FFCP PHASE1:Mm9::chr3:107734575..107734660,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=68312|HGNC=|MCL_coexpression_id=9|UniProt=D3YVP6|association_with_transcript=0bp_to_ENSMUST00000106687_5end|description=CAGE_peak_1_at_Gstm7_5end|id=chr3:107734575..107734660,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!2.46e-09!18;UBERON:0005564!2.46e-09!18;UBERON:0000025!4.36e-09!114;UBERON:0003135!5.35e-09!15;UBERON:0004176!6.07e-09!17;UBERON:0009196!6.07e-09!17;UBERON:0009117!6.07e-09!17;UBERON:0000466!9.38e-09!79;UBERON:0003886!1.11e-08!38;UBERON:0002107!1.95e-08!22;UBERON:0007499!1.95e-08!22;UBERON:0006925!1.95e-08!22;UBERON:0009497!1.95e-08!22;UBERON:0000015!1.95e-08!22;UBERON:0002423!1.95e-08!22;UBERON:0006235!1.95e-08!22;UBERON:0008835!1.95e-08!22;UBERON:0003894!1.95e-08!22;UBERON:0004161!1.95e-08!22;UBERON:0008836!1.95e-08!22;UBERON:0002346!2.57e-08!71;UBERON:0003075!2.57e-08!71;UBERON:0007284!2.57e-08!71;UBERON:0000473!2.63e-08!14;UBERON:0003101!2.66e-08!16;UBERON:0000079!2.66e-08!16;UBERON:0002553!3.85e-08!39;UBERON:0004111!4.08e-08!122;UBERON:0002323!4.09e-08!37;UBERON:0004458!4.09e-08!37;UBERON:0009854!7.76e-08!23;UBERON:0009856!7.76e-08!23;UBERON:0003914!8.72e-08!47;UBERON:0002365!1.99e-07!25;UBERON:0002330!1.99e-07!25;UBERON:0000922!2.28e-07!328;UBERON:0005156!3.36e-07!26;UBERON:0000990!3.36e-07!26;UBERON:0003133!5.24e-07!24;UBERON:0000033!6.73e-07!63;UBERON:0000468!7.27e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0000991,2.34e-09,18;UBERON:0005564,2.34e-09,18;UBERON:0010314,2.74e-09,92;UBERON:0000025,4.16e-09,114;UBERON:0003135,5.10e-09,15;UBERON:0004176,5.79e-09,17;UBERON:0009196,5.79e-09,17;UBERON:0009117,5.79e-09,17;UBERON:0003886,1.81e-08,38;UBERON:0002107,1.86e-08,22;UBERON:0007499,1.86e-08,22;UBERON:0006925,1.86e-08,22;UBERON:0009497,1.86e-08,22;UBERON:0000015,1.86e-08,22;UBERON:0002423,1.86e-08,22;UBERON:0006235,1.86e-08,22;UBERON:0008835,1.86e-08,22;UBERON:0003894,1.86e-08,22;UBERON:0004161,1.86e-08,22;UBERON:0008836,1.86e-08,22;UBERON:0000473,2.52e-08,14;UBERON:0003101,2.54e-08,16;UBERON:0000079,2.54e-08,16;UBERON:0004111,3.91e-08,122;UBERON:0002553,6.17e-08,39;UBERON:0002323,6.62e-08,37;UBERON:0004458,6.62e-08,37;UBERON:0009854,7.45e-08,23;UBERON:0009856,7.45e-08,23;UBERON:0003914,8.37e-08,47;UBERON:0002365,1.92e-07,25;UBERON:0002330,1.92e-07,25;UBERON:0005156,4.28e-07,26;UBERON:0000990,4.28e-07,26;UBERON:0003133,6.72e-07,24|phase1_expression=48.3649518256478,17.7977457896074,16.8349718574128,23.8946726932396,24.0429950374247,8.56184286750638,7.00837921786577,0.129123323441576,0.140788722151667,0,0,0,0.171200729931206,0,0,0,0,0,0,0,55.7883983391018,0,0,29.7585906395736,19.4997888907094,18.3754228516806,17.6612418425221,18.3150547783006,6.08074942260396,7.81293402255785,3.76941868114018,0,0.61506478758457,0,8.37669697278696,11.802659820453,9.18762103180661,0,0,0,0,0,0,3.65100772129174,4.35920804243913,3.12029478674859,22.6893489860931,80.0152323916239,84.3594941700372,50.5517737593137,26.1774608439428,50.3133975277401,0,0,0,15.6928255981928,12.8940047972441,10.8291139378263,41.2725580153579,48.138179113755,27.8885817542719,7.45457970552091,7.11435836888911,0.899899717281399,0,0,8.68840320503374,18.8266969607562,17.4198548678242,18.9008313664367,20.4015212510841,14.568200204594,16.1234034894678,52.5485528632153,62.9704744589813,36.7687514644008,38.540558349786,36.6462660304489,48.6932710422292,45.7645418423773,48.3969634656747,34.3802824567462,56.394965798279,31.5147061617741,39.8803426697474,11.490514