FFCP PHASE1:Mm9::chr2:79095076..79095083,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16401|HGNC=|MCL_coexpression_id=1148|UniProt=E9QK91,Q00651,Q792F9,Q8BQ25|association_with_transcript=-499bp_to_ENSMUST00000028395,ENSMUST00000155105,NM_010576,uc008kgo.1,uc008kgp.1,uc008kgq.1,uc008kgr.1_5end|description=CAGE_peak_12_at_Itga4_5end|id=chr2:79095076..79095083,+|ontology_enrichment_celltype=CL:0000838!1.19e-15!12;CL:0000084!2.46e-14!11;CL:0000827!2.46e-14!11;CL:0000988!2.59e-14!32;CL:0002032!2.59e-14!32;CL:0000037!2.59e-14!32;CL:0000566!2.59e-14!32;CL:0000837!2.59e-14!32;CL:0000542!3.58e-14!13;CL:0000051!3.58e-14!13;CL:0000791!1.21e-11!9;CL:0000789!1.21e-11!9;CL:0002420!1.21e-11!9;CL:0002419!1.21e-11!9;CL:0000790!1.21e-11!9;CL:0002031!9.72e-11!25;CL:0000624!1.28e-10!8;CL:0000738!5.06e-10!17;CL:0002087!5.06e-10!17;CL:0000893!3.95e-08!6;CL:0002489!3.95e-08!6;CL:0000898!3.95e-08!6;CL:0000809!3.95e-08!6;CL:0000810!3.95e-08!6;CL:0000895!3.95e-08!6;CL:0000808!3.95e-08!6;CL:0000894!3.95e-08!6;CL:0000806!3.95e-08!6;CL:0000807!3.95e-08!6;CL:0000805!3.95e-08!6;CL:0002425!3.95e-08!6;CL:0002436!3.95e-08!6;CL:0002427!3.95e-08!6;CL:0002428!3.95e-08!6;CL:0002429!3.95e-08!6;CL:0002433!3.95e-08!6;CL:0002431!3.95e-08!6;CL:0002432!3.95e-08!6;CL:0002320!4.23e-08!46;CL:0000134!4.23e-08!46|ontology_enrichment_celltype_v019_2=CL:0000838,1.46e-20,12;CL:0000542,6.75e-19,13;CL:0000051,6.75e-19,13;CL:0000084,2.08e-17,11;CL:0000827,2.08e-17,11;CL:0000738,3.45e-14,17;CL:0002087,3.45e-14,17;CL:0000624,1.00e-12,8;CL:0000791,2.76e-11,9;CL:0000789,2.76e-11,9;CL:0002420,2.76e-11,9;CL:0002419,2.76e-11,9;CL:0000790,2.76e-11,9;CL:0000893,4.70e-11,6;CL:0002489,4.70e-11,6;CL:0000898,4.70e-11,6;CL:0000809,4.70e-11,6;CL:0000810,4.70e-11,6;CL:0000895,4.70e-11,6;CL:0000808,4.70e-11,6;CL:0000894,4.70e-11,6;CL:0000806,4.70e-11,6;CL:0000807,4.70e-11,6;CL:0000805,4.70e-11,6;CL:0002425,4.70e-11,6;CL:0002436,4.70e-11,6;CL:0002427,4.70e-11,6;CL:0002428,4.70e-11,6;CL:0002429,4.70e-11,6;CL:0002433,4.70e-11,6;CL:0002431,4.70e-11,6;CL:0002432,4.70e-11,6;CL:0000988,8.10e-11,32;CL:0002032,8.10e-11,32;CL:0000037,8.10e-11,32;CL:0000837,8.10e-11,32;CL:0002031,2.77e-09,25;CL:0002320,5.03e-07,46;CL:0000134,5.03e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!9.12e-22!29;UBERON:0002193!1.10e-20!48;UBERON:0002370!1.87e-20!23;UBERON:0000974!1.87e-20!23;UBERON:0004807!1.87e-20!23;UBERON:0005058!1.87e-20!23;UBERON:0003351!1.87e-20!23;UBERON:0009113!1.87e-20!23;UBERON:0003295!1.87e-20!23;UBERON:0009722!1.87e-20!23;UBERON:0005562!1.87e-20!23;UBERON:0007690!1.87e-20!23;UBERON:0002390!7.90e-20!45;UBERON:0003061!7.90e-20!45;UBERON:0006562!2.47e-19!24;UBERON:0003408!2.47e-19!24;UBERON:0001557!2.47e-19!24;UBERON:0001042!2.47e-19!24;UBERON:0008814!2.47e-19!24;UBERON:0009145!2.47e-19!24;