FFCP PHASE1:Mm9::chr12:114720656..114720681,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=50|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:114720656..114720681,-|id=chr12:114720656..114720681,-|ontology_enrichment_celltype=CL:0000553!4.27e-09!6;CL:0000556!4.27e-09!6|ontology_enrichment_celltype_v019_2=CL:0000553,2.21e-18,6;CL:0000556,2.21e-18,6;CL:0002031,4.56e-13,25;CL:0000050,2.31e-12,9;CL:0000988,4.25e-10,32;CL:0002032,4.25e-10,32;CL:0000037,4.25e-10,32;CL:0000837,4.25e-10,32;CL:0000839,1.23e-08,13;CL:0000945,3.50e-08,1;CL:0000236,3.50e-08,1;CL:0000826,3.50e-08,1;CL:0000763,4.69e-07,16;CL:0002320,7.45e-07,46;CL:0000134,7.45e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!8.04e-09!6;UBERON:0004457!8.04e-09!6;UBERON:0000042!8.04e-09!6;UBERON:0004854!8.04e-09!6;UBERON:0009034!8.04e-09!6;UBERON:0002095!8.04e-09!6;UBERON:0004782!8.04e-09!6;UBERON:0003281!8.04e-09!6;UBERON:0009664!8.04e-09!6;UBERON:0002296!8.04e-09!6;UBERON:0005602!8.04e-09!6;UBERON:0001179!8.04e-09!6;UBERON:0006293!8.04e-09!6;UBERON:0003887!4.42e-07!10;UBERON:0002193!4.49e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0002106,7.56e-18,6;UBERON:0004457,7.56e-18,6;UBERON:0000042,7.56e-18,6;UBERON:0004854,7.56e-18,6;UBERON:0009034,7.56e-18,6;UBERON:0002095,7.56e-18,6;UBERON:0004782,7.56e-18,6;UBERON:0003281,7.56e-18,6;UBERON:0009664,7.56e-18,6;UBERON:0002296,7.56e-18,6;UBERON:0005602,7.56e-18,6;UBERON:0001179,7.56e-18,6;UBERON:0006293,7.56e-18,6;UBERON:0003887,7.71e-11,10;UBERON:0002193,1.61e-10,48;UBERON:0002405,1.61e-10,48;UBERON:0002390,7.77e-09,45;UBERON:0003061,7.77e-09,45;UBERON:0000029,2.16e-08,1;UBERON:0001097,2.16e-08,1;UBERON:0003968,2.16e-08,1;UBERON:0001467,2.16e-08,1;UBERON:0002371,4.69e-07,16;UBERON:0000945,7.30e-07,16;UBERON:0010039,7.30e-07,16;UBERON:0002384,7.45e-07,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.01237633694913,0,7.88655413395594,6.30726394586398,4.2438965179803,0,22.6383368738018,21.1571829202538,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69791296961662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,9.06282592765101,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.883366073841574,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.746441823660558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0.241177159752417,0.50925170356284,0,0.486405680325106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,1.02522528478712,0,0.555583582109135,1.13021074202815,2.46049609897845,1.83022538565218,0,0.839708713941948,2.07299960706636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0.233753804363138,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0.695603506861264|short_description=p@chr12:114720656..114720681,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=50 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:114720656..114720681,- | |||
|id=chr12:114720656..114720681,- | |||
|ontology_enrichment_celltype=CL:0000553!4.27e-09!6;CL:0000556!4.27e-09!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.21e-18,6;CL:0000556,2.21e-18,6;CL:0002031,4.56e-13,25;CL:0000050,2.31e-12,9;CL:0000988,4.25e-10,32;CL:0002032,4.25e-10,32;CL:0000037,4.25e-10,32;CL:0000837,4.25e-10,32;CL:0000839,1.23e-08,13;CL:0000945,3.50e-08,1;CL:0000236,3.50e-08,1;CL:0000826,3.50e-08,1;CL:0000763,4.69e-07,16;CL:0002320,7.45e-07,46;CL:0000134,7.45e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!8.04e-09!6;UBERON:0004457!8.04e-09!6;UBERON:0000042!8.04e-09!6;UBERON:0004854!8.04e-09!6;UBERON:0009034!8.04e-09!6;UBERON:0002095!8.04e-09!6;UBERON:0004782!8.04e-09!6;UBERON:0003281!8.04e-09!6;UBERON:0009664!8.04e-09!6;UBERON:0002296!8.04e-09!6;UBERON:0