833473,11.6744778255264,24.9775257405903,0.37863096666592,1.66257432234928,7.8263411949453,83.4611160671945,88.3962733820076,163.530067066259,144.90014109083,94.9817000646351,72.7502096282475,0.852151612890289,0.779358013808606,0.35333957451034,31.6897694497531,1.28326477414318,0,0,1.29894624606728,1.52015919285059,2.52762222507392,84.3818871123853,2.07150306917737,76.8930280355792,23.5940044401945,73.0717147949139,68.2621871877933,71.7439769030483,74.904006445444,78.2902863983878,0,20.8223073964673,1.76922110389975,1.94120219936891,2.42925670306433,2.42437626567611,7.45567044872489,23.1296829639122,18.431310199584,31.1657607354481,1.7972268675888,1.19980546198682,1.39777249780371,63.6610217470497,53.5275705297793,26.6387226479273,22.2495129846114,14.0643501531682,71.6868753730482,41.2092808192104,122.614594075781,301.064868876425,1636.37986085804,14.7309299120532,33.5710742843776,34.4853156650209,45.0155324513373,35.1142225557216,41.50226448231,39.8433670085883,28.1105173679186,19.4027528054262,24.1436152084783,18.3432897762785,17.9470146647228,10.302199424096,9.17555922444473,2.43776516565517,1.85203922767149,57.5209031105445,2.1066395619397,0.772043721344145,1.98914449576915,14.2916783049496,14.540615718828,12.604344302271,14.4414288706978,16.7249596985293,20.9803273526834,24.1835302540424,23.0715125203672,30.1254583307297,18.9243827400503,12.148392341853,39.7237166774693,46.9301959635317,51.813827208688,55.2930445292732,36.380161101594,20.992540925374,136.793376155292,40.7253872661858,17.0630600428187,11.3795969211615,14.0465532841082,32.6727309889815,28.2420115682985,27.5827157863211,27.0481565080372,20.7520682952254,14.5774421104156,15.5186048192098,11.6978452271472,26.9645822596266,31.123879181956,40.6248197438909,11.3800740571849,9.25412952138803,10.1436962105772,8.96065842519383,8.33995694820791,8.83711330618014,6.0707075639287,19.6321496812871,20.095837163696,19.4967518996445,106.130040497199,10.3443965543978,17.6903095601883,17.7641068784034,36.311961728542,80.5531713573072,113.817755746295,110.763012918562,48.6405680325106,71.1114060157131,46.0058260887535,106.80445198086,111.085411628784,156.093746571315,184.241143687004,164.030797263545,8.86815312799702,9.85355341206521,7.65935389277522,3.90413697282933,4.92849521405854,5.19269398069629,8.33152743101048,3.51240566144038,4.41378403497335,7.75126413770712,6.218735977642,5.73521601505083,12.7786886580763,7.08780387049407,0,0,40.324670387561,8.27810238914197,104.839535262028,77.1252897776697,0.491804836130026,5.30188947129183,15.7754109708128,16.0079885161622,19.6035291936847,10.0366895140072,7.79795359288379,7.07691326972081,19.4309136803949,14.9050487534769,11.4633455604492,24.4204200480573,51.3823108453932,40.0647608251324,32.4145049113616,310.473771434312,59.7353122529833,29.1336763385978,52.6042989118667,174.27109369445,190.469720908098,145.416824977478,37.2136742162238,44.3511149962557,52.405114622554,57.5186899443185,41.1132573442495,41.2542172992747,14.9793426531667,21.0671480016633,35.9617140916057,25.2917701337279,18.2660440651542,22.1177333826567,21.0622746370715,37.4491887410957,0.469343416127421,0.63549621259146,10.1443063105282,2.80306630000516,1.77610869365496,1.93001359770099,2.38744688006273,1.80554989719567,13.4081184849731,144.817160870208,0.512612642393558,9.49379592630823,2.77791791054568,0.376736914009382,0.546776910884101,0.686334519619568,6.96911562974807,6.01791244991729,3.45499934511059,47.7335309007557,15.8167996790568,20.7385856469386,16.5248171457356