FFCP PHASE1:Hg19::chr1:17906670..17906682,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55160|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25540|TSSclassifier=W|UniProt=Q9HCE6|association_with_transcript=-365bp_to_ENST00000375415,NM_001011722,uc001bao.2,uc001bap.2_5end|coexpression_cluster_id=C94|description=CAGE_peak_17_at_ARHGEF10L_5end|id=chr1:17906670..17906682,+|ontology_enrichment_celltype=CL:0000181!9.22e-11!12;CL:0000417!9.22e-11!12;CL:0000668!9.22e-11!12;CL:0000414!9.22e-11!12;CL:0000412!9.22e-11!12;CL:0000182!9.22e-11!12|ontology_enrichment_celltype_v019=CL:0000182;6.00e-12;12|ontology_enrichment_celltype_v019_2=CL:0000182,6.00e-12,12|ontology_enrichment_development_v019=UBERON:0004872;6.48e-20;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!3.86e-18!35;UBERON:0000160!3.64e-13!27;UBERON:0009854!3.66e-13!23;UBERON:0004921!1.30e-12!129;UBERON:0004185!1.30e-12!129;UBERON:0009497!4.21e-12!25;UBERON:0000015!4.21e-12!25;UBERON:0002423!4.21e-12!25;UBERON:0006235!4.21e-12!25;UBERON:0004161!4.21e-12!25;UBERON:0005057!8.58e-12!26;UBERON:0009856!1.69e-11!26;UBERON:0005172!4.16e-11!55;UBERON:0005173!4.16e-11!55;UBERON:0001007!6.14e-11!155;UBERON:0001555!6.14e-11!155;UBERON:0007026!6.14e-11!155;UBERON:0004119!9.92e-11!169;UBERON:0000925!9.92e-11!169;UBERON:0006595!9.92e-11!169;UBERON:0008835!1.06e-10!22;UBERON:0003894!1.06e-10!22;UBERON:0002417!8.90e-10!61;UBERON:0000916!8.90e-10!61;UBERON:0002107!2.24e-09!19;UBERON:0006925!2.24e-09!19;UBERON:0008836!2.24e-09!19;UBERON:0007499!2.66e-09!25;UBERON:0002106!2.96e-08!3;UBERON:0004854!2.96e-08!3;UBERON:0009034!2.96e-08!3;UBERON:0002095!2.96e-08!3;UBERON:0004782!2.96e-08!3;UBERON:0003281!2.96e-08!3;UBERON:0009664!2.96e-08!3;UBERON:0002296!2.96e-08!3;UBERON:0005602!2.96e-08!3;UBERON:0001179!2.96e-08!3;UBERON:0006293!2.96e-08!3;UBERON:0000059!1.30e-07!11;UBERON:0002075!4.87e-07!18|ontology_enrichment_uberon_v019=UBERON:0002106;7.81e-45;3!UBERON:0004177;2.08e-27;5!UBERON:0005057;2.08e-27;5!UBERON:0002075;2.25e-08;18!UBERON:0002107;6.59e-08;19!UBERON:0006925;6.59e-08;19!UBERON:0005172;1.41e-07;52!UBERON:0005173;1.41e-07;52!UBERON:0002417;3.13e-07;58!UBERON:0000916;3.13e-07;58|ontology_enrichment_uberon_v019_2=UBERON:0002106,7.81e-45,3;UBERON:0004854,7.81e-45,3;UBERON:0009034,7.81e-45,3;UBERON:0002095,7.81e-45,3;UBERON:0004782,7.81e-45,3;UBERON:0003281,7.81e-45,3;UBERON:0009664,7.81e-45,3;UBERON:0002296,7.81e-45,3;UBERON:0005602,7.81e-45,3;UBERON:0001179,7.81e-45,3;UBERON:0006293,7.81e-45,3;UBERON:0004177,6.48e-20,7;UBERON:0005057,6.48e-20,7;UBERON:0000945,1.44e-17,8;UBERON:0010039,1.44e-17,8;UBERON:0004457,4.54e-12,12;UBERON:0000042,4.54e-12,12;UBERON:0003887,4.54e-12,12;UBERON:0005172,2.40e-10,54;UBERON:0005173,2.40e-10,54;UBERON:0002417,2.30e-09,60;UBERON:0000916,2.30e-09,60;UBERON:0002075,2.25e-08,18;UBERON:0002107,6.59e-08,19;UBERON:0006925,6.59e-08,19;UBERON:0008836,6.59e-08,19;UBERON:0008835,5.91e-07,22;UBERON:0003894,5.91e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.328402357799783,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,1.77236972004421,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.891547074219827,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0,0.492339221844278,0,0,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630265458457789,0.494495150286999,0.404421263125109,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55160 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25540 | |||
|TSSclassifier=W | |||
|UniProt=Q9HCE6 | |||
|association_with_transcript=-365bp_to_ENST00000375415,NM_001011722,uc001bao.2,uc001bap.2_5end | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_17_at_ARHGEF10L_5end | |||
|id=chr1:17906670..17906682,+ | |||
