FFCP PHASE1:Mm9::chr11:96165436..96165453,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1602|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:96165436..96165453,+|id=chr11:96165436..96165453,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000107,5.51e-15,9;CL:0000393,6.32e-08,39;CL:0000211,6.32e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005157!2.95e-13!27;UBERON:0002048!8.01e-10!14;UBERON:0000117!8.01e-10!14;UBERON:0000171!8.01e-10!14;UBERON:0000170!8.01e-10!14;UBERON:0005597!8.01e-10!14;UBERON:0000118!8.01e-10!14;UBERON:0005177!3.30e-09!85;UBERON:0002100!8.26e-09!98;UBERON:0005178!1.07e-08!17;UBERON:0005181!1.07e-08!17;UBERON:0002224!1.07e-08!17;UBERON:0000915!1.07e-08!17;UBERON:0008947!1.07e-08!17;UBERON:0003258!1.07e-08!17;UBERON:0009569!1.70e-08!66;UBERON:0000489!1.87e-08!21;UBERON:0005153!3.37e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0002410,5.51e-15,9;UBERON:0010313,2.95e-12,3;UBERON:0002342,2.95e-12,3;UBERON:0002005,2.95e-12,3;UBERON:0005428,2.95e-12,3;UBERON:0005062,2.95e-12,3;UBERON:0000010,3.75e-12,11;UBERON:0000013,3.81e-12,3;UBERON:0000055,1.22e-11,5;UBERON:0007500,1.22e-11,5;UBERON:0001981,1.22e-11,5;UBERON:0002049,1.22e-11,5;UBERON:0007798,1.22e-11,5;UBERON:0004537,1.22e-11,5;UBERON:0006965,1.22e-11,5;UBERON:0001896,5.87e-09,2;UBERON:0002298,5.87e-09,2;UBERON:0005290,5.87e-09,2;UBERON:0010096,5.87e-09,2;UBERON:0000947,9.80e-09,4;UBERON:0001637,9.80e-09,4;UBERON:0004573,9.80e-09,4;UBERON:0003509,9.80e-09,4;UBERON:0004571,9.80e-09,4;UBERON:0010191,9.80e-09,4;UBERON:0004572,9.80e-09,4;UBERON:0003076,9.81e-08,12;UBERON:0003057,9.81e-08,12;UBERON:0000489,2.64e-07,21|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,1.82478476195126,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,0.220868540951614,0,0,0,0,0,0,0,0,0,0.837548997004143,0,0.15279824777681,0,0.569486723196412,1.4911955666024,0,0,1.15945795480671,0.860423876981386,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,1.01104889002957,0,0,1.63286352971307,0,0.304465478312141,0.230615497256059,0.60289056221049,0.705532242814229,0.502666365318702,0,1.44599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0,0.766371165625774,0,0,0,0,0.457500602818626,0,0,0,0,0,0.101839363850316,0.373220911830279,1.26361379216837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0.213288250535234,0.928946687441754,0.515469845288373,0.403367049246685,1.33426826306922,0.570676878337677,0,0.494096864172033,0.754005626400808,0.397912944082302,0.19496408711912,0,0.216138049874694,0.796565093017469,0.189667900953082,0,1.1270773567308,0.407302655690628,0,0.771494018793504,0.126473074248515,0.590440591918409,0.31399745568275,1.1105744752962,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0.482443521363367,0.739012760666419,0.37898282354097,0.488894929326078,0.509235257325564,0.704070744865506,0.335012514883631,0.238043640886014,0.585400943573396,1.89162172927429,0.664394068946325,1.43509291791738,0.491589944147214,0.690739927463582,1.01254341007058,0,0,0,0,9.9541365792431,6.09500770279457,0,0,2.2085575359138,4.29482618726302,7.32439552291516,0.238968797952552,0,0,4.85772842009873,4.09158201075837,3.55759000151871,0,0.283880170416537,0,0.162886959353576,0.329940245945071,0,0,0.302323556964751,0.188605079755898,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.238744688006273,0,0.874442509889552,7.04616147639937,0,0,0,0,0,0,0,0.139951452323658,0,0.954670618015114,0.474503990371703,0.406638934253697,0.540026704109006,0.209088296014469,0.436725127492355,0.404593039154462,0.41326727862668,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.375364950902364,0.36630324853453,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0,0.192075457214608,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0,0.282328141245992,0.0846146078916765,0,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0,0.385813221962283,0,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0|short_description=p@chr11:96165436..96165453,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1602 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:96165436..96165453,+ | |||
