FFCP PHASE1:Mm9::chr12:37968316..37968345,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=319660|HGNC=|MCL_coexpression_id=265|UniProt=E0CYN0|association_with_transcript=0bp_to_ENSMUST00000160768_5end|description=CAGE_peak_2_at_Agmo_5end|id=chr12:37968316..37968345,+|ontology_enrichment_celltype=CL:0000066!4.16e-07!25;CL:0002563!5.89e-07!9;CL:0002251!5.89e-07!9;CL:0000223!8.25e-07!20|ontology_enrichment_celltype_v019_2=CL:0000066,3.05e-13,25;CL:0000223,6.01e-12,20;CL:0002563,1.46e-09,9;CL:0002251,1.46e-09,9;CL:0000182,1.61e-08,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!5.89e-16!128;UBERON:0001555!5.89e-16!128;UBERON:0007026!5.89e-16!128;UBERON:0000160!9.80e-16!43;UBERON:0009854!2.37e-15!23;UBERON:0009856!2.37e-15!23;UBERON:0004119!2.92e-15!130;UBERON:0000925!2.92e-15!130;UBERON:0006595!2.92e-15!130;UBERON:0002107!7.60e-15!22;UBERON:0007499!7.60e-15!22;UBERON:0006925!7.60e-15!22;UBERON:0009497!7.60e-15!22;UBERON:0000015!7.60e-15!22;UBERON:0002423!7.60e-15!22;UBERON:0006235!7.60e-15!22;UBERON:0008835!7.60e-15!22;UBERON:0003894!7.60e-15!22;UBERON:0004161!7.60e-15!22;UBERON:0008836!7.60e-15!22;UBERON:0004921!8.20e-15!126;UBERON:0004185!8.20e-15!126;UBERON:0002365!1.90e-14!25;UBERON:0002330!1.90e-14!25;UBERON:0005409!1.17e-11!59;UBERON:0000344!3.08e-10!15;UBERON:0001242!6.67e-09!13;UBERON:0000060!6.67e-09!13;UBERON:0001262!6.67e-09!13;UBERON:0004786!6.67e-09!13;UBERON:0003929!2.60e-08!55;UBERON:0005256!5.44e-08!47;UBERON:0005911!2.15e-07!69;UBERON:0003350!5.89e-07!9;UBERON:0004808!5.89e-07!9;UBERON:0001277!5.89e-07!9;UBERON:0005172!8.70e-07!49;UBERON:0005173!8.70e-07!49;UBERON:0002417!8.70e-07!49;UBERON:0000916!8.70e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0009854,5.90e-23,23;UBERON:0009856,5.90e-23,23;UBERON:0001007,9.02e-23,116;UBERON:0001555,9.02e-23,116;UBERON:0007026,9.02e-23,116;UBERON:0004119,3.75e-22,118;UBERON:0000925,3.75e-22,118;UBERON:0006595,3.75e-22,118;UBERON:0002107,5.09e-22,22;UBERON:0007499,5.09e-22,22;UBERON:0006925,5.09e-22,22;UBERON:0009497,5.09e-22,22;UBERON:0000015,5.09e-22,22;UBERON:0002423,5.09e-22,22;UBERON:0006235,5.09e-22,22;UBERON:0008835,5.09e-22,22;UBERON:0003894,5.09e-22,22;UBERON:0004161,5.09e-22,22;UBERON:0008836,5.09e-22,22;UBERON:0004921,7.55e-21,114;UBERON:0002365,1.13e-18,25;UBERON:0002330,1.13e-18,25;UBERON:0000160,8.86e-18,31;UBERON:0003929,7.22e-15,55;UBERON:0000344,2.01e-14,15;UBERON:0005409,4.65e-14,47;UBERON:0005911,4.64e-13,69;UBERON:0001242,4.90e-12,13;UBERON:0001262,4.90e-12,13;UBERON:0004786,4.90e-12,13;UBERON:0000490,4.59e-11,66;UBERON:0005256,4.68e-10,45;UBERON:0003350,1.46e-09,9;UBERON:0004808,1.46e-09,9;UBERON:0001277,1.46e-09,9;UBERON:0003914,1.90e-08,47;UBERON:0005177,2.69e-08,79;UBERON:0005172,7.44e-08,49;UBERON:0005173,7.44e-08,49;UBERON:0002417,7.44e-08,49;UBERON:0000916,7.44e-08,49;UBERON:0004923,9.63e-08,24;UBERON:0000485,1.60e-07,11;UBERON:0011216,6.16e-07,194|phase1_expression=0,5.23463111459042,4.09499315450582,15.7281389879552,21.5385163876929,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,6.55968933452967,5.50582274561208,1.14846392823004,3.87685796543167,5.38678081714723,4.3705386474966,5.04060259519861,0.221730510655305,0,0,0,7.22129049378186,5.81821258754723,4.90006455029686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0.45839474333043,0,0,0,0,0,2.6087803983151,12.0459342777394,14.9593693415705,17.810205324048,40.2861378817555,34.9460971935922,5.05599912474307,0,0,0,0,1.28326477414318,0,0,0,0,0,5.93756174539112,0,0.742210695324124,0,0.608930956624282,0,0.150722640552623,0.352766121407114,0.628332956648377,0,11.1341504828332,0,0,0,0,1.86391761218122,0.292780797011547,0,8.68553987709211,0,0,0,0.149790639404823,0,0,0.347648640384553,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.648550476366846,0.292399