,15.0543573130417,20.3077184283945,10.1148259788616,15.7868100435392,21.9874991266585,16.3314866347659,3.10669656543463,189.400827397888,194.969576041348,142.128843302647,97.0311429836798,119.472836716901,137.361330024003,152.799124716772,216.790300765177,268.649640418671,155.821757932774,168.497553660851,0.316011120628178,6.28448167399509,1.64337531463724,1.03936658382236,2.14832034800978,1.19208812868759,0.360586348559907,0.738447635872886,0.706765149637033,0.15241361331,0.504130925684203,0.682205165178267,0.481059208201647,0.350630706544707,11.1097887971454,0.887943813496259,0.717710852875806,1.34307693091263,2.31827512838629,4.50437941082837,192.675508729163,2.57242054894879,4.51414893631827,6.7770221114048,4.14292712856459,11.4579102687879,3.78077001156113,6.16574267793578,9.82012066606611,6.07520250208625,9.90706647093285,11.3285602246051,5.69536342927002,22.8332164685189,30.3258903784784,23.9027048055788,17.0174701947806,23.89590053959,20.4066294379516,18.4464784075341,18.9552252659783,19.5760717851007,15.9199243411192,14.7017993936339,16.0332390178165,14.8889996877113,15.686162339193,15.5075766180156,12.859929664643,14.6014250690518,16.2043745189512,11.5384052224926,16.3390801349181,19.2006781335833,15.0854435235437,13.35242663705,15.6974129962915,16.6573603335135,15.1460148126101,16.8293735042951,16.3103221091463,17.5187306861162,18.5176949647054,15.0666473017701,14.5786633915834,14.7323175541088,15.3387472774106,17.1686883773216,15.2384452542147,20.5859815431959,13.7517474590911,4.20834330551455,2.8676884485537,2.78241402744506|short_description=p1@Gstm7}} | ||
|EntrezGene=68312 | |||
|HGNC= | |||
|MCL_coexpression_id=9 | |||
|UniProt=D3YVP6 | |||
|association_with_transcript=0bp_to_ENSMUST00000106687_5end | |||
|description=CAGE_peak_1_at_Gstm7_5end | |||
|id=chr3:107734575..107734660,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!2.46e-09!18;UBERON:0005564!2.46e-09!18;UBERON:0000025!4.36e-09!114;UBERON:0003135!5.35e-09!15;UBERON:0004176!6.07e-09!17;UBERON:0009196!6.07e-09!17;UBERON:0009117!6.07e-09!17;UBERON:0000466!9.38e-09!79;UBERON:0003886!1.11e-08!38;UBERON:0002107!1.95e-08!22;UBERON:0007499!1.95e-08!22;UBERON:0006925!1.95e-08!22;UBERON:0009497!1.95e-08!22;UBERON:0000015!1.95e-08!22;UBERON:0002423!1.95e-08!22;UBERON:0006235!1.95e-08!22;UBERON:0008835!1.95e-08!22;UBERON:0003894!1.95e-08!22;UBERON:0004161!1.95e-08!22;UBERON:0008836!1.95e-08!22;UBERON:0002346!2.57e-08!71;UBERON:0003075!2.57e-08!71;UBERON:0007284!2.57e-08!71;UBERON:0000473!2.63e-08!14;UBERON:0003101!2.66e-08!16;UBERON:0000079!2.66e-08!16;UBERON:0002553!3.85e-08!39;UBERON:0004111!4.08e-08!122;UBERON:0002323!4.09e-08!37;UBERON:0004458!4.09e-08!37;UBERON:0009854!7.76e-08!23;UBERON:0009856!7.76e-08!23;UBERON:0003914!8.72e-08!47;UBERON:0002365!1.99e-07!25;UBERON:0002330!1.99e-07!25;UBERON:0000922!2.28e-07!328;UBERON:0005156!3.36e-07!26;UBERON:0000990!3.36e-07!26;UBERON:0003133!5.24e-07!24;UBERON:0000033!6.73e-07!63;UBERON:0000468!7.27e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,2.34e-09,18;UBERON:0005564,2.34e-09,18;UBERON:0010314,2.74e-09,92;UBERON:0000025,4.16e-09,114;UBERON:0003135,5.10e-09,15;UBERON:0004176,5.79e-09,17;UBERON:0009196,5.79e-09,17;UBERON:0009117,5.79e-09,17;UBERON:0003886,1.81e-08,38;UBERON:0002107,1.86e-08,22;UBERON:0007499,1.86e-08,22;UBERON:0006925,1.86e-08,22;UBERON:0009497,1.86e-08,22;UBERON:0000015,1.86e-08,22;UBERON:0002423,1.86e-08,22;UBERON:0006235,1.86e-08,22;UBERON:0008835,1.86e-08,22;UBERON:0003894,1.86e-08,22;UBERON:0004161,1.86e-08,22;UBERON:0008836,1.86e-08,22;UBERON:0000473,2.52e-08,14;UBERON:0003101,2.54e-08,16;UBERON:0000079,2.54e-08,16;UBERON:0004111,3.91e-08,122;UBERON:0002553,6.17e-08,39;UBERON:0002323,6.62e-08,37;UBERON:0004458,6.62e-08,37;UBERON:0009854,7.45e-08,23;UBERON:0009856,7.45e-08,23;UBERON:0003914,8.37e-08,47;UBERON:0002365,1.92e-07,25;UBERON:0002330,1.92e-07,25;UBERON:0005156,4.28e-07,26;UBERON:0000990,4.28e-07,26;UBERON:0003133,6.72e-07,24 | |||