|ontology_enrichment_celltype=CL:0000181!9.22e-11!12;CL:0000417!9.22e-11!12;CL:0000668!9.22e-11!12;CL:0000414!9.22e-11!12;CL:0000412!9.22e-11!12;CL:0000182!9.22e-11!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;6.00e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.00e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0004872;6.48e-20;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.86e-18!35;UBERON:0000160!3.64e-13!27;UBERON:0009854!3.66e-13!23;UBERON:0004921!1.30e-12!129;UBERON:0004185!1.30e-12!129;UBERON:0009497!4.21e-12!25;UBERON:0000015!4.21e-12!25;UBERON:0002423!4.21e-12!25;UBERON:0006235!4.21e-12!25;UBERON:0004161!4.21e-12!25;UBERON:0005057!8.58e-12!26;UBERON:0009856!1.69e-11!26;UBERON:0005172!4.16e-11!55;UBERON:0005173!4.16e-11!55;UBERON:0001007!6.14e-11!155;UBERON:0001555!6.14e-11!155;UBERON:0007026!6.14e-11!155;UBERON:0004119!9.92e-11!169;UBERON:0000925!9.92e-11!169;UBERON:0006595!9.92e-11!169;UBERON:0008835!1.06e-10!22;UBERON:0003894!1.06e-10!22;UBERON:0002417!8.90e-10!61;UBERON:0000916!8.90e-10!61;UBERON:0002107!2.24e-09!19;UBERON:0006925!2.24e-09!19;UBERON:0008836!2.24e-09!19;UBERON:0007499!2.66e-09!25;UBERON:0002106!2.96e-08!3;UBERON:0004854!2.96e-08!3;UBERON:0009034!2.96e-08!3;UBERON:0002095!2.96e-08!3;UBERON:0004782!2.96e-08!3;UBERON:0003281!2.96e-08!3;UBERON:0009664!2.96e-08!3;UBERON:0002296!2.96e-08!3;UBERON:0005602!2.96e-08!3;UBERON:0001179!2.96e-08!3;UBERON:0006293!2.96e-08!3;UBERON:0000059!1.30e-07!11;UBERON:0002075!4.87e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;7.81e-45;3!UBERON:0004177;2.08e-27;5!UBERON:0005057;2.08e-27;5!UBERON:0002075;2.25e-08;18!UBERON:0002107;6.59e-08;19!UBERON:0006925;6.59e-08;19!UBERON:0005172;1.41e-07;52!UBERON:0005173;1.41e-07;52!UBERON:0002417;3.13e-07;58!UBERON:0000916;3.13e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,7.81e-45,3;UBERON:0004854,7.81e-45,3;UBERON:0009034,7.81e-45,3;UBERON:0002095,7.81e-45,3;UBERON:0004782,7.81e-45,3;UBERON:0003281,7.81e-45,3;UBERON:0009664,7.81e-45,3;UBERON:0002296,7.81e-45,3;UBERON:0005602,7.81e-45,3;UBERON:0001179,7.81e-45,3;UBERON:0006293,7.81e-45,3;UBERON:0004177,6.48e-20,7;UBERON:0005057,6.48e-20,7;UBERON:0000945,1.44e-17,8;UBERON:0010039,1.44e-17,8;UBERON:0004457,4.54e-12,12;UBERON:0000042,4.54e-12,12;UBERON:0003887,4.54e-12,12;UBERON:0005172,2.40e-10,54;UBERON:0005173,2.40e-10,54;UBERON:0002417,2.30e-09,60;UBERON:0000916,2.30e-09,60;UBERON:0002075,2.25e-08,18;UBERON:0002107,6.59e-08,19;UBERON:0006925,6.59e-08,19;UBERON:0008836,6.59e-08,19;UBERON:0008835,5.91e-07,22;UBERON:0003894,5.91e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.328402357799783,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,1.77236972004421,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.891547074219827,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0,0.492339221844278,0,0,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630265458457789,0.494495150286999,0.404421263125109,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0.437119121007915,17.4017399653763,0,0,0,0,0,0,4.41724414505312,4.31867849422967,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p17@ARHGEF10L | |||
}} |
Revision as of 02:01, 12 September 2013
Short description: | p17@ARHGEF10L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_ARHGEF10L_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | -365bp_to_ENST00000375415, NM_001011722, uc001bao.2, uc001bap.2_5end |
EntrezGene: | ARHGEF10L |
HGNC: | 25540 |
UniProt: | Q9HCE6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.00e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
spleen | 7.81e-45 | 3 |
gastrointestinal system mesentery | 7.81e-45 | 3 |
stomach region | 7.81e-45 | 3 |
mesentery | 7.81e-45 | 3 |
gastrointestinal system serosa | 7.81e-45 | 3 |
mesentery of stomach | 7.81e-45 | 3 |
gut mesentery | 7.81e-45 | 3 |
dorsal mesentery | 7.81e-45 | 3 |
dorsal mesogastrium | 7.81e-45 | 3 |
peritoneal cavity | 7.81e-45 | 3 |
spleen primordium | 7.81e-45 | 3 |
hemopoietic organ | 6.48e-20 | 7 |
immune organ | 6.48e-20 | 7 |
stomach | 1.44e-17 | 8 |
food storage organ | 1.44e-17 | 8 |
cavity lining | 4.54e-12 | 12 |
serous membrane | 4.54e-12 | 12 |
intraembryonic coelom | 4.54e-12 | 12 |
abdomen element | 2.40e-10 | 54 |
abdominal segment element | 2.40e-10 | 54 |
abdominal segment of trunk | 2.30e-09 | 60 |
abdomen | 2.30e-09 | 60 |
viscus | 2.25e-08 | 18 |
liver | 6.59e-08 | 19 |
digestive gland | 6.59e-08 | 19 |
liver bud | 6.59e-08 | 19 |
hepatic diverticulum | 5.91e-07 | 22 |
liver primordium | 5.91e-07 | 22 |
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