5690434687615,41.5466643564335,24.9758325085768,32.4231266321439,29.9073989929575,32.6188996403647,0.103787347584177,1.99512436700516,1.19513524027894,1.94485373654635,1.04806581313991,3.8607136774503,2.44471400581777,2.67845574410562,3.20919209591815,2.27427490587418,1.52087579934144,1.88626341386076,2.34103768674706,2.88113185821912,2.92920891673628,2.85776214769844,3.70829843023538,2.50781986602817,2.06042950401653,3.53277408322554,2.05721551431249,2.48466128623072,3.09967046931517,2.47088908274958,3.10560955370591,2.96151127620868,2.74391959309159,1.57841826862706,2.30866993537965,2.80571135828869,4.03359061622192,3.54616136552028,1.22769312950907,2.32405261778949,2.3148793317737,3.2475375131933,3.04111090979031,2.57845264857958,1.91288332068843,1.54413993383661,1.15933917810211|short_description=p1@Rgs6}} | ||
|EntrezGene=50779 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=B1B1E4 | |||
|association_with_transcript=0bp_to_ENSMUST00000161801_5end | |||
|description=CAGE_peak_1_at_Rgs6_5end | |||
|id=chr12:83717872..83717958,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.78e-12!23;CL:0000337!9.78e-12!23;CL:0000540!8.65e-10!33;CL:0000047!8.65e-10!33;CL:0000031!8.65e-10!33;CL:0000404!8.65e-10!33;CL:0000393!3.60e-07!39;CL:0000211!3.60e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.93e-13,23;CL:0000337,3.93e-13,23;CL:0000540,1.23e-11,33;CL:0000047,1.23e-11,33;CL:0000031,1.23e-11,33;CL:0000404,1.23e-11,33;CL:0000393,1.15e-08,39;CL:0000211,1.15e-08,39;CL:0000221,9.60e-08,44;CL:0000133,9.60e-08,44;CL:0002319,1.97e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.50e-22!73;UBERON:0005743!9.50e-22!73;UBERON:0000033!1.69e-21!63;UBERON:0001049!2.37e-20!52;UBERON:0005068!2.37e-20!52;UBERON:0006241!2.37e-20!52;UBERON:0007135!2.37e-20!52;UBERON:0000073!2.78e-20!75;UBERON:0001016!2.78e-20!75;UBERON:0000955!6.02e-20!50;UBERON:0006238!6.02e-20!50;UBERON:0004121!1.31e-19!102;UBERON:0000924!1.31e-19!102;UBERON:0006601!1.31e-19!102;UBERON:0002346!2.23e-19!71;UBERON:0003075!2.23e-19!71;UBERON:0007284!2.23e-19!71;UBERON:0002616!2.35e-19!49;UBERON:0003056!8.71e-18!49;UBERON:0003080!3.31e-17!40;UBERON:0002020!3.58e-17!34;UBERON:0002780!1.54e-16!39;UBERON:0001890!1.54e-16!39;UBERON:0006240!1.54e-16!39;UBERON:0002791!4.91e-15!29;UBERON:0003528!4.91e-15!29;UBERON:0001893!4.91e-15!29;UBERON:0004111!7.66e-15!122;UBERON:0000025!4.14e-14!114;UBERON:0000956!5.53e-11!21;UBERON:0001869!5.53e-11!21;UBERON:0000203!5.53e-11!21;UBERON:0000468!9.14e-10!333;UBERON:0002619!7.29e-09!17;UBERON:0007811!1.41e-08!86;UBERON:0002021!2.40e-08!10;UBERON:0000411!2.40e-08!10;UBERON:0001950!2.40e-08!10;UBERON:0000153!1.23e-07!94;UBERON:0000922!2.98e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.36e-25,92;UBERON:0001017,2.33e-24,73;UBERON:0000073,4.16e-23,54;UBERON:0001016,6.64e-23,75;UBERON:0002346,1.81e-22,64;UBERON:0003075,1.81e-22,64;UBERON:0007284,1.81e-22,64;UBERON:0004121,2.41e-22,95;UBERON:0000924,2.41e-22,95;UBERON:0006601,2.41e-22,95;UBERON:0010371,5.92e-22,73;UBERON:0001049,1.29e-21,52;UBERON:0005068,1.29e-21,52;UBERON:0006241,1.29e-21,52;UBERON:0007135,1.29e-21,52;UBERON:0000955,5.22e-19,47;UBERON:0006238,5.22e-19,47;UBERON:0002616,2.31e-18,46;UBERON:0002020,2.80e-18,34;UBERON:0003056,3.87e-18,49;UBERON:0003080,6.94e-18,40;UBERON:0002780,3.85e-17,39;UBERON:0001890,3.85e-17,39;UBERON:0006240,3.85e-17,39;UBERON:0003528,7.52e-16,29;UBERON:0002791,7.52e-16,29;UBERON:0001893,7.52e-16,29;UBERON:0004111,1.83e-15,122;UBERON:0000025,6.49e-15,114;UBERON:0000956,2.83e-11,21;UBERON:0001869,2.83e-11,21;UBERON:0000203,2.83e-11,21;UBERON:0002021,2.81e-09,10;UBERON:0000411,2.81e-09,10;UBERON:0001950,2.81e-09,10;UBERON:0002619,6.79e-09,17 | |||
|phase1_expression=8.96833543786846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25216450755349,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.972149495371417,0,1.43752564364972,0,0,0,0.257259436035947,2.86533439938757,0.515672092277442,8.49729135610311,7.40587370980846,5.07065122804943,0,0,0,0,0,1.49800055259202,1.53687322128622,7.56934169851887,9.18040380655497,8.83364837675805,8.2838785477103,6.40518768759679,4.5321595709533,3.06705507258356,7.35375029288017,15.4162233399144,16.98241596533,14.2854075928306,5.53922408466814,6.95306091378313,5.2091337055676,17.3093459380856,13.5063026407603,14.6686317865738,7.95497180778903,6.69146899755784,3.54158947068071,0.075726193333184,0,0.289864488701678,0,0,0,0,0,1.54488862144927,0,0,0,4.08445917352373,0,0,0,0,0,0,1.1418387971