974850665,0.658650345873152,0.671032093801859,0,0,50.8844925795049,8.99131926656051,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,12.3377556001573,0.823494773620054,1.00534083520108,3.58121649674071,1.16978452271472,12.5834717211591,7.13255564586491,15.5330193138406,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.740382983530803,36.1672205046322,0.166845105716094,0.393117990226406,0.224862112384854,1.62288097110802,3.61765739628625,3.56476192493988,3.45235364940973,4.86405680325106,4.94210543738547,20.1275489138296,15.6299198020771,17.4741096944154,12.8815227753027,19.5543180738884,18.332853811808,3.32555742299888,0,0,0,0,0,0,0,0,0.221464689648775,0.318909537314974,1.63863314715738,1.55416483679306,0.867894351489069,0,0,0.983528546038072,0.551873492609465,0,0,0,2.01976741763498,0,0,0,0,0,0.283076530788832,0,0,0,0,0.851640511249612,0,0,0.494910368917606,5.30980553359851,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0.775284879504663,1.81766864738753,0.712994756769443,1.8962205476149,1.05418608574999,7.21948802737308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| ||
|EntrezGene=319660 | |||
|HGNC= | |||
|MCL_coexpression_id=265 | |||
|UniProt=E0CYN0 | |||
|association_with_transcript=0bp_to_ENSMUST00000160768_5end | |||
|description=CAGE_peak_2_at_Agmo_5end | |||
|id=chr12:37968316..37968345,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.16e-07!25;CL:0002563!5.89e-07!9;CL:0002251!5.89e-07!9;CL:0000223!8.25e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.05e-13,25;CL:0000223,6.01e-12,20;CL:0002563,1.46e-09,9;CL:0002251,1.46e-09,9;CL:0000182,1.61e-08,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!5.89e-16!128;UBERON:0001555!5.89e-16!128;UBERON:0007026!5.89e-16!128;UBERON:0000160!9.80e-16!43;UBERON:0009854!2.37e-15!23;UBERON:0009856!2.37e-15!23;UBERON:0004119!2.92e-15!130;UBERON:0000925!2.92e-15!130;UBERON:0006595!2.92e-15!130;UBERON:0002107!7.60e-15!22;UBERON:0007499!7.60e-15!22;UBERON:0006925!7.60e-15!22;UBERON:0009497!7.60e-15!22;UBERON:0000015!7.60e-15!22;UBERON:0002423!7.60e-15!22;UBERON:0006235!7.60e-15!22;UBERON:0008835!7.60e-15!22;UBERON:0003894!7.60e-15!22;UBERON:0004161!7.60e-15!22;UBERON:0008836!7.60e-15!22;UBERON:0004921!8.20e-15!126;UBERON:0004185!8.20e-15!126;UBERON:0002365!1.90e-14!25;UBERON:0002330!1.90e-14!25;UBERON:0005409!1.17e-11!59;UBERON:0000344!3.08e-10!15;UBERON:0001242!6.67e-09!13;UBERON:0000060!6.67e-09!13;UBERON:0001262!6.67e-09!13;UBERON:0004786!6.67e-09!13;UBERON:0003929!2.60e-08!55;UBERON:0005256!5.44e-08!47;UBERON:0005911!2.15e-07!69;UBERON:0003350!5.89e-07!9;UBERON:0004808!5.89e-07!9;UBERON:0001277!5.89e-07!9;UBERON:0005172!8.70e-07!49;UBERON:0005173!8.70e-07!49;UBERON:0002417!8.70e-07!49;UBERON:0000916!8.70e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,5.90e-23,23;UBERON:0009856,5.90e-23,23;UBERON:0001007,9.02e-23,116;UBERON:0001555,9.02e-23,116;UBERON:0007026,9.02e-23,116;UBERON:0004119,3.75e-22,118;UBERON:0000925,3.75e-22,118;UBERON:0006595,3.75e-22,118;UBERON:0002107,5.09e-22,22;UBERON:0007499,5.09e-22,22;UBERON:0006925,5.09e-22,22;UBERON:0009497,5.09e-22,22;UBERON:0000015,5.09e-22,22;UBERON:0002423,5.09e-22,22;UBERON:0006235,5.09e-22,22;UBERON:0008835,5.09e-22,22;UBERON:0003894,5.09e-22,22;UBERON:0004161,5.09e-22,22;UBERON:0008836,5.09e-22,22;UBERON:0004921,7.55e-21,114;UBERON:0002365,1.13e-18,25;UBERON:0002330,1.13e-18,25;UBERON:0000160,8.86e-18,31;UBERON:0003929,7.22e-15,55;UBERON:0000344,2.01e-14,15;UBERON:0005409,4.65e-14,47;UBERON:0005911,4.64e-13,69;UBERON:0001242,4.90e-12,13;UBERON:0001262,4.90e-12,13;UBERON:0004786,4.90e-12,13;UBERON:0000490,4.59e-11,66;UBERON:0005256,4.68e-10,45;UBERON:0003350,1.46e-09,9;UBERON:0004808,1.46e-09,9;UBERON:0001277,1.46e-09,9;UBERON:0003914,1.90e-08,47;UBERON:0005177,2.69e-08,79;UBERON:0005172,7.44e-08,49;UBERON:0005173,7.44e-08,49;UBERON:0002417,7.44e-08,49;UBERON:0000916,7.44e-08,49;UBERON:0004923,9.63e-08,24;UBERON:0000485,1.60e-07,11;UBERON:0011216,6.16e-07,194 | |||
