FFCP PHASE1:Mm9::chrX:54040222..54040226,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1152|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:54040222..54040226,+|id=chrX:54040222..54040226,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!2.46e-08!14;UBERON:0000117!2.46e-08!14;UBERON:0000171!2.46e-08!14;UBERON:0000170!2.46e-08!14;UBERON:0005597!2.46e-08!14;UBERON:0000118!2.46e-08!14|ontology_enrichment_uberon_v019_2=UBERON:0002048,9.97e-22,14;UBERON:0000117,9.97e-22,14;UBERON:0000171,9.97e-22,14;UBERON:0000170,9.97e-22,14;UBERON:0005597,9.97e-22,14;UBERON:0000118,9.97e-22,14;UBERON:0005153,1.18e-17,17;UBERON:0005178,1.18e-17,17;UBERON:0005181,1.18e-17,17;UBERON:0002224,1.18e-17,17;UBERON:0000915,1.18e-17,17;UBERON:0008947,1.18e-17,17;UBERON:0003258,1.18e-17,17;UBERON:0005157,8.43e-15,20;UBERON:0001041,1.37e-08,80;UBERON:0000065,4.42e-08,41;UBERON:0001004,7.53e-08,42|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0.380046838912748,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0,0,0.263772575460388,0,0.52091337055676,0,0,0.30559649555362,0,0,0.186399445825301,0.075726193333184,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0.289198713839823,0,0.485300549842228,0.220841518460394,0.969750506270444,0,0.585561594023094,0.209446706813455,0.510914110417183,0,0,0,0.299581278809645,0,0.125654352112864,0.173824320192276,0,0,0,0,0.124406970610093,0.505445516867349,0.210441855886474,0,0,0,0.60281927134286,0.816437989815934,0.12811372028485,0.0937017245597288,0.517406741478031,0,0.189106080167819,0,0,0,0.348252166522167,0.823128545631774,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0.771335564436891,0,0.536546802799238,0.583826711835847,0.658239399653922,0.656669856316381,0.324275238183423,0.146199987425332,0,0.268412837520744,0.210289948564127,0.102904612379284,0.330418782983798,0,0,0.232236671860439,0,0,0,0.760902504450237,0,0.329397909448022,0.502670417600539,0.596869416123452,0.19496408711912,0,1.08069024937347,0.398282546508734,0,0.228497025219458,0,0,0,0.210407459670956,0.126473074248515,0.442830443938806,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0.50925170356284,0,0.162135226775035,0.274561413188081,1.43768206527355,0,0.312037673114561,0,0.538192240565737,0,0.739012760666419,0,0.162964976442026,0.339490171550376,0.704070744865506,1.50755631697634,1.19021820443007,1.56106918286239,1.41871629695572,1.7717175171902,2.55127629851979,3.60499292374624,3.45369963731791,2.16973587872267,0,0,0,0,0,0,0.163934945376675,1.51482556322624,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0.178065603667255,0,1.15479086080775,1.32745138339963,0.242780636154981,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0,0.356737635204141,0,0,0.23467170806371,0,0,0.8244312647074,0.322928853391811,0.361877549568935,0.358117032009409,0.328281799490123,0,0.18542530201051,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0,0,2.86401185404534,0,0,0.216010681643603,0.209088296014469,0.655087691238533,2.42755823492677,2.14898984885873,3.14107130380836,0.648074866458964,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0.419437377702843,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,1.58711268530648,0,0,0,0.579568782096571,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.888986911206461,0.618105171716683,0.962757628775446,0,0.760437899670719,0.565879024158229,0.37456602987953,0.384150914429216,0.402048282689293,1.42888107384922,0.695305955669133,0.192909220463705,0.824171801606613,1.03039244094078,0.685738504770831,0.532427418478012,0,1.88950341622027,0.658765662907314,0.592302255241736,0.548783918618318,1.8414879800649,0.814824683075171,0.561142271657738,0.474540072496697,0.788035859004508,0,0.464810523557898,0.578719832943424,0,0,0.644613162144895,0.956441660344217,0.220591419119515,0.463735671240843|short_description=p@chrX:54040222..54040226,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1152 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:54040222..54040226,+ | |||