906,0,0.29688427812965,0.693941307064543,1.21786191324856,0.691846491768175,0.60289056221049,0.705532242814229,0.376999773989026,0.247194967734374,0.722996784599558,0,0.647067399789637,0.441683036920787,0.484875253135222,1.86391761218122,3.51336956413857,5.23616767033638,1.02182822083437,0,0,0,22.0192239925089,6.8625090422794,15.5811396619952,21.38039138365,24.2929684463814,15.1685272528479,13.7905073607594,1.32391173005411,0.497627882440372,0.505445516867349,1.68353484709179,0.780722657776222,3.21862946206862,2.34080768746954,2.41127708537144,2.24520447199382,2.0498195245576,1.87403449119458,6.98499100995342,0.431135985865684,0.378212160335639,0.527853372491847,1.53437012699302,0.556094498451196,1.39300866608867,0.823128545631774,0.59710280045548,0,0,0,2.69263504296152,2.57978665979206,3.24111710629827,4.97163944728941,7.08351234290654,6.47921874126989,7.44108623201305,7.51165523918934,6.42209383019432,11.1900697941167,9.85004784474571,12.7278030986993,11.5497990066013,9.87975518809728,11.9443712696731,5.46753866266731,9.15851050175631,0.330418782983798,0.264450566663544,0.426576501070468,0.696710015581316,0.128867461322093,0.605050573870028,1.55664630691409,1.33157938278791,2.37264530772256,0.658795818896044,3.01602250560323,1.39269530428806,4.09424582950152,8.08937467788799,1.94524244887225,0.995706366271836,0.189667900953082,0.913988100877831,0,1.4255592949172,1.55161989734101,1.68325967736765,4.17361145020098,4.42830443938806,4.39596437955849,6.16985819609003,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0,0.324270453550071,0.823684239564244,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,2.95605104266567,2.08440552947533,0.325929952884052,1.52770577197669,1.40814148973101,2.84760637651087,1.90434912708811,1.95133647857799,4.41378403497335,3.10050565508285,7.49437412690189,4.58817281204066,6.04397436530635,4.05017364028232,0,0,0.491764273019036,0.275936746304732,17.9816660786327,17.5817529888305,0,2.01976741763498,1.57754109708128,1.95219372148319,3.44677436372478,0,0,0,2.02405350837447,2.63030272120181,3.55759000151871,11.2462460747632,0.567760340833074,1.24645922567079,0.81443479676788,1.15479086080775,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0,0.516856586336442,1.09060118843252,0.356497378384721,0.948110273807448,1.05418608574999,2.06271086496374,0.680879211507576,1.44048875225048,1.4229455216103,3.64372959553707,4.25616560741457,3.74574516964348,4.11372551505302,1.8267896946876,0,0,1.7642271844397,1.31909002353184,1.93757312035087,1.20625849856312,1.55184047204077,2.1338316966858,1.45740418314925,13.7214723487777,0,2.27025554759545,0.185194527369712,0.188368457004691,0.410082683163076,0.228778173206523,0,0,0,0,0.632671987162271,0.609958401380546,0.756037385752609,0.836353184057875,0.87345025498471,0.809186078308924,2.89287095038676,2.09404753587224,1.94422459937689,3.10669656543463,0.56369293868419,0.448549638131936,0.330916980914195,0.583353565032143,0.516639293910924,0.506868376472335,0.58678619322877,0.39061315453185,0.419437377702843,0,0.288030006257865,0,0.405450430580328,0.821687657318618,0.25984164595559,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0.15241361331,0.201652370273681,0,0,0,0.453460767230423,0,0.0897138566094757,0.167884616364078,6.37525660306228,0.187682475451182,0,0,0.501572104035363,41.2268845110459,29.9211403729665,29.7905666988486,31.2772791865511,33.5690434687615,41.5466643564335,24.9758325085768,32.4231266321439,29.9073989929575,32.6188996403647,0.103787347584177,1.99512436700516,1.19513524027894,1.94485373654635,1.04806581313991,3.8607136774503,2.44471400581777,2.67845574410562,3.20919209591815,2.27427490587418,1.52087579934144,1.88626341386076,2.34103768674706,2.88113185821912,2.92920891673628,2.85776214769844,3.70829843023538,2.50781986602817,2.06042950401653,3.53277408322554,2.05721551431249,2.48466128623072,3.09967046931517,2.47088908274958,3.10560955370591,2.96151127620868,2.74391959309159,1.57841826862706,2.30866993537965,2.80571135828869,4.03359061622192,3.54616136552028,1.22769312950907,2.32405261778949,2.3148793317737,3.2475375131933,3.04111090979031,2.57845264857958,1.91288332068843,1.54413993383661,1.15933917810211 | |||
|short_description=p1@Rgs6 | |||
}} |
Revision as of 23:25, 12 September 2013
Short description: | p1@Rgs6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rgs6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000161801_5end |
EntrezGene: | Rgs6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.