|id=chr11:96165436..96165453,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,5.51e-15,9;CL:0000393,6.32e-08,39;CL:0000211,6.32e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!2.95e-13!27;UBERON:0002048!8.01e-10!14;UBERON:0000117!8.01e-10!14;UBERON:0000171!8.01e-10!14;UBERON:0000170!8.01e-10!14;UBERON:0005597!8.01e-10!14;UBERON:0000118!8.01e-10!14;UBERON:0005177!3.30e-09!85;UBERON:0002100!8.26e-09!98;UBERON:0005178!1.07e-08!17;UBERON:0005181!1.07e-08!17;UBERON:0002224!1.07e-08!17;UBERON:0000915!1.07e-08!17;UBERON:0008947!1.07e-08!17;UBERON:0003258!1.07e-08!17;UBERON:0009569!1.70e-08!66;UBERON:0000489!1.87e-08!21;UBERON:0005153!3.37e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,5.51e-15,9;UBERON:0010313,2.95e-12,3;UBERON:0002342,2.95e-12,3;UBERON:0002005,2.95e-12,3;UBERON:0005428,2.95e-12,3;UBERON:0005062,2.95e-12,3;UBERON:0000010,3.75e-12,11;UBERON:0000013,3.81e-12,3;UBERON:0000055,1.22e-11,5;UBERON:0007500,1.22e-11,5;UBERON:0001981,1.22e-11,5;UBERON:0002049,1.22e-11,5;UBERON:0007798,1.22e-11,5;UBERON:0004537,1.22e-11,5;UBERON:0006965,1.22e-11,5;UBERON:0001896,5.87e-09,2;UBERON:0002298,5.87e-09,2;UBERON:0005290,5.87e-09,2;UBERON:0010096,5.87e-09,2;UBERON:0000947,9.80e-09,4;UBERON:0001637,9.80e-09,4;UBERON:0004573,9.80e-09,4;UBERON:0003509,9.80e-09,4;UBERON:0004571,9.80e-09,4;UBERON:0010191,9.80e-09,4;UBERON:0004572,9.80e-09,4;UBERON:0003076,9.81e-08,12;UBERON:0003057,9.81e-08,12;UBERON:0000489,2.64e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,1.82478476195126,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,0.220868540951614,0,0,0,0,0,0,0,0,0,0.837548997004143,0,0.15279824777681,0,0.569486723196412,1.4911955666024,0,0,1.15945795480671,0.860423876981386,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,1.01104889002957,0,0,1.63286352971307,0,0.304465478312141,0.230615497256059,0.60289056221049,0.705532242814229,0.502666365318702,0,1.44599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0,0.766371165625774,0,0,0,0,0.457500602818626,0,0,0,0,0,0.101839363850316,0.373220911830279,1.26361379216837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0.213288250535234,0.928946687441754,0.515469845288373,0.403367049246685,1.33426826306922,0.570676878337677,0,0.494096864172033,0.754005626400808,0.397912944082302,0.19496408711912,0,0.216138049874694,0.796565093017469,0.189667900953082,0,1.1270773567308,0.407302655690628,0,0.771494018793504,0.126473074248515,0.590440591918409,0.31399745568275,1.1105744752962,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0.482443521363367,0.739012760666419,0.37898282354097,0.488894929326078,0.509235257325564,0.704070744865506,0.335012514883631,0.238043640886014,0.585400943573396,1.89162172927429,0.664394068946325,1.43509291791738,0.491589944147214,0.690739927463582,1.01254341007058,0,0,0,0,9.9541365792431,6.09500770279457,0,0,2.2085575359138,4.29482618726302,7.32439552291516,0.238968797952552,0,0,4.85772842009873,4.09158201075837,3.55759000151871,0,0.283880170416537,0,0.162886959353576,0.329940245945071,0,0,0.302323556964751,0.188605079755898,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.238744688006273,0,0.874442509889552,7.04616147639937,0,0,0,0,0,0,0,0.139951452323658,0,0.954670618015114,0.474503990371703,0.406638934253697,0.540026704109006,0.209088296014469,0.436725127492355,0.404593039154462,0.41326727862668,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.375364950902364,0.36630324853453,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0,0.192075457214608,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0,0.282328141245992,0.0846146078916765,0,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0,0.385813221962283,0,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr11:96165436..96165453,+ | |||
}} |
Revision as of 21:39, 12 September 2013
Short description: | p@chr11:96165436..96165453, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:96165436..96165453, + |
Coexpression cluster: | MCL_coexpression_mm9:1602 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 5.51e-15 | 9 |
electrically responsive cell | 6.32e-08 | 39 |
electrically active cell | 6.32e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 5.51e-15 | 9 |
neural crest-derived structure | 2.95e-12 | 3 |
neural crest | 2.95e-12 | 3 |
enteric nervous system | 2.95e-12 | 3 |
vagal neural crest | 2.95e-12 | 3 |
neural fold | 2.95e-12 | 3 |
peripheral nervous system | 3.75e-12 | 11 |
sympathetic nervous system | 3.81e-12 | 3 |
vessel | 1.22e-11 | 5 |
epithelial tube open at both ends | 1.22e-11 | 5 |
blood vessel | 1.22e-11 | 5 |
vasculature | 1.22e-11 | 5 |
vascular system | 1.22e-11 | 5 |
blood vasculature | 1.22e-11 | 5 |
vascular cord | 1.22e-11 | 5 |
medulla oblongata | 5.87e-09 | 2 |
brainstem | 5.87e-09 | 2 |
myelencephalon | 5.87e-09 | 2 |
future myelencephalon | 5.87e-09 | 2 |
aorta | 9.80e-09 | 4 |
artery | 9.80e-09 | 4 |
systemic artery | 9.80e-09 | 4 |
arterial blood vessel | 9.80e-09 | 4 |
systemic arterial system | 9.80e-09 | 4 |
aortic system | 9.80e-09 | 4 |
arterial system | 9.80e-09 | 4 |
posterior neural tube | 9.81e-08 | 12 |
chordal neural plate | 9.81e-08 | 12 |
cavitated compound organ | 2.64e-07 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.