FFCP PHASE1:Mm9::chr4:40799136..40799141,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=26|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:40799136..40799141,-|id=chr4:40799136..40799141,-|ontology_enrichment_celltype=CL:0000063!3.73e-07!66;CL:0000144!3.86e-07!121;CL:0000012!3.86e-07!121;CL:0000222!7.79e-07!7|ontology_enrichment_celltype_v019_2=CL:0000213,3.06e-23,1;CL:0002078,3.06e-23,1;CL:0000115,3.06e-23,1;CL:0002262,3.06e-23,1;CL:1000398,3.06e-23,1;CL:0000222,1.55e-13,7;CL:0000215,1.13e-08,3;CL:0002494,1.59e-08,3;CL:0000737,1.59e-08,3;CL:0000746,1.59e-08,3;CL:0000513,1.59e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!5.06e-09!23;UBERON:0001009!5.06e-09!23|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.06e-23,1;UBERON:0001281,3.06e-23,1;UBERON:0000353,3.06e-23,1;UBERON:0003497,3.06e-23,1;UBERON:0003909,3.06e-23,1;UBERON:0003928,3.06e-23,1;UBERON:0003835,3.06e-23,1;UBERON:0003513,3.06e-23,1;UBERON:0001280,3.06e-23,1;UBERON:0004647,3.06e-23,1;UBERON:0002294,3.06e-23,1;UBERON:0001173,3.06e-23,1;UBERON:0004912,3.06e-23,1;UBERON:0005171,3.06e-23,1|phase1_expression=0,0,0.454999239389536,0.30246421130683,1.00179145989269,0.16787927191189,0,0.516493293766305,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0,0.274228867211478,0,0.0850432901510698,0,0,0,0,0.57423196411502,0.430761996159075,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0.782391344348039,0,0,0,0,0,0.838913030288682,1.45072428402269,0.672187598284928,0,0.286533439938757,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.0755715601067855,7.8263411949453,0,0,0,0.649776417447669,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0.493679549740441,0,0.162137619091711,0.146199987425332,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr4:40799136..40799141,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=26 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:40799136..40799141,- | |||
|id=chr4:40799136..40799141,- | |||
|ontology_enrichment_celltype=CL:0000063!3.73e-07!66;CL:0000144!3.86e-07!121;CL:0000012!3.86e-07!121;CL:0000222!7.79e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,3.06e-23,1;CL:0002078,3.06e-23,1;CL:0000115,3.06e-23,1;CL:0002262,3.06e-23,1;CL:1000398,3.06e-23,1;CL:0000222,1.55e-13,7;CL:0000215,1.13e-08,3;CL:0002494,1.59e-08,3;CL:0000737,1.59e-08,3;CL:0000746,1.59e-08,3;CL:0000513,1.59e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!5.06e-09!23;UBERON:0001009!5.06e-09!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.06e-23,1;UBERON:0001281,3.06e-23,1;UBERON:0000353,3.06e-23,1;UBERON:0003497,3.06e-23,1;UBERON:0003909,3.06e-23,1;UBERON:0003928,3.06e-23,1;UBERON:0003835,3.06e-23,1;UBERON:0003513,3.06e-23,1;UBERON:0001280,3.06e-23,1;UBERON:0004647,3.06e-23,1;UBERON:0002294,3.06e-23,1;UBERON:0001173,3.06e-23,1;UBERON:0004912,3.06e-23,1;UBERON:0005171,3.06e-23,1 | |||
|phase1_expression=0,0,0.454999239389536,0.30246421130683,1.00179145989269,0.16787927191189,0,0.516493293766305,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0,0.274228867211478,0,0.0850432901510698,0,0,0,0,0.57423196411502,0.430761996159075,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.125896817975577,0,0.183546752161682,0.782391344348039,0,0,0,0,0,0.838913030288682,1.45072428402269,0.672187598284928,0,0.286533439938757,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.0755715601067855,7.8263411949453,0,0,0,0.649776417447669,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0.493679549740441,0,0.162137619091711,0.146199987425332,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr4:40799136..40799141,- | |||
}} |
Revision as of 04:56, 14 September 2013
Short description: | p@chr4:40799136..40799141, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:40799136..40799141, - |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 3.06e-23 | 1 |
meso-epithelial cell | 3.06e-23 | 1 |
endothelial cell | 3.06e-23 | 1 |
endothelial cell of sinusoid | 3.06e-23 | 1 |
endothelial cell of hepatic sinusoid | 3.06e-23 | 1 |
mesodermal cell | 1.55e-13 | 7 |
barrier cell | 1.13e-08 | 3 |
cardiocyte | 1.59e-08 | 3 |
striated muscle cell | 1.59e-08 | 3 |
cardiac muscle cell | 1.59e-08 | 3 |
cardiac muscle myoblast | 1.59e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bile duct | 3.06e-23 | 1 |
hepatic sinusoid | 3.06e-23 | 1 |
parenchyma | 3.06e-23 | 1 |
abdomen blood vessel | 3.06e-23 | 1 |
sinusoid | 3.06e-23 | 1 |
digestive system duct | 3.06e-23 | 1 |
abdominal segment blood vessel | 3.06e-23 | 1 |
trunk blood vessel | 3.06e-23 | 1 |
liver parenchyma | 3.06e-23 | 1 |
liver lobule | 3.06e-23 | 1 |
biliary system | 3.06e-23 | 1 |
biliary tree | 3.06e-23 | 1 |
biliary bud | 3.06e-23 | 1 |
hepatic duct | 3.06e-23 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.