FFCP PHASE1:Mm9::chr10:86195163..86195174,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=2597|UniProt=|association_with_transcript=-30bp_to_ENSMUST00000070435_5end|description=CAGE_peak_1_at_ENSMUST00000070435_5end|id=chr10:86195163..86195174,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,2.71e-09,3;CL:0000351,2.71e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!8.72e-13!18;UBERON:0000948!8.72e-13!18;UBERON:0005498!8.72e-13!18;UBERON:0004140!8.72e-13!18;UBERON:0009881!8.72e-13!18;UBERON:0004141!8.72e-13!18;UBERON:0003084!8.72e-13!18;UBERON:0007005!8.72e-13!18;UBERON:0004139!8.72e-13!18;UBERON:0004291!8.72e-13!18;UBERON:0004535!1.02e-11!23;UBERON:0001009!1.02e-11!23;UBERON:0004872!1.78e-09!33;UBERON:0003103!9.65e-08!43|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.66e-27,18;UBERON:0000948,6.66e-27,18;UBERON:0005498,6.66e-27,18;UBERON:0004140,6.66e-27,18;UBERON:0009881,6.66e-27,18;UBERON:0004141,6.66e-27,18;UBERON:0003084,6.66e-27,18;UBERON:0007005,6.66e-27,18;UBERON:0004139,6.66e-27,18;UBERON:0004291,6.66e-27,18;UBERON:0004535,6.73e-24,23;UBERON:0001009,6.73e-24,23;UBERON:0004872,2.57e-18,33;UBERON:0003103,2.12e-11,43;UBERON:0003914,3.44e-10,47;UBERON:0000358,2.71e-09,3;UBERON:0000307,2.71e-09,3;UBERON:0007010,2.71e-09,3;UBERON:0001911,6.89e-08,2;UBERON:0000076,6.89e-08,2;UBERON:0005333,6.89e-08,2;UBERON:0008425,6.89e-08,2;UBERON:0005311,6.89e-08,2;UBERON:0003081,9.51e-08,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,2.47194967734374,2.31358971071859,0,0.808834249737046,0.883366073841574,1.45462575940567,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0.521472960576829,0,0.62336413367868,0,0,0.373220911830279,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0,0,0,0.0937017245597288,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0.703578179943289,1.98068267607116,1.65721314909647,1.18058539048442,1.85120535464854,1.86027155800326,3.21928081679543,4.90414437942112,10.2027106946358,13.6258995185649,10.2957388123237,8.33339928324394,11.6361561104257,13.4206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.280543279561274,0.379419222745544,0.147610147979602,0,0.740382983530803,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0.358794827043824,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,33.4399705652945,16.5562047782839,0.160550589987792,0,0,1.00988370881749,0,0,0,0.238968797952552,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,4.2366414172764,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0.247960367176008,0,0,0,1.12738587736838,0.149516546043979,0,0,0.129159823477731,0.506868376472335,0.469428954583016,0.13020438484395,0.314578033277133,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,2.26730383615211,1.99787358036658,1.52513556236109,1.67884616364078,0,0,0,0,0,0.564751842617067,1.38097570952153,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0.367687016900028,0,0.618105171716683,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0.956441660344217,2.20591419119516,2.08681052058379|short_description=p1@ENSMUST00000070435}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=2597 | |||
|UniProt= | |||
|association_with_transcript=-30bp_to_ENSMUST00000070435_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000070435_5end | |||
