FFCP PHASE1:Mm9::chr12:98362714..98362737,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:98362714..98362737,+|id=chr12:98362714..98362737,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002679,1.84e-08,1;CL:0000213,3.50e-08,1;CL:0002078,3.50e-08,1;CL:0000115,3.50e-08,1;CL:0002262,3.50e-08,1;CL:1000398,3.50e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.13e-10!22;UBERON:0007499!2.13e-10!22;UBERON:0006925!2.13e-10!22;UBERON:0009497!2.13e-10!22;UBERON:0000015!2.13e-10!22;UBERON:0002423!2.13e-10!22;UBERON:0006235!2.13e-10!22;UBERON:0008835!2.13e-10!22;UBERON:0003894!2.13e-10!22;UBERON:0004161!2.13e-10!22;UBERON:0008836!2.13e-10!22;UBERON:0009854!8.77e-10!23;UBERON:0009856!8.77e-10!23;UBERON:0002365!1.05e-08!25;UBERON:0002330!1.05e-08!25;UBERON:0000466!1.65e-08!79;UBERON:0001264!2.35e-08!12;UBERON:0003922!2.35e-08!12;UBERON:0002114!2.35e-08!12;UBERON:0003923!2.35e-08!12;UBERON:0003924!2.35e-08!12;UBERON:0003921!2.35e-08!12;UBERON:0001045!1.46e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0001264,2.18e-35,12;UBERON:0002075,3.68e-22,19;UBERON:0002323,4.53e-11,37;UBERON:0004458,4.53e-11,37;UBERON:0003886,9.25e-11,38;UBERON:0002553,1.82e-10,39;UBERON:0000949,2.13e-08,72;UBERON:0002394,3.50e-08,1;UBERON:0001281,3.50e-08,1;UBERON:0000353,3.50e-08,1;UBERON:0003497,3.50e-08,1;UBERON:0003909,3.50e-08,1;UBERON:0003928,3.50e-08,1;UBERON:0003835,3.50e-08,1;UBERON:0003513,3.50e-08,1;UBERON:0001280,3.50e-08,1;UBERON:0004647,3.50e-08,1;UBERON:0002294,3.50e-08,1;UBERON:0001173,3.50e-08,1;UBERON:0004912,3.50e-08,1;UBERON:0005171,3.50e-08,1;UBERON:0005177,1.48e-07,79|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63783181922684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.82522401712749,9.28946687441754,0.257734922644187,0.605050573870028,0.444756087689741,0.951128130562796,0,0.164698954724011,0.502670417600539,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0.964708639009667,0.50925170356284,0.575392274901621,0.648540907100142,0.823684239564244,0,1.48856379067401,0.624075346229121,0.505157755894224,0.179397413521912,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5550771761845,3.02323556964751,4.71512699389745,1.77181135728464,5.22639751504677,2.84271122485043,3.27180356529755,2.49548164869305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,2.23651413839534,0.86404272657441,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0,0.13020438484395,0.943734099831398,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.50695859978048,0,0.280924522409647,0.128050304809739,0.114870937911227,0.476293691283074,0,0,0,0.294397840268795,0,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0,0,0,0.197008964751127,0,0.309873682371932,0,0,0,0,0,0,0|short_description=p@chr12:98362714..98362737,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:98362714..98362737,+ | |||
|id=chr12:98362714..98362737,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002679,1.84e-08,1;CL:0000213,3.50e-08,1;CL:0002078,3.50e-08,1;CL:0000115,3.50e-08,1;CL:0002262,3.50e-08,1;CL:1000398,3.50e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.13e-10!22;UBERON:0007499!2.13e-10!22;UBERON:0006925!2.13e-10!22;UBERON:0009497!2.13e-10!22;UBERON:0000015!2.13e-10!22;UBERON:0002423!2.13e-10!22;UBERON:0006235!2.13e-10!22;UBERON:0008835!2.13e-10!22;UBERON:0003894!2.13e-10!22;UBERON:0004161!2.13e-10!22;UBERON:0008836!2.13e-10!22;UBERON:0009854!8