|id=chrX:54040222..54040226,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!2.46e-08!14;UBERON:0000117!2.46e-08!14;UBERON:0000171!2.46e-08!14;UBERON:0000170!2.46e-08!14;UBERON:0005597!2.46e-08!14;UBERON:0000118!2.46e-08!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,9.97e-22,14;UBERON:0000117,9.97e-22,14;UBERON:0000171,9.97e-22,14;UBERON:0000170,9.97e-22,14;UBERON:0005597,9.97e-22,14;UBERON:0000118,9.97e-22,14;UBERON:0005153,1.18e-17,17;UBERON:0005178,1.18e-17,17;UBERON:0005181,1.18e-17,17;UBERON:0002224,1.18e-17,17;UBERON:0000915,1.18e-17,17;UBERON:0008947,1.18e-17,17;UBERON:0003258,1.18e-17,17;UBERON:0005157,8.43e-15,20;UBERON:0001041,1.37e-08,80;UBERON:0000065,4.42e-08,41;UBERON:0001004,7.53e-08,42 | |||
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0.380046838912748,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0,0,0.263772575460388,0,0.52091337055676,0,0,0.30559649555362,0,0,0.186399445825301,0.075726193333184,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0.289198713839823,0,0.485300549842228,0.220841518460394,0.969750506270444,0,0.585561594023094,0.209446706813455,0.510914110417183,0,0,0,0.299581278809645,0,0.125654352112864,0.173824320192276,0,0,0,0,0.124406970610093,0.505445516867349,0.210441855886474,0,0,0,0.60281927134286,0.816437989815934,0.12811372028485,0.0937017245597288,0.517406741478031,0,0.189106080167819,0,0,0,0.348252166522167,0.823128545631774,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0.771335564436891,0,0.536546802799238,0.583826711835847,0.658239399653922,0.656669856316381,0.324275238183423,0.146199987425332,0,0.268412837520744,0.210289948564127,0.102904612379284,0.330418782983798,0,0,0.232236671860439,0,0,0,0.760902504450237,0,0.329397909448022,0.502670417600539,0.596869416123452,0.19496408711912,0,1.08069024937347,0.398282546508734,0,0.228497025219458,0,0,0,0.210407459670956,0.126473074248515,0.442830443938806,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0.50925170356284,0,0.162135226775035,0.274561413188081,1.43768206527355,0,0.312037673114561,0,0.538192240565737,0,0.739012760666419,0,0.162964976442026,0.339490171550376,0.704070744865506,1.50755631697634,1.19021820443007,1.56106918286239,1.41871629695572,1.7717175171902,2.55127629851979,3.60499292374624,3.45369963731791,2.16973587872267,0,0,0,0,0,0,0.163934945376675,1.51482556322624,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0.178065603667255,0,1.15479086080775,1.32745138339963,0.242780636154981,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0,0.356737635204141,0,0,0.23467170806371,0,0,0.8244312647074,0.322928853391811,0.361877549568935,0.358117032009409,0.328281799490123,0,0.18542530201051,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0,0,2.86401185404534,0,0,0.216010681643603,0.209088296014469,0.655087691238533,2.42755823492677,2.14898984885873,3.14107130380836,0.648074866458964,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0.419437377702843,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,1.58711268530648,0,0,0,0.579568782096571,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.888986911206461,0.618105171716683,0.962757628775446,0,0.760437899670719,0.565879024158229,0.37456602987953,0.384150914429216,0.402048282689293,1.42888107384922,0.695305955669133,0.192909220463705,0.824171801606613,1.03039244094078,0.685738504770831,0.532427418478012,0,1.88950341622027,0.658765662907314,0.592302255241736,0.548783918618318,1.8414879800649,0.814824683075171,0.561142271657738,0.474540072496697,0.788035859004508,0,0.464810523557898,0.578719832943424,0,0,0.644613162144895,0.956441660344217,0.220591419119515,0.463735671240843 | |||
|short_description=p@chrX:54040222..54040226,+ | |||
}} |
Revision as of 19:54, 14 September 2013
Short description: | p@chrX:54040222..54040226, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:54040222..54040226, + |
Coexpression cluster: | MCL_coexpression_mm9:1152 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 9.97e-22 | 14 |
respiratory tube | 9.97e-22 | 14 |
respiration organ | 9.97e-22 | 14 |
pair of lungs | 9.97e-22 | 14 |
lung primordium | 9.97e-22 | 14 |
lung bud | 9.97e-22 | 14 |
epithelial bud | 1.18e-17 | 17 |
thoracic cavity element | 1.18e-17 | 17 |
thoracic segment organ | 1.18e-17 | 17 |
thoracic cavity | 1.18e-17 | 17 |
thoracic segment of trunk | 1.18e-17 | 17 |
respiratory primordium | 1.18e-17 | 17 |
endoderm of foregut | 1.18e-17 | 17 |
epithelial fold | 8.43e-15 | 20 |
foregut | 1.37e-08 | 80 |
respiratory tract | 4.42e-08 | 41 |
respiratory system | 7.53e-08 | 42 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.