|phase1_expression=48.3649518256478,17.7977457896074,16.8349718574128,23.8946726932396,24.0429950374247,8.56184286750638,7.00837921786577,0.129123323441576,0.140788722151667,0,0,0,0.171200729931206,0,0,0,0,0,0,0,55.7883983391018,0,0,29.7585906395736,19.4997888907094,18.3754228516806,17.6612418425221,18.3150547783006,6.08074942260396,7.81293402255785,3.76941868114018,0,0.61506478758457,0,8.37669697278696,11.802659820453,9.18762103180661,0,0,0,0,0,0,3.65100772129174,4.35920804243913,3.12029478674859,22.6893489860931,80.0152323916239,84.3594941700372,50.5517737593137,26.1774608439428,50.3133975277401,0,0,0,15.6928255981928,12.8940047972441,10.8291139378263,41.2725580153579,48.138179113755,27.8885817542719,7.45457970552091,7.11435836888911,0.899899717281399,0,0,8.68840320503374,18.8266969607562,17.4198548678242,18.9008313664367,20.4015212510841,14.568200204594,16.1234034894678,52.5485528632153,62.9704744589813,36.7687514644008,38.540558349786,36.6462660304489,48.6932710422292,45.7645418423773,48.3969634656747,34.3802824567462,56.394965798279,31.5147061617741,39.8803426697474,11.490514833473,11.6744778255264,24.9775257405903,0.37863096666592,1.66257432234928,7.8263411949453,83.4611160671945,88.3962733820076,163.530067066259,144.90014109083,94.9817000646351,72.7502096282475,0.852151612890289,0.779358013808606,0.35333957451034,31.6897694497531,1.28326477414318,0,0,1.29894624606728,1.52015919285059,2.52762222507392,84.3818871123853,2.07150306917737,76.8930280355792,23.5940044401945,73.0717147949139,68.2621871877933,71.7439769030483,74.904006445444,78.2902863983878,0,20.8223073964673,1.76922110389975,1.94120219936891,2.42925670306433,2.42437626567611,7.45567044872489,23.1296829639122,18.431310199584,31.1657607354481,1.7972268675888,1.19980546198682,1.39777249780371,63.6610217470497,53.5275705297793,26.6387226479273,22.2495129846114,14.0643501531682,71.6868753730482,41.2092808192104,122.614594075781,301.064868876425,1636.37986085804,14.7309299120532,33.5710742843776,34.4853156650209,45.0155324513373,35.1142225557216,41.50226448231,39.8433670085883,28.1105173679186,19.4027528054262,24.1436152084783,18.3432897762785,17.9470146647228,10.302199424096,9.17555922444473,2.43776516565517,1.85203922767149,57.5209031105445,2.1066395619397,0.772043721344145,1.98914449576915,14.2916783049496,14.540615718828,12.604344302271,14.4414288706978,16.7249596985293,20.9803273526834,24.1835302540424,23.0715125203672,30.1254583307297,18.9243827400503,12.148392341853,39.7237166774693,46.9301959635317,51.813827208688,55.2930445292732,36.380161101594,20.992540925374,136.793376155292,40.7253872661858,17.0630600428187,11.3795969211615,14.0465532841082,32.6727309889815,28.2420115682985,27.5827157863211,27.0481565080372,20.7520682952254,14.5774421104156,15.5186048192098,11.6978452271472,26.9645822596266,31.123879181956,40.6248197438909,11.3800740571849,9.25412952138803,10.1436962105772,8.96065842519383,8.33995694820791,8.83711330618014,6.0707075639287,19.6321496812871,20.095837163696,19.4967518996445,106.130040497199,10.3443965