FFCP PHASE1:Mm9::chr13:96731532..96731542,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1658|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:96731532..96731542,-|id=chr13:96731532..96731542,-|ontology_enrichment_celltype=CL:0000791!6.70e-10!9;CL:0000789!6.70e-10!9;CL:0002420!6.70e-10!9;CL:0002419!6.70e-10!9;CL:0000790!6.70e-10!9;CL:0000084!4.87e-08!11;CL:0000827!4.87e-08!11;CL:0000838!2.43e-07!12;CL:0000624!2.55e-07!8;CL:0000542!9.51e-07!13;CL:0000051!9.51e-07!13|ontology_enrichment_celltype_v019_2=CL:0000625,5.15e-19,1;CL:0000791,2.30e-18,9;CL:0000789,2.30e-18,9;CL:0002420,2.30e-18,9;CL:0002419,2.30e-18,9;CL:0000790,2.30e-18,9;CL:0000084,3.43e-15,11;CL:0000827,3.43e-15,11;CL:0000838,5.35e-14,12;CL:0000542,5.49e-13,13;CL:0000051,5.49e-13,13;CL:0000738,4.01e-10,17;CL:0002087,4.01e-10,17;CL:0000624,8.88e-10,8;CL:0002031,4.03e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000007!3.89e-11!8;UBERON:0003296!3.89e-11!8;UBERON:0010133!3.89e-11!8;UBERON:0001894!7.62e-09!10;UBERON:0006222!7.62e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.32e-09,8;UBERON:0003296,1.32e-09,8;UBERON:0010133,1.32e-09,8;UBERON:0001894,7.02e-08,10;UBERON:0006222,7.02e-08,10|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.422366166455,0,0,0,5.13602189793617,0,0,0,0,0.157731082679119,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,7.39406358113421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0,0,0,0.354680467284547,0.535106452806212,0.658196082408484,1.8267896946876,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0.228778173206523,0.509935289981566,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:96731532..96731542,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1658 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:96731532..96731542,- | |||
|id=chr13:96731532..96731542,- | |||
|ontology_enrichment_celltype=CL:0000791!6.70e-10!9;CL:0000789!6.70e-10!9;CL:0002420!6.70e-10!9;CL:0002419!6.70e-10!9;CL:0000790!6.70e-10!9;CL:0000084!4.87e-08!11;CL:0000827!4.87e-08!11;CL:0000838!2.43e-07!12;CL:0000624!2.55e-07!8;CL:0000542!9.51e-07!13;CL:0000051!9.51e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,5.15e-19,1;CL:0000791,2.30e-18,9;CL:0000789,2.30e-18,9;CL:0002420,2.30e-18,9;CL:0002419,2.30e-18,9;CL:0000790,2.30e-18,9;CL:0000084,3.43e-15,11;CL:0000827,3.43e-15,11;CL:0000838,5.35e-14,12;CL:0000542,5.49e-13,13;CL:0000051,5.49e-13,13;CL:0000738,4.01e-10,17;CL:0002087,4.01e-10,17;CL:0000624,8.88e-10,8;CL:0002031,4.03e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!3.89e-11!8;UBERON:0003296!3.89e-11!8;UBERON:0010133!3.89e-11!8;UBERON:0001894!7.62e-09!10;UBERON:0006222!7.62e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.32e-09,8;UBERON:0003296,1.32e-09,8;UBERON:0010133,1.32e-09,8;UBERON:0001894,7.02e-08,10;UBERON:0006222,7.02e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.422366166455,0,0,0,5.13602189793617,0,0,0,0,0.157731082679119,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,7.39406358113421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0,0,0,0.354680467284547,0.535106452806212,0.658196082408484,1.8267896946876,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0.228778173206523,0.509935289981566,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:96731532..96731542,- | |||
}} |
Revision as of 01:20, 13 September 2013
Short description: | p@chr13:96731532..96731542, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:96731532..96731542, - |
Coexpression cluster: | MCL_coexpression_mm9:1658 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 5.15e-19 | 1 |
mature alpha-beta T cell | 2.30e-18 | 9 |
alpha-beta T cell | 2.30e-18 | 9 |
immature T cell | 2.30e-18 | 9 |
mature T cell | 2.30e-18 | 9 |
immature alpha-beta T cell | 2.30e-18 | 9 |
T cell | 3.43e-15 | 11 |
pro-T cell | 3.43e-15 | 11 |
lymphoid lineage restricted progenitor cell | 5.35e-14 | 12 |
lymphocyte | 5.49e-13 | 13 |
common lymphoid progenitor | 5.49e-13 | 13 |
leukocyte | 4.01e-10 | 17 |
nongranular leukocyte | 4.01e-10 | 17 |
CD4-positive, alpha-beta T cell | 8.88e-10 | 8 |
hematopoietic lineage restricted progenitor cell | 4.03e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.32e-09 | 8 |
gland of diencephalon | 1.32e-09 | 8 |
neuroendocrine gland | 1.32e-09 | 8 |
diencephalon | 7.02e-08 | 10 |
future diencephalon | 7.02e-08 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.