FFCP PHASE1:Mm9::chr2:110571873..110571881,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=157|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:110571873..110571881,+|id=chr2:110571873..110571881,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001911!1.78e-26!2;UBERON:0000076!1.78e-26!2;UBERON:0005333!1.78e-26!2;UBERON:0008425!1.78e-26!2;UBERON:0005311!1.78e-26!2;UBERON:0001301!1.08e-17!3;UBERON:0006555!1.08e-17!3;UBERON:0005103!1.08e-17!3;UBERON:0000083!1.08e-17!3;UBERON:0009201!1.08e-17!3;UBERON:0004819!1.08e-17!3;UBERON:0006553!1.08e-17!3;UBERON:0003074!1.08e-17!3;UBERON:0003060!1.08e-17!3;UBERON:0000080!1.56e-13!4;UBERON:0005904!1.56e-13!4;UBERON:0006947!1.56e-13!4;UBERON:0002120!1.56e-13!4;UBERON:0004054!1.56e-13!4;UBERON:0004875!1.56e-13!4;UBERON:0004876!1.56e-13!4;UBERON:0005721!1.56e-13!4;UBERON:0005754!1.56e-13!4;UBERON:0007297!1.56e-13!4;UBERON:0000058!2.37e-09!6;UBERON:0001343!1.52e-07!2;UBERON:0004910!1.52e-07!2;UBERON:0004909!1.52e-07!2;UBERON:0005154!1.52e-07!2;UBERON:0005295!1.52e-07!2;UBERON:0005297!1.52e-07!2;UBERON:0005294!1.52e-07!2;UBERON:0010141!1.52e-07!2;UBERON:0005891!1.52e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.68e-58,2;UBERON:0000076,1.68e-58,2;UBERON:0005333,1.68e-58,2;UBERON:0008425,1.68e-58,2;UBERON:0005311,1.68e-58,2;UBERON:0003100,1.07e-11,11;UBERON:0001301,7.15e-11,3;UBERON:0006555,7.15e-11,3;UBERON:0005103,7.15e-11,3;UBERON:0000083,7.15e-11,3;UBERON:0009201,7.15e-11,3;UBERON:0004819,7.15e-11,3;UBERON:0006553,7.15e-11,3;UBERON:0003074,7.15e-11,3;UBERON:0003060,7.15e-11,3;UBERON:0005085,4.49e-10,13;UBERON:0000080,1.73e-08,4;UBERON:0005904,1.73e-08,4;UBERON:0006947,1.73e-08,4;UBERON:0002120,1.73e-08,4;UBERON:0004054,1.73e-08,4;UBERON:0004875,1.73e-08,4;UBERON:0004876,1.73e-08,4;UBERON:0005721,1.73e-08,4;UBERON:0005754,1.73e-08,4;UBERON:0007297,1.73e-08,4;UBERON:0005153,5.82e-08,17;UBERON:0005157,6.34e-07,20|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,2.27450482590307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4094070032094,6.62248191131358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:110571873..110571881,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=157 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:110571873..110571881,+ | |||
|id=chr2:110571873..110571881,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001911!1.78e-26!2;UBERON:0000076!1.78e-26!2;UBERON:0005333!1.78e-26!2;UBERON:0008425!1.78e-26!2;UBERON:0005311!1.78e-26!2;UBERON:0001301!1.08e-17!3;UBERON:0006555!1.08e-17!3;UBERON:0005103!1.08e-17!3;UBERON:0000083!1.08e-17!3;UBERON:0009201!1.08e-17!3;UBERON:0004819!1.08e-17!3;UBERON:0006553!1.08e-17!3;UBERON:0003074!1.08e-17!3;UBERON:0003060!1.08e-17!3;UBERON:0000080!1.56e-13!4;UBERON:0005904!1.56e-13!4;UBERON:0006947!1.56e-13!4;UBERON:0002120!1.56e-13!4;UBERON:0004054!1.56e-13!4;UBERON:0004875!1.56e-13!4;UBERON:0004876!1.56e-13!4;UBERON:0005721!1.56e-13!4;UBERON:0005754!1.56e-13!4;UBERON:0007297!1.56e-13!4;UBERON:0000058!2.37e-09!6;UBERON:0001343!1.52e-07!2;UBERON:0004910!1.52e-07!2;UBERON:0004909!1.52e-07!2;UBERON:0005154!1.52e-07!2;UBERON:0005295!1.52e-07!2;UBERON:0005297!1.52e-07!2;UBERON:0005294!1.52e-07!2;UBERON:0010141!1.52e-07!2;UBERON:0005891!1.52e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.68e-58,2;UBERON:0000076,1.68e-58,2;UBERON:0005333,1.68e-58,2;UBERON:0008425,1.68e-58,2;UBERON:0005311,1.68e-58,2;UBERON:0003100,1.07e-11,11;UBERON:0001301,7.15e-11,3;UBERON:0006555,7.15e-11,3;UBERON:0005103,7.15e-11,3;UBERON:0000083,7.15e-11,3;UBERON:0009201,7.15e-11,3;UBERON:0004819,7.15e-11,3;UBERON:0006553,7.15e-11,3;UBERON:0003074,7.15e-11,3;UBERON:0003060,7.15e-11,3;UBERON:0005085,4.49e-10,13;UBERON:0000080,1.73e-08,4;UBERON:0005904,1.73e-08,4;UBERON:0006947,1.73e-08,4;UBERON:0002120,1.73e-08,4;UBERON:0004054,1.73e-08,4;UBERON:0004875,1.73e-08,4;UBERON:0004876,1.73e-08,4;UBERON:0005721,1.73e-08,4;UBERON:0005754,1.73e-08,4;UBERON:0007297,1.73e-08,4;UBERON:0005153,5.82e-08,17;UBERON:0005157,6.34e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,2.27450482590307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4094070032094,6.62248191131358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:110571873..110571881,+ | |||
}} |
Revision as of 21:35, 13 September 2013
Short description: | p@chr2:110571873..110571881, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:110571873..110571881, + |
Coexpression cluster: | MCL_coexpression_mm9:157 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland | 1.68e-58 | 2 |
external ectoderm | 1.68e-58 | 2 |
mammary bud | 1.68e-58 | 2 |
mammary ridge | 1.68e-58 | 2 |
mammary placode | 1.68e-58 | 2 |
female organism | 1.07e-11 | 11 |
epididymis | 7.15e-11 | 3 |
excretory tube | 7.15e-11 | 3 |
mesonephric epithelium | 7.15e-11 | 3 |
mesonephric tubule | 7.15e-11 | 3 |
nephric duct | 7.15e-11 | 3 |
kidney epithelium | 7.15e-11 | 3 |
renal duct | 7.15e-11 | 3 |
mesonephric duct | 7.15e-11 | 3 |
pronephric duct | 7.15e-11 | 3 |
ectodermal placode | 4.49e-10 | 13 |
mesonephros | 1.73e-08 | 4 |
duct of male reproductive system | 1.73e-08 | 4 |
male genital duct | 1.73e-08 | 4 |
pronephros | 1.73e-08 | 4 |
internal male genitalia | 1.73e-08 | 4 |
nephrogenic cord | 1.73e-08 | 4 |
urogenital ridge | 1.73e-08 | 4 |
pronephric mesoderm | 1.73e-08 | 4 |
rostral part of nephrogenic cord | 1.73e-08 | 4 |
presumptive pronephric mesoderm | 1.73e-08 | 4 |
epithelial bud | 5.82e-08 | 17 |
epithelial fold | 6.34e-07 | 20 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.