543978,17.6903095601883,17.7641068784034,36.311961728542,80.5531713573072,113.817755746295,110.763012918562,48.6405680325106,71.1114060157131,46.0058260887535,106.80445198086,111.085411628784,156.093746571315,184.241143687004,164.030797263545,8.86815312799702,9.85355341206521,7.65935389277522,3.90413697282933,4.92849521405854,5.19269398069629,8.33152743101048,3.51240566144038,4.41378403497335,7.75126413770712,6.218735977642,5.73521601505083,12.7786886580763,7.08780387049407,0,0,40.324670387561,8.27810238914197,104.839535262028,77.1252897776697,0.491804836130026,5.30188947129183,15.7754109708128,16.0079885161622,19.6035291936847,10.0366895140072,7.79795359288379,7.07691326972081,19.4309136803949,14.9050487534769,11.4633455604492,24.4204200480573,51.3823108453932,40.0647608251324,32.4145049113616,310.473771434312,59.7353122529833,29.1336763385978,52.6042989118667,174.27109369445,190.469720908098,145.416824977478,37.2136742162238,44.3511149962557,52.405114622554,57.5186899443185,41.1132573442495,41.2542172992747,14.9793426531667,21.0671480016633,35.9617140916057,25.2917701337279,18.2660440651542,22.1177333826567,21.0622746370715,37.4491887410957,0.469343416127421,0.63549621259146,10.1443063105282,2.80306630000516,1.77610869365496,1.93001359770099,2.38744688006273,1.80554989719567,13.4081184849731,144.817160870208,0.512612642393558,9.49379592630823,2.77791791054568,0.376736914009382,0.546776910884101,0.686334519619568,6.96911562974807,6.01791244991729,3.45499934511059,47.7335309007557,15.8167996790568,20.7385856469386,16.5248171457356,15.0543573130417,20.3077184283945,10.1148259788616,15.7868100435392,21.9874991266585,16.3314866347659,3.10669656543463,189.400827397888,194.969576041348,142.128843302647,97.0311429836798,119.472836716901,137.361330024003,152.799124716772,216.790300765177,268.649640418671,155.821757932774,168.497553660851,0.316011120628178,6.28448167399509,1.64337531463724,1.03936658382236,2.14832034800978,1.19208812868759,0.360586348559907,0.738447635872886,0.706765149637033,0.15241361331,0.504130925684203,0.682205165178267,0.481059208201647,0.350630706544707,11.1097887971454,0.887943813496259,0.717710852875806,1.34307693091263,2.31827512838629,4.50437941082837,192.675508729163,2.57242054894879,4.51414893631827,6.7770221114048,4.14292712856459,11.4579102687879,3.78077001156113,6.16574267793578,9.82012066606611,6.07520250208625,9.90706647093285,11.3285602246051,5.69536342927002,22.8332164685189,30.3258903784784,23.9027048055788,17.0174701947806,23.89590053959,20.4066294379516,18.4464784075341,18.9552252659783,19.5760717851007,15.9199243411192,14.7017993936339,16.0332390178165,14.8889996877113,15.686162339193,15.5075766180156,12.859929664643,14.6014250690518,16.2043745189512,11.5384052224926,16.3390801349181,19.2006781335833,15.0854435235437,13.35242663705,15.6974129962915,16.6573603335135,15.1460148126101,16.8293735042951,16.3103221091463,17.5187306861162,18.5176949647054,15.0666473017701,14.5786633915834,14.7323175541088,15.3387472774106,17.1686883773216,15.2384452542147,20.5859815431959,13.7517474590911,4.20834330551455,2.8676884485537,2.78241402744506 | |||
|short_description=p1@Gstm7 | |||
}} | |||
Revision as of 01:12, 14 September 2013
| Short description: | p1@Gstm7 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Gstm7_5end |
| Coexpression cluster: | MCL_coexpression_mm9:9 |
| Association with transcript: | 0bp_to_ENSMUST00000106687_5end |
| EntrezGene: | Gstm7 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