UBERON:0000072!1.77e-16!27;UBERON:0002405!3.03e-15!70;UBERON:0000065!3.25e-14!41;UBERON:0001004!1.06e-13!42;UBERON:0005057!1.81e-13!51;UBERON:0000063!2.58e-11!35;UBERON:0003081!1.88e-09!88;UBERON:0005911!1.62e-08!69;UBERON:0003929!3.33e-08!55;UBERON:0002384!4.23e-08!46;UBERON:0000490!2.18e-07!66;UBERON:0002368!5.45e-07!60;UBERON:0001041!8.77e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.13e-18,23;UBERON:0000974,1.13e-18,23;UBERON:0004807,1.13e-18,23;UBERON:0005058,1.13e-18,23;UBERON:0003351,1.13e-18,23;UBERON:0009113,1.13e-18,23;UBERON:0003295,1.13e-18,23;UBERON:0009722,1.13e-18,23;UBERON:0005562,1.13e-18,23;UBERON:0007690,1.13e-18,23;UBERON:0006562,8.08e-18,24;UBERON:0003408,8.08e-18,24;UBERON:0001557,8.08e-18,24;UBERON:0001042,8.08e-18,24;UBERON:0008814,8.08e-18,24;UBERON:0009145,8.08e-18,24;UBERON:0000072,1.24e-15,27;UBERON:0004177,1.99e-14,29;UBERON:0005057,1.99e-14,29;UBERON:0000077,1.24e-11,35;UBERON:0007811,2.93e-11,36;UBERON:0002390,2.62e-10,45;UBERON:0003061,2.62e-10,45;UBERON:0000065,1.17e-09,41;UBERON:0002193,1.56e-09,48;UBERON:0002405,1.56e-09,48;UBERON:0001004,2.20e-09,42;UBERON:0000153,4.01e-09,43;UBERON:0002384,5.03e-07,46;UBERON:0003929,9.98e-07,55|phase1_expression=0,0,0,0,0,0,0,3.61545305636414,2.111830832275,2.34064526321993,0.171217968225505,0.0797721589953364,1.88320802924326,1.83582845079895,0,0.404950534779652,0,0.946386496074713,0.411343300817216,0.42438965179803,0,1.19149141441062,3.91799683708403,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0.7813353445238,2.09409497589519,1.17646297606203,2.04913645487534,2.42755176515577,0,0,0,0,0,0,0,0,0,1.67782606057736,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0.441683036920787,0.484875253135222,0,0,0,0,1.43778149407104,0.599902730993408,0.635351135365324,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02939162845886,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405720242777006,0.241177159752417,0,0,0.486405680325106,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0.44292937929755,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.512612642393558,0,0.370389054739423,0.376736914009382,0.136694227721025,0,1.35982743995084,1.6794174278839,0.967399816630967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,1.01362607645082,2.2596410576262,2.46849563657811,0.716106782669926,0.79472541912506,1.32214994471966,0.886137163047463,0.504832249740738,1.21930890648,0.504130925684203,0.38983152295901,1.34696578296461,1.16876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0.231867835620421|short_description=p12@Itga4}} | ||
|EntrezGene=16401 | |||
|HGNC= | |||
|MCL_coexpression_id=1148 | |||
|UniProt=E9QK91,Q00651,Q792F9,Q8BQ25 | |||
|association_with_transcript=-499bp_to_ENSMUST00000028395,ENSMUST00000155105,NM_010576,uc008kgo.1,uc008kgp.1,uc008kgq.1,uc008kgr.1_5end | |||
