FFCP PHASE1:Mm9::chr2:180132013..180132038,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=299|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:180132013..180132038,+|id=chr2:180132013..180132038,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!4.24e-12!18;UBERON:0000948!4.24e-12!18;UBERON:0005498!4.24e-12!18;UBERON:0004140!4.24e-12!18;UBERON:0009881!4.24e-12!18;UBERON:0004141!4.24e-12!18;UBERON:0003084!4.24e-12!18;UBERON:0007005!4.24e-12!18;UBERON:0004139!4.24e-12!18;UBERON:0004291!4.24e-12!18;UBERON:0004535!2.53e-08!23;UBERON:0001009!2.53e-08!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,7.07e-30,18;UBERON:0000948,7.07e-30,18;UBERON:0005498,7.07e-30,18;UBERON:0004140,7.07e-30,18;UBERON:0009881,7.07e-30,18;UBERON:0004141,7.07e-30,18;UBERON:0003084,7.07e-30,18;UBERON:0007005,7.07e-30,18;UBERON:0004139,7.07e-30,18;UBERON:0004291,7.07e-30,18;UBERON:0004535,7.89e-23,23;UBERON:0001009,7.89e-23,23;UBERON:0004872,3.90e-15,33;UBERON:0003103,6.41e-13,43;UBERON:0003914,1.17e-11,47;UBERON:0005418,3.94e-07,5;UBERON:0002472,3.94e-07,5;UBERON:0008784,3.94e-07,5;UBERON:0006058,3.94e-07,5;UBERON:0004709,3.94e-07,5;UBERON:0002529,3.94e-07,5;UBERON:0010538,3.94e-07,5;UBERON:0005420,3.94e-07,5;UBERON:0010758,3.94e-07,5;UBERON:0000978,3.94e-07,5;UBERON:0002103,3.94e-07,5;UBERON:0000376,3.94e-07,5;UBERON:0000154,3.94e-07,5;UBERON:0010709,3.94e-07,5;UBERON:0005730,3.94e-07,5;UBERON:0003081,4.61e-07,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0.352766121407114,0,0,0,0.884610551949874,7.44127509758082,7.50861162765338,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.60281927134286,0.544291993210623,0.512454881139399,0.187403449119458,0.776110112217047,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,1.98068267607116,1.65721314909647,1.96764231747404,4.16521204795921,6.27841650826101,2.95100741539581,4.55384835231961,4.93679549740441,8.86504306027114,3.16168357228837,1.90059983652932,2.63460138349261,1.74468344388483,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,4.31304619582064,0.372140947668503,0,0.252578877947112,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0.491589944147214,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,4.03953483526997,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0.49465875882444,0.645857706783622,0.361877549568935,0.119372344003136,0.492422699235184,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0.576060012515731,0,0,0,0,0,0,0,0.295379054349154,0,0,0,0,0,0,2.0405734525369,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0,0.183843508450014,0.888986911206461,0.824140228955577,0,0.505394423527595,0.50695859978048,0.754505365544305,0.749132059759059,0.320125762024346,0.804096565378586,0.476293691283074,0.811190281613988,0.77163688185482,0,0.441596760403192,1.37147700954166,0.70990322463735,1.1921809497366,0.726732083161643,0.658765662907314,0.930760686808441,2.37806364734604,1.57841826862706,1.22223702461276,0.561142271657738,1.30498519936592,1.67457620038458,2.86461730218783,0.464810523557898,0.192906610981141,0.499621155875892,0.467863216890817,0.644613162144895,1.3390183244819,0.661774257358546,0.927471342481686|short_description=p@chr2:180132013..180132038,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=299 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:180132013..180132038,+ | |||
