FFCP PHASE1:Hg19::chr1:215256114..215256128,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3776|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6277|TSSclassifier=W|UniProt=O95069|association_with_transcript=-338bp_to_ENST00000391894_5end|coexpression_cluster_id=C3938|description=CAGE_peak_7_at_KCNK2_5end|id=chr1:215256114..215256128,+|ontology_enrichment_celltype=CL:0000055!5.95e-33!180;CL:0000057!2.34e-20!75;CL:0002620!3.33e-10!23;CL:0000393!4.77e-09!60;CL:0000211!4.77e-09!60;CL:0002334!1.57e-08!12;CL:0000680!2.73e-08!57;CL:0000056!2.73e-08!57;CL:0000355!2.73e-08!57;CL:0000187!6.28e-08!54;CL:0000183!6.91e-08!59|ontology_enrichment_celltype_v019=CL:0002334;7.27e-12;12!CL:0002570;2.57e-10;8!CL:0000135;9.47e-09;3!CL:0000388;9.47e-09;3!CL:0002579;2.33e-08;3|ontology_enrichment_celltype_v019_2=CL:0000057,1.10e-14,76;CL:0002334,7.02e-12,12;CL:0002570,1.36e-10,8;CL:0000135,1.09e-08,3;CL:0000388,1.09e-08,3;CL:0002579,2.63e-08,3;CL:0000048,8.16e-08,427;CL:0000723,1.69e-07,433;CL:0000034,4.30e-07,441|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.57e-15!82;UBERON:0000475!2.94e-14!365;UBERON:0005743!1.11e-13!86;UBERON:0000073!1.74e-13!94;UBERON:0001016!1.74e-13!94;UBERON:0001049!2.75e-13!57;UBERON:0005068!2.75e-13!57;UBERON:0006241!2.75e-13!57;UBERON:0007135!2.75e-13!57;UBERON:0002616!4.94e-13!59;UBERON:0000955!7.22e-13!69;UBERON:0006238!7.22e-13!69;UBERON:0001869!1.61e-11!32;UBERON:0001893!3.77e-11!34;UBERON:0002020!4.23e-11!34;UBERON:0003528!4.23e-11!34;UBERON:0003080!5.48e-11!42;UBERON:0002791!8.90e-11!33;UBERON:0002780!2.25e-10!41;UBERON:0001890!2.25e-10!41;UBERON:0006240!2.25e-10!41;UBERON:0000914!5.47e-10!83;UBERON:0002329!5.47e-10!83;UBERON:0003077!5.47e-10!83;UBERON:0003059!5.47e-10!83;UBERON:0007282!5.47e-10!83;UBERON:0009618!5.47e-10!83;UBERON:0007285!5.47e-10!83;UBERON:0004290!3.42e-09!70;UBERON:0000486!2.48e-08!82;UBERON:0000956!4.12e-08!25;UBERON:0000203!4.12e-08!25;UBERON:0004121!5.70e-08!169;UBERON:0000033!5.90e-08!123;UBERON:0000153!1.15e-07!129;UBERON:0007811!1.15e-07!129;UBERON:0002199!1.18e-07!45;UBERON:0002416!1.18e-07!45;UBERON:0003075!1.28e-07!86;UBERON:0007284!1.28e-07!86;UBERON:0001134!1.42e-07!61;UBERON:0002036!1.42e-07!61;UBERON:0003082!1.42e-07!61;UBERON:0000924!2.30e-07!173;UBERON:0006601!2.30e-07!173;UBERON:0002385!5.03e-07!63;UBERON:0001015!5.03e-07!63;UBERON:0000383!5.03e-07!63;UBERON:0001950!6.95e-07!20;UBERON:0002097!7.05e-07!40;UBERON:0002346!9.26e-07!90|ontology_enrichment_uberon_v019=UBERON:0007846;9.47e-09;3!UBERON:0000043;9.47e-09;3!UBERON:0007845;9.47e-09;3!UBERON:0001013;2.41e-07;14!UBERON:0004457;9.03e-07;9!UBERON:0000042;9.03e-07;9!UBERON:0003688;9.46e-07;6!UBERON:0002358;9.46e-07;6!UBERON:0003684;9.46e-07;6!UBERON:0001178;9.46e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.09e-08,3;UBERON:0000043,1.09e-08,3;UBERON:0007845,1.09e-08,3;UBERON:0001013,1.36e-07,14;UBERON:0003688,7.65e-07,6;UBERON:0002358,7.65e-07,6;UBERON:0003684,7.65e-07,6;UBERON:0001178,7.65e-07,6|phase1_expression=0.363356758541113,1.71280419112787,0.845726