|description=CAGE_peak_12_at_Itga4_5end | |||
|id=chr2:79095076..79095083,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.19e-15!12;CL:0000084!2.46e-14!11;CL:0000827!2.46e-14!11;CL:0000988!2.59e-14!32;CL:0002032!2.59e-14!32;CL:0000037!2.59e-14!32;CL:0000566!2.59e-14!32;CL:0000837!2.59e-14!32;CL:0000542!3.58e-14!13;CL:0000051!3.58e-14!13;CL:0000791!1.21e-11!9;CL:0000789!1.21e-11!9;CL:0002420!1.21e-11!9;CL:0002419!1.21e-11!9;CL:0000790!1.21e-11!9;CL:0002031!9.72e-11!25;CL:0000624!1.28e-10!8;CL:0000738!5.06e-10!17;CL:0002087!5.06e-10!17;CL:0000893!3.95e-08!6;CL:0002489!3.95e-08!6;CL:0000898!3.95e-08!6;CL:0000809!3.95e-08!6;CL:0000810!3.95e-08!6;CL:0000895!3.95e-08!6;CL:0000808!3.95e-08!6;CL:0000894!3.95e-08!6;CL:0000806!3.95e-08!6;CL:0000807!3.95e-08!6;CL:0000805!3.95e-08!6;CL:0002425!3.95e-08!6;CL:0002436!3.95e-08!6;CL:0002427!3.95e-08!6;CL:0002428!3.95e-08!6;CL:0002429!3.95e-08!6;CL:0002433!3.95e-08!6;CL:0002431!3.95e-08!6;CL:0002432!3.95e-08!6;CL:0002320!4.23e-08!46;CL:0000134!4.23e-08!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.46e-20,12;CL:0000542,6.75e-19,13;CL:0000051,6.75e-19,13;CL:0000084,2.08e-17,11;CL:0000827,2.08e-17,11;CL:0000738,3.45e-14,17;CL:0002087,3.45e-14,17;CL:0000624,1.00e-12,8;CL:0000791,2.76e-11,9;CL:0000789,2.76e-11,9;CL:0002420,2.76e-11,9;CL:0002419,2.76e-11,9;CL:0000790,2.76e-11,9;CL:0000893,4.70e-11,6;CL:0002489,4.70e-11,6;CL:0000898,4.70e-11,6;CL:0000809,4.70e-11,6;CL:0000810,4.70e-11,6;CL:0000895,4.70e-11,6;CL:0000808,4.70e-11,6;CL:0000894,4.70e-11,6;CL:0000806,4.70e-11,6;CL:0000807,4.70e-11,6;CL:0000805,4.70e-11,6;CL:0002425,4.70e-11,6;CL:0002436,4.70e-11,6;CL:0002427,4.70e-11,6;CL:0002428,4.70e-11,6;CL:0002429,4.70e-11,6;CL:0002433,4.70e-11,6;CL:0002431,4.70e-11,6;CL:0002432,4.70e-11,6;CL:0000988,8.10e-11,32;CL:0002032,8.10e-11,32;CL:0000037,8.10e-11,32;CL:0000837,8.10e-11,32;CL:0002031,2.77e-09,25;CL:0002320,5.03e-07,46;CL:0000134,5.03e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!9.12e-22!29;UBERON:0002193!1.10e-20!48;UBERON:0002370!1.87e-20!23;UBERON:0000974!1.87e-20!23;UBERON:0004807!1.87e-20!23;UBERON:0005058!1.87e-20!23;UBERON:0003351!1.87e-20!23;UBERON:0009113!1.87e-20!23;UBERON:0003295!1.87e-20!23;UBERON:0009722!1.87e-20!23;UBERON:0005562!1.87e-20!23;UBERON:0007690!1.87e-20!23;UBERON:0002390!7.90e-20!45;UBERON:0003061!7.90e-20!45;UBERON:0006562!2.47e-19!24;UBERON:0003408!2.47e-19!24;UBERON:0001557!2.47e-19!24;UBERON:0001042!2.47e-19!24;UBERON:0008814!2.47e-19!24;UBERON:0009145!2.47e-19!24;UBERON:0000072!1.77e-16!27;UBERON:0002405!3.03e-15!70;UBERON:0000065!3.25e-14!41;UBERON:0001004!1.06e-13!42;UBERON:0005057!1.81e-13!51;UBERON:0000063!2.58e-11!35;UBERON:0003081!1.88e-09!88;UBERON:0005911!1.62e-08!69;UBERON:0003929!