|id=chr2:180132013..180132038,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!4.24e-12!18;UBERON:0000948!4.24e-12!18;UBERON:0005498!4.24e-12!18;UBERON:0004140!4.24e-12!18;UBERON:0009881!4.24e-12!18;UBERON:0004141!4.24e-12!18;UBERON:0003084!4.24e-12!18;UBERON:0007005!4.24e-12!18;UBERON:0004139!4.24e-12!18;UBERON:0004291!4.24e-12!18;UBERON:0004535!2.53e-08!23;UBERON:0001009!2.53e-08!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,7.07e-30,18;UBERON:0000948,7.07e-30,18;UBERON:0005498,7.07e-30,18;UBERON:0004140,7.07e-30,18;UBERON:0009881,7.07e-30,18;UBERON:0004141,7.07e-30,18;UBERON:0003084,7.07e-30,18;UBERON:0007005,7.07e-30,18;UBERON:0004139,7.07e-30,18;UBERON:0004291,7.07e-30,18;UBERON:0004535,7.89e-23,23;UBERON:0001009,7.89e-23,23;UBERON:0004872,3.90e-15,33;UBERON:0003103,6.41e-13,43;UBERON:0003914,1.17e-11,47;UBERON:0005418,3.94e-07,5;UBERON:0002472,3.94e-07,5;UBERON:0008784,3.94e-07,5;UBERON:0006058,3.94e-07,5;UBERON:0004709,3.94e-07,5;UBERON:0002529,3.94e-07,5;UBERON:0010538,3.94e-07,5;UBERON:0005420,3.94e-07,5;UBERON:0010758,3.94e-07,5;UBERON:0000978,3.94e-07,5;UBERON:0002103,3.94e-07,5;UBERON:0000376,3.94e-07,5;UBERON:0000154,3.94e-07,5;UBERON:0010709,3.94e-07,5;UBERON:0005730,3.94e-07,5;UBERON:0003081,4.61e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0.352766121407114,0,0,0,0.884610551949874,7.44127509758082,7.50861162765338,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.60281927134286,0.544291993210623,0.512454881139399,0.187403449119458,0.776110112217047,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,1.98068267607116,1.65721314909647,1.96764231747404,4.16521204795921,6.27841650826101,2.95100741539581,4.55384835231961,4.93679549740441,8.86504306027114,3.16168357228837,1.90059983652932,2.63460138349261,1.74468344388483,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,4.31304619582064,0.372140947668503,0,0.252578877947112,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0.491589944147214,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,4.03953483526997,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0.49465875882444,0.645857706783622,0.361877549568935,0.119372344003136,0.492422699235184,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0.576060012515731,0,0,0,0,0,0,0,0.295379054349154,0,0,0,0,0,0,2.0405734525369,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0,0.183843508450014,0.888986911206461,0.824140228955577,0,0.505394423527595,0.50695859978048,0.754505365544305,0.749132059759059,0.320125762024346,0.804096565378586,0.476293691283074,0.811190281613988,0.77163688185482,0,0.441596760403192,1.37147700954166,0.70990322463735,1.1921809497366,0.726732083161643,0.658765662907314,0.930760686808441,2.37806364734604,1.57841826862706,1.22223702461276,0.561142271657738,1.30498519936592,1.67457620038458,2.86461730218783,0.464810523557898,0.192906610981141,0.499621155875892,0.467863216890817,0.644613162144895,1.3390183244819,0.661774257358546,0.927471342481686 | |||
|short_description=p@chr2:180132013..180132038,+ | |||
}} |
Revision as of 23:12, 13 September 2013
Short description: | p@chr2:180132013..180132038, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:180132013..180132038, + |
Coexpression cluster: | MCL_coexpression_mm9:299 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 7.07e-30 | 18 |
heart | 7.07e-30 | 18 |
primitive heart tube | 7.07e-30 | 18 |
primary heart field | 7.07e-30 | 18 |
anterior lateral plate mesoderm | 7.07e-30 | 18 |
heart tube | 7.07e-30 | 18 |
heart primordium | 7.07e-30 | 18 |
cardiac mesoderm | 7.07e-30 | 18 |
cardiogenic plate | 7.07e-30 | 18 |
heart rudiment | 7.07e-30 | 18 |
cardiovascular system | 7.89e-23 | 23 |
circulatory system | 7.89e-23 | 23 |
splanchnic layer of lateral plate mesoderm | 3.90e-15 | 33 |
compound organ | 6.41e-13 | 43 |
epithelial tube | 1.17e-11 | 47 |
hindlimb bud | 3.94e-07 | 5 |
stylopod | 3.94e-07 | 5 |
lower limb segment | 3.94e-07 | 5 |
multi-limb segment region | 3.94e-07 | 5 |
pelvic appendage | 3.94e-07 | 5 |
limb segment | 3.94e-07 | 5 |
paired limb/fin segment | 3.94e-07 | 5 |
pelvic appendage bud | 3.94e-07 | 5 |
subdivision of organism along appendicular axis | 3.94e-07 | 5 |
leg | 3.94e-07 | 5 |
hindlimb | 3.94e-07 | 5 |
hindlimb stylopod | 3.94e-07 | 5 |
posterior region of body | 3.94e-07 | 5 |
pelvic complex | 3.94e-07 | 5 |
hindlimb/pelvic fin field | 3.94e-07 | 5 |
lateral plate mesoderm | 4.61e-07 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.