.77e-10!23;UBERON:0009856!8.77e-10!23;UBERON:0002365!1.05e-08!25;UBERON:0002330!1.05e-08!25;UBERON:0000466!1.65e-08!79;UBERON:0001264!2.35e-08!12;UBERON:0003922!2.35e-08!12;UBERON:0002114!2.35e-08!12;UBERON:0003923!2.35e-08!12;UBERON:0003924!2.35e-08!12;UBERON:0003921!2.35e-08!12;UBERON:0001045!1.46e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,2.18e-35,12;UBERON:0002075,3.68e-22,19;UBERON:0002323,4.53e-11,37;UBERON:0004458,4.53e-11,37;UBERON:0003886,9.25e-11,38;UBERON:0002553,1.82e-10,39;UBERON:0000949,2.13e-08,72;UBERON:0002394,3.50e-08,1;UBERON:0001281,3.50e-08,1;UBERON:0000353,3.50e-08,1;UBERON:0003497,3.50e-08,1;UBERON:0003909,3.50e-08,1;UBERON:0003928,3.50e-08,1;UBERON:0003835,3.50e-08,1;UBERON:0003513,3.50e-08,1;UBERON:0001280,3.50e-08,1;UBERON:0004647,3.50e-08,1;UBERON:0002294,3.50e-08,1;UBERON:0001173,3.50e-08,1;UBERON:0004912,3.50e-08,1;UBERON:0005171,3.50e-08,1;UBERON:0005177,1.48e-07,79 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63783181922684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.82522401712749,9.28946687441754,0.257734922644187,0.605050573870028,0.444756087689741,0.951128130562796,0,0.164698954724011,0.502670417600539,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0.964708639009667,0.50925170356284,0.575392274901621,0.648540907100142,0.823684239564244,0,1.48856379067401,0.624075346229121,0.505157755894224,0.179397413521912,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5550771761845,3.02323556964751,4.71512699389745,1.77181135728464,5.22639751504677,2.84271122485043,3.27180356529755,2.49548164869305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,2.23651413839534,0.86404272657441,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0,0.13020438484395,0.943734099831398,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.50695859978048,0,0.280924522409647,0.128050304809739,0.114870937911227,0.476293691283074,0,0,0,0.294397840268795,0,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0,0,0,0.197008964751127,0,0.309873682371932,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:98362714..98362737,+ | |||
}} |
Revision as of 23:38, 12 September 2013
Short description: | p@chr12:98362714..98362737, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:98362714..98362737, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural helper lymphocyte | 1.84e-08 | 1 |
lining cell | 3.50e-08 | 1 |
meso-epithelial cell | 3.50e-08 | 1 |
endothelial cell | 3.50e-08 | 1 |
endothelial cell of sinusoid | 3.50e-08 | 1 |
endothelial cell of hepatic sinusoid | 3.50e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
pancreas | 2.18e-35 | 12 |
viscus | 3.68e-22 | 19 |
body cavity | 4.53e-11 | 37 |
body cavity or lining | 4.53e-11 | 37 |
body cavity precursor | 9.25e-11 | 38 |
anatomical cavity | 1.82e-10 | 39 |
endocrine system | 2.13e-08 | 72 |
bile duct | 3.50e-08 | 1 |
hepatic sinusoid | 3.50e-08 | 1 |
parenchyma | 3.50e-08 | 1 |
abdomen blood vessel | 3.50e-08 | 1 |
sinusoid | 3.50e-08 | 1 |
digestive system duct | 3.50e-08 | 1 |
abdominal segment blood vessel | 3.50e-08 | 1 |
trunk blood vessel | 3.50e-08 | 1 |
liver parenchyma | 3.50e-08 | 1 |
liver lobule | 3.50e-08 | 1 |
biliary system | 3.50e-08 | 1 |
biliary tree | 3.50e-08 | 1 |
biliary bud | 3.50e-08 | 1 |
hepatic duct | 3.50e-08 | 1 |
trunk region element | 1.48e-07 | 79 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.