FFCP PHASE1:Mm9::chr9:112067580..112067585,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=113|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:112067580..112067585,-|id=chr9:112067580..112067585,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!3.71e-21!10;UBERON:0000411!3.71e-21!10;UBERON:0001950!3.71e-21!10;UBERON:0007811!1.77e-16!86;UBERON:0002370!1.14e-15!23;UBERON:0000974!1.14e-15!23;UBERON:0004807!1.14e-15!23;UBERON:0005058!1.14e-15!23;UBERON:0003351!1.14e-15!23;UBERON:0009113!1.14e-15!23;UBERON:0003295!1.14e-15!23;UBERON:0009722!1.14e-15!23;UBERON:0005562!1.14e-15!23;UBERON:0007690!1.14e-15!23;UBERON:0006562!6.62e-15!24;UBERON:0003408!6.62e-15!24;UBERON:0001557!6.62e-15!24;UBERON:0001042!6.62e-15!24;UBERON:0008814!6.62e-15!24;UBERON:0009145!6.62e-15!24;UBERON:0000153!1.36e-14!94;UBERON:0002020!1.73e-14!34;UBERON:0002619!2.60e-14!17;UBERON:0000956!1.34e-13!21;UBERON:0001869!1.34e-13!21;UBERON:0000203!1.34e-13!21;UBERON:0000064!1.43e-13!99;UBERON:0002791!4.77e-13!29;UBERON:0003528!4.77e-13!29;UBERON:0001893!4.77e-13!29;UBERON:0000072!5.88e-13!27;UBERON:0004177!6.97e-12!29;UBERON:0000063!4.76e-11!35;UBERON:0001049!1.22e-09!52;UBERON:0005068!1.22e-09!52;UBERON:0006241!1.22e-09!52;UBERON:0007135!1.22e-09!52;UBERON:0002780!5.30e-09!39;UBERON:0001890!5.30e-09!39;UBERON:0006240!5.30e-09!39;UBERON:0003080!1.04e-08!40;UBERON:0000477!2.57e-08!154;UBERON:0002616!8.82e-08!49;UBERON:0000065!1.17e-07!41;UBERON:0000955!1.44e-07!50;UBERON:0006238!1.44e-07!50;UBERON:0001004!2.04e-07!42;UBERON:0002390!9.32e-07!45;UBERON:0003061!9.32e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.03e-13,23;UBERON:0000974,8.03e-13,23;UBERON:0004807,8.03e-13,23;UBERON:0005058,8.03e-13,23;UBERON:0003351,8.03e-13,23;UBERON:0009113,8.03e-13,23;UBERON:0003295,8.03e-13,23;UBERON:0009722,8.03e-13,23;UBERON:0005562,8.03e-13,23;UBERON:0007690,8.03e-13,23;UBERON:0006562,2.57e-12,24;UBERON:0003408,2.57e-12,24;UBERON:0001557,2.57e-12,24;UBERON:0001042,2.57e-12,24;UBERON:0008814,2.57e-12,24;UBERON:0009145,2.57e-12,24;UBERON:0000072,5.04e-11,27;UBERON:0004177,2.61e-10,29;UBERON:0005057,2.61e-10,29;UBERON:0000077,1.19e-08,35;UBERON:0007811,2.00e-08,36;UBERON:0000065,1.81e-07,41;UBERON:0001004,2.64e-07,42;UBERON:0000153,3.79e-07,43;UBERON:0002390,7.45e-07,45;UBERON:0003061,7.45e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502617408451458,0.347648640384553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0.25984164595559,0.179026695667481,0.993406773906324,0.841368146639782,1.03382669022204,0.605798699688886,0.990688486514998,2.52065462842101,1.16949456887703,0.769694733122636,0.584384510907845,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,1.14579102687879,0.343706364687375,0,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0.476872379894642,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr9:112067580..112067585,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=113 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:112067580..112067585,- | |||