|phase1_expression=0,5.23463111459042,4.09499315450582,15.7281389879552,21.5385163876929,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,6.55968933452967,5.50582274561208,1.14846392823004,3.87685796543167,5.38678081714723,4.3705386474966,5.04060259519861,0.221730510655305,0,0,0,7.22129049378186,5.81821258754723,4.90006455029686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0.45839474333043,0,0,0,0,0,2.6087803983151,12.0459342777394,14.9593693415705,17.810205324048,40.2861378817555,34.9460971935922,5.05599912474307,0,0,0,0,1.28326477414318,0,0,0,0,0,5.93756174539112,0,0.742210695324124,0,0.608930956624282,0,0.150722640552623,0.352766121407114,0.628332956648377,0,11.1341504828332,0,0,0,0,1.86391761218122,0.292780797011547,0,8.68553987709211,0,0,0,0.149790639404823,0,0,0.347648640384553,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.648550476366846,0.292399974850665,0.658650345873152,0.671032093801859,0,0,50.8844925795049,8.99131926656051,0,0,0.128867461322093,0,0.22237804384487,0.190225626112559,12.3377556001573,0.823494773620054,1.00534083520108,3.58121649674071,1.16978452271472,12.5834717211591,7.13255564586491,15.5330193138406,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.740382983530803,36.1672205046322,0.166845105716094,0.393117990226406,0.224862112384854,1.62288097110802,3.61765739628625,3.56476192493988,3.45235364940973,4.86405680325106,4.94210543738547,20.1275489138296,15.6299198020771,17.4741096944154,12.8815227753027,19.5543180738884,18.332853811808,3.32555742299888,0,0,0,0,0,0,0,0,0.221464689648775,0.318909537314974,1.63863314715738,1.55416483679306,0.867894351489069,0,0,0.983528546038072,0.551873492609465,0,0,0,2.01976741763498,0,0,0,0,0,0.283076530788832,0,0,0,0,0.851640511249612,0,0,0.494910368917606,5.30980553359851,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0.775284879504663,1.81766864738753,0.712994756769443,1.8962205476149,1.05418608574999,7.21948802737308,0.340439605753788,0,0,0,0,0,0,0,0,0,0.882113592219848,0.32977250588296,0.645857706783622,0,0.596861720015682,0.492422699235184,6.41257840585672,0.18542530201051,0,0,0,0,0,0,0,0.139951452323658,0,1.90934123603023,0,0,0,0,0,1.21377911746339,3.63675205191478,1.30877970992015,0.518459893167171,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.201652370273681,0,0,0.116876902181569,0.453460767230423,0,0,0,2.31827512838629,0,0,0.214368379079066,7.02200945649509,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.367687016900028,0.222246727801615,0.824140228955577,0,0.252697211763798,0.760437899670719,0,0.280924522409647,0.256100609619477,0.459483751644906,0.476293691283074,0.579421629724277,0.192909220463705,0,0.441596760403192,0.342869252385415,0.532427418478012,0.238436189947321,0.436039249896986,0.188218760830661,0.338458431566706,0,0.263069711437843,0.407412341537585,0,0.355905054372522,0.394017929502254,0,0.309873682371932,0.192906610981141,0,0.467863216890817,0.429742108096597,0.956441660344217,0.441182838239031,0.463735671240843 | |||
|short_description=p2@Agmo | |||
}} |
Revision as of 22:47, 12 September 2013
Short description: | p2@Agmo |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Agmo_5end |
Coexpression cluster: | MCL_coexpression_mm9:265 |
Association with transcript: | 0bp_to_ENSMUST00000160768_5end |
EntrezGene: | Agmo |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.05e-13 | 25 |
endodermal cell | 6.01e-12 | 20 |
intestinal epithelial cell | 1.46e-09 | 9 |
epithelial cell of alimentary canal | 1.46e-09 | 9 |
hepatocyte | 1.61e-08 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.