005602!8.04e-09!6;UBERON:0001179!8.04e-09!6;UBERON:0006293!8.04e-09!6;UBERON:0003887!4.42e-07!10;UBERON:0002193!4.49e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,7.56e-18,6;UBERON:0004457,7.56e-18,6;UBERON:0000042,7.56e-18,6;UBERON:0004854,7.56e-18,6;UBERON:0009034,7.56e-18,6;UBERON:0002095,7.56e-18,6;UBERON:0004782,7.56e-18,6;UBERON:0003281,7.56e-18,6;UBERON:0009664,7.56e-18,6;UBERON:0002296,7.56e-18,6;UBERON:0005602,7.56e-18,6;UBERON:0001179,7.56e-18,6;UBERON:0006293,7.56e-18,6;UBERON:0003887,7.71e-11,10;UBERON:0002193,1.61e-10,48;UBERON:0002405,1.61e-10,48;UBERON:0002390,7.77e-09,45;UBERON:0003061,7.77e-09,45;UBERON:0000029,2.16e-08,1;UBERON:0001097,2.16e-08,1;UBERON:0003968,2.16e-08,1;UBERON:0001467,2.16e-08,1;UBERON:0002371,4.69e-07,16;UBERON:0000945,7.30e-07,16;UBERON:0010039,7.30e-07,16;UBERON:0002384,7.45e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.01237633694913,0,7.88655413395594,6.30726394586398,4.2438965179803,0,22.6383368738018,21.1571829202538,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69791296961662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,9.06282592765101,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.883366073841574,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.746441823660558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0.241177159752417,0.50925170356284,0,0.486405680325106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,1.02522528478712,0,0.555583582109135,1.13021074202815,2.46049609897845,1.83022538565218,0,0.839708713941948,2.07299960706636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0.233753804363138,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0.695603506861264 | |||
|short_description=p@chr12:114720656..114720681,- | |||
}} |
Revision as of 22:27, 12 September 2013
Short description: | p@chr12:114720656..114720681, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114720656..114720681, - |
Coexpression cluster: | MCL_coexpression_mm9:50 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.21e-18 | 6 |
megakaryocyte | 2.21e-18 | 6 |
hematopoietic lineage restricted progenitor cell | 4.56e-13 | 25 |
megakaryocyte-erythroid progenitor cell | 2.31e-12 | 9 |
hematopoietic cell | 4.25e-10 | 32 |
hematopoietic oligopotent progenitor cell | 4.25e-10 | 32 |
hematopoietic stem cell | 4.25e-10 | 32 |
hematopoietic multipotent progenitor cell | 4.25e-10 | 32 |
myeloid lineage restricted progenitor cell | 1.23e-08 | 13 |
lymphocyte of B lineage | 3.50e-08 | 1 |
B cell | 3.50e-08 | 1 |
pro-B cell | 3.50e-08 | 1 |
myeloid cell | 4.69e-07 | 16 |
connective tissue cell | 7.45e-07 | 46 |
mesenchymal cell | 7.45e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
spleen | 7.56e-18 | 6 |
cavity lining | 7.56e-18 | 6 |
serous membrane | 7.56e-18 | 6 |
gastrointestinal system mesentery | 7.56e-18 | 6 |
stomach region | 7.56e-18 | 6 |
mesentery | 7.56e-18 | 6 |
gastrointestinal system serosa | 7.56e-18 | 6 |
mesentery of stomach | 7.56e-18 | 6 |
gut mesentery | 7.56e-18 | 6 |
dorsal mesentery | 7.56e-18 | 6 |
dorsal mesogastrium | 7.56e-18 | 6 |
peritoneal cavity | 7.56e-18 | 6 |
spleen primordium | 7.56e-18 | 6 |
intraembryonic coelom | 7.71e-11 | 10 |
hemolymphoid system | 1.61e-10 | 48 |
immune system | 1.61e-10 | 48 |
hematopoietic system | 7.77e-09 | 45 |
blood island | 7.77e-09 | 45 |
lymph node | 2.16e-08 | 1 |
axillary lymph node | 2.16e-08 | 1 |
peripheral lymph node | 2.16e-08 | 1 |
shoulder | 2.16e-08 | 1 |
bone marrow | 4.69e-07 | 16 |
stomach | 7.30e-07 | 16 |
food storage organ | 7.30e-07 | 16 |
connective tissue | 7.45e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.