424575827,0,1.78784437770915,1.74467704820074,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,1.10808952269109,0.408001382488506,1.88072832886853,0.572471974262113,0.821246550437305,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,2.00535164254356,0.724232594804119,1.5905718941022,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0.662045904066094,2.29469296599051,0.709336764396714,0,0,0,0.311211035399766,0,0,0.302714855289863,0,0.234321431833797,0,0,0.149448680551801,0.822041490506354,0.971237666208789,0.842704840213491,0,0.122834317311768,0,1.18800285728205,1.7308685049499,0.910161361938026,0.718618141816238,0,0,0.277064115484183,3.5118209670467,2.75839016219118,4.5071417671979,0,0.538168907066586,1.49490172172997,2.96704661623387,0.600182192168805,2.57631323096097,0.515281080091258,2.41951913231067,1.5189869901714,0.876933046450788,2.77677151668526,4.87864462804187,0.80823028409406,0.355009592516614,0.503760491138201,0.847802961552438,0,0,0,0,0,0,0.10366105501537,0,0,0,1.28648187638577,2.76269842704961,0.928735856063958,1.44375896333917,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0.22001485746285,0,0,1.690605505112,0.26593811658487,1.04007436911366,0.257207374262142,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0,0,0,0,0,0,1.30139853857622,0.773288812777695,2.51274398001523,1.91381625495949,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3776 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6277 | |||
|TSSclassifier=W | |||
|UniProt=O95069 | |||
|association_with_transcript=-338bp_to_ENST00000391894_5end | |||
|coexpression_cluster_id=C3938 | |||
|description=CAGE_peak_7_at_KCNK2_5end | |||
|id=chr1:215256114..215256128,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.95e-33!180;CL:0000057!2.34e-20!75;CL:0002620!3.33e-10!23;CL:0000393!4.77e-09!60;CL:0000211!4.77e-09!60;CL:0002334!1.57e-08!12;CL:0000680!2.73e-08!57;CL:0000056!2.73e-08!57;CL:0000355!2.73e-08!57;CL:0000187!6.28e-08!54;CL:0000183!6.91e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0002334;7.27e-12;12!CL:0002570;2.57e-10;8!CL:0000135;9.47e-09;3!CL:0000388;9.47e-09;3!CL:0002579;2.33e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.10e-14,76;CL:0002334,7.02e-12,12;CL:0002570,1.36e-10,8;CL:0000135,1.09e-08,3;CL:0000388,1.09e-08,3;CL:0002579,2.63e-08,3;CL:0000048,8.16e-08,427;CL:0000723,1.69e-07,433;CL:0000034,4.30e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.57e-15!82;UBERON:0000475!2.94e-14!365;UBERON:0005743!1.11e-13!86;UBERON:0000073!1.74e-13!94;UBERON:0001016!1.74e-13!94;UBERON:0001049!2.75e-13!57;UBERON:0005068!2.75e-13!57;UBERON:0006241!2.75e-13!57;UBERON:0007135!2.75e-13!57;UBERON:0002616!4.94e-13!59;UBERON:0000955!7.22e-13!69;UBERON:0006238!7.22e-13!69;UBERON:0001869!1.61e-11!32;UBERON:0001893!3.77e-11!34;UBERON:0002020!4.23e-11!34;UBERON:0003528!4.23e-11!34;UBERON:0003080!5.48e-11!42;UBERON:0002791!8.90e-11!33;UBERON:0002780!2.25e-10!41;UBERON:0001890!2.25e-10!41;UBERON:0006240!2.25e-10!41;UBERON:0000914!5.47e-10!83;UBERON:0002329!5.47e-10!83;