3.33e-08!55;UBERON:0002384!4.23e-08!46;UBERON:0000490!2.18e-07!66;UBERON:0002368!5.45e-07!60;UBERON:0001041!8.77e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.13e-18,23;UBERON:0000974,1.13e-18,23;UBERON:0004807,1.13e-18,23;UBERON:0005058,1.13e-18,23;UBERON:0003351,1.13e-18,23;UBERON:0009113,1.13e-18,23;UBERON:0003295,1.13e-18,23;UBERON:0009722,1.13e-18,23;UBERON:0005562,1.13e-18,23;UBERON:0007690,1.13e-18,23;UBERON:0006562,8.08e-18,24;UBERON:0003408,8.08e-18,24;UBERON:0001557,8.08e-18,24;UBERON:0001042,8.08e-18,24;UBERON:0008814,8.08e-18,24;UBERON:0009145,8.08e-18,24;UBERON:0000072,1.24e-15,27;UBERON:0004177,1.99e-14,29;UBERON:0005057,1.99e-14,29;UBERON:0000077,1.24e-11,35;UBERON:0007811,2.93e-11,36;UBERON:0002390,2.62e-10,45;UBERON:0003061,2.62e-10,45;UBERON:0000065,1.17e-09,41;UBERON:0002193,1.56e-09,48;UBERON:0002405,1.56e-09,48;UBERON:0001004,2.20e-09,42;UBERON:0000153,4.01e-09,43;UBERON:0002384,5.03e-07,46;UBERON:0003929,9.98e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,3.61545305636414,2.111830832275,2.34064526321993,0.171217968225505,0.0797721589953364,1.88320802924326,1.83582845079895,0,0.404950534779652,0,0.946386496074713,0.411343300817216,0.42438965179803,0,1.19149141441062,3.91799683708403,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0.7813353445238,2.09409497589519,1.17646297606203,2.04913645487534,2.42755176515577,0,0,0,0,0,0,0,0,0,1.67782606057736,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0.441683036920787,0.484875253135222,0,0,0,0,1.43778149407104,0.599902730993408,0.635351135365324,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02939162845886,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405720242777006,0.241177159752417,0,0,0.486405680325106,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0.44292937929755,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.512612642393558,0,0.370389054739423,0.376736914009382,0.136694227721025,0,1.35982743995084,1.6794174278839,0.967399816630967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,1.01362607645082,2.2596410576262,2.46849563657811,0.716106782669926,0.79472541912506,1.32214994471966,0.886137163047463,0.504832249740738,1.21930890648,0.504130925684203,0.38983152295901,1.34696578296461,1.16876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0.231867835620421 | |||
|short_description=p12@Itga4 | |||
}} |
Revision as of 00:42, 14 September 2013
Short description: | p12@Itga4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Itga4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1148 |
Association with transcript: | -499bp_to_ENSMUST00000028395, ENSMUST00000155105, NM_010576, uc008kgo.1, uc008kgp.1, uc008kgq.1, uc008kgr.1_5end |
EntrezGene: | Itga4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.