|id=chr10:86195163..86195174,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.71e-09,3;CL:0000351,2.71e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!8.72e-13!18;UBERON:0000948!8.72e-13!18;UBERON:0005498!8.72e-13!18;UBERON:0004140!8.72e-13!18;UBERON:0009881!8.72e-13!18;UBERON:0004141!8.72e-13!18;UBERON:0003084!8.72e-13!18;UBERON:0007005!8.72e-13!18;UBERON:0004139!8.72e-13!18;UBERON:0004291!8.72e-13!18;UBERON:0004535!1.02e-11!23;UBERON:0001009!1.02e-11!23;UBERON:0004872!1.78e-09!33;UBERON:0003103!9.65e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.66e-27,18;UBERON:0000948,6.66e-27,18;UBERON:0005498,6.66e-27,18;UBERON:0004140,6.66e-27,18;UBERON:0009881,6.66e-27,18;UBERON:0004141,6.66e-27,18;UBERON:0003084,6.66e-27,18;UBERON:0007005,6.66e-27,18;UBERON:0004139,6.66e-27,18;UBERON:0004291,6.66e-27,18;UBERON:0004535,6.73e-24,23;UBERON:0001009,6.73e-24,23;UBERON:0004872,2.57e-18,33;UBERON:0003103,2.12e-11,43;UBERON:0003914,3.44e-10,47;UBERON:0000358,2.71e-09,3;UBERON:0000307,2.71e-09,3;UBERON:0007010,2.71e-09,3;UBERON:0001911,6.89e-08,2;UBERON:0000076,6.89e-08,2;UBERON:0005333,6.89e-08,2;UBERON:0008425,6.89e-08,2;UBERON:0005311,6.89e-08,2;UBERON:0003081,9.51e-08,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,2.47194967734374,2.31358971071859,0,0.808834249737046,0.883366073841574,1.45462575940567,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0.521472960576829,0,0.62336413367868,0,0,0.373220911830279,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0,0,0,0.0937017245597288,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0.703578179943289,1.98068267607116,1.65721314909647,1.18058539048442,1.85120535464854,1.86027155800326,3.21928081679543,4.90414437942112,10.2027106946358,13.6258995185649,10.2957388123237,8.33339928324394,11.6361561104257,13.4206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.280543279561274,0.379419222745544,0.147610147979602,0,0.740382983530803,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0.358794827043824,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,33.4399705652945,16.5562047782839,0.160550589987792,0,0,1.00988370881749,0,0,0,0.238968797952552,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,4.2366414172764,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0.247960367176008,0,0,0,1.12738587736838,0.149516546043979,0,0,0.129159823477731,0.506868376472335,0.469428954583016,0.13020438484395,0.314578033277133,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,2.26730383615211,1.99787358036658,1.52513556236109,1.67884616364078,0,0,0,0,0,0.564751842617067,1.38097570952153,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0.367687016900028,0,0.618105171716683,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0.956441660344217,2.20591419119516,2.08681052058379 | |||
|short_description=p1@ENSMUST00000070435 | |||
}} |
Revision as of 17:51, 12 September 2013
Short description: | p1@ENSMUST00000070435 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000070435_5end |
Coexpression cluster: | MCL_coexpression_mm9:2597 |
Association with transcript: | -30bp_to_ENSMUST00000070435_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.71e-09 | 3 |
trophoblast cell | 2.71e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 6.66e-27 | 18 |
heart | 6.66e-27 | 18 |
primitive heart tube | 6.66e-27 | 18 |
primary heart field | 6.66e-27 | 18 |
anterior lateral plate mesoderm | 6.66e-27 | 18 |
heart tube | 6.66e-27 | 18 |
heart primordium | 6.66e-27 | 18 |
cardiac mesoderm | 6.66e-27 | 18 |
cardiogenic plate | 6.66e-27 | 18 |
heart rudiment | 6.66e-27 | 18 |
cardiovascular system | 6.73e-24 | 23 |
circulatory system | 6.73e-24 | 23 |
splanchnic layer of lateral plate mesoderm | 2.57e-18 | 33 |
compound organ | 2.12e-11 | 43 |
epithelial tube | 3.44e-10 | 47 |
blastocyst | 2.71e-09 | 3 |
blastula | 2.71e-09 | 3 |
cleaving embryo | 2.71e-09 | 3 |
mammary gland | 6.89e-08 | 2 |
external ectoderm | 6.89e-08 | 2 |
mammary bud | 6.89e-08 | 2 |
mammary ridge | 6.89e-08 | 2 |
mammary placode | 6.89e-08 | 2 |
lateral plate mesoderm | 9.51e-08 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.