|id=chr9:112067580..112067585,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!3.71e-21!10;UBERON:0000411!3.71e-21!10;UBERON:0001950!3.71e-21!10;UBERON:0007811!1.77e-16!86;UBERON:0002370!1.14e-15!23;UBERON:0000974!1.14e-15!23;UBERON:0004807!1.14e-15!23;UBERON:0005058!1.14e-15!23;UBERON:0003351!1.14e-15!23;UBERON:0009113!1.14e-15!23;UBERON:0003295!1.14e-15!23;UBERON:0009722!1.14e-15!23;UBERON:0005562!1.14e-15!23;UBERON:0007690!1.14e-15!23;UBERON:0006562!6.62e-15!24;UBERON:0003408!6.62e-15!24;UBERON:0001557!6.62e-15!24;UBERON:0001042!6.62e-15!24;UBERON:0008814!6.62e-15!24;UBERON:0009145!6.62e-15!24;UBERON:0000153!1.36e-14!94;UBERON:0002020!1.73e-14!34;UBERON:0002619!2.60e-14!17;UBERON:0000956!1.34e-13!21;UBERON:0001869!1.34e-13!21;UBERON:0000203!1.34e-13!21;UBERON:0000064!1.43e-13!99;UBERON:0002791!4.77e-13!29;UBERON:0003528!4.77e-13!29;UBERON:0001893!4.77e-13!29;UBERON:0000072!5.88e-13!27;UBERON:0004177!6.97e-12!29;UBERON:0000063!4.76e-11!35;UBERON:0001049!1.22e-09!52;UBERON:0005068!1.22e-09!52;UBERON:0006241!1.22e-09!52;UBERON:0007135!1.22e-09!52;UBERON:0002780!5.30e-09!39;UBERON:0001890!5.30e-09!39;UBERON:0006240!5.30e-09!39;UBERON:0003080!1.04e-08!40;UBERON:0000477!2.57e-08!154;UBERON:0002616!8.82e-08!49;UBERON:0000065!1.17e-07!41;UBERON:0000955!1.44e-07!50;UBERON:0006238!1.44e-07!50;UBERON:0001004!2.04e-07!42;UBERON:0002390!9.32e-07!45;UBERON:0003061!9.32e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.03e-13,23;UBERON:0000974,8.03e-13,23;UBERON:0004807,8.03e-13,23;UBERON:0005058,8.03e-13,23;UBERON:0003351,8.03e-13,23;UBERON:0009113,8.03e-13,23;UBERON:0003295,8.03e-13,23;UBERON:0009722,8.03e-13,23;UBERON:0005562,8.03e-13,23;UBERON:0007690,8.03e-13,23;UBERON:0006562,2.57e-12,24;UBERON:0003408,2.57e-12,24;UBERON:0001557,2.57e-12,24;UBERON:0001042,2.57e-12,24;UBERON:0008814,2.57e-12,24;UBERON:0009145,2.57e-12,24;UBERON:0000072,5.04e-11,27;UBERON:0004177,2.61e-10,29;UBERON:0005057,2.61e-10,29;UBERON:0000077,1.19e-08,35;UBERON:0007811,2.00e-08,36;UBERON:0000065,1.81e-07,41;UBERON:0001004,2.64e-07,42;UBERON:0000153,3.79e-07,43;UBERON:0002390,7.45e-07,45;UBERON:0003061,7.45e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502617408451458,0.347648640384553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0.25984164595559,0.179026695667481,0.993406773906324,0.841368146639782,1.03382669022204,0.605798699688886,0.990688486514998,2.52065462842101,1.16949456887703,0.769694733122636,0.584384510907845,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,1.14579102687879,0.343706364687375,0,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0.476872379894642,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr9:112067580..112067585,- | |||
}} |
Revision as of 17:02, 14 September 2013
Short description: | p@chr9:112067580..112067585, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:112067580..112067585, - |
Coexpression cluster: | MCL_coexpression_mm9:113 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 8.03e-13 | 23 |
neck | 8.03e-13 | 23 |
respiratory system epithelium | 8.03e-13 | 23 |
hemolymphoid system gland | 8.03e-13 | 23 |
pharyngeal epithelium | 8.03e-13 | 23 |
thymic region | 8.03e-13 | 23 |
pharyngeal gland | 8.03e-13 | 23 |
entire pharyngeal arch endoderm | 8.03e-13 | 23 |
thymus primordium | 8.03e-13 | 23 |
early pharyngeal endoderm | 8.03e-13 | 23 |
pharynx | 2.57e-12 | 24 |
gland of gut | 2.57e-12 | 24 |
upper respiratory tract | 2.57e-12 | 24 |
chordate pharynx | 2.57e-12 | 24 |
pharyngeal arch system | 2.57e-12 | 24 |
pharyngeal region of foregut | 2.57e-12 | 24 |
segment of respiratory tract | 5.04e-11 | 27 |
hemopoietic organ | 2.61e-10 | 29 |
immune organ | 2.61e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 1.19e-08 | 35 |
craniocervical region | 2.00e-08 | 36 |
respiratory tract | 1.81e-07 | 41 |
respiratory system | 2.64e-07 | 42 |
anterior region of body | 3.79e-07 | 43 |
hematopoietic system | 7.45e-07 | 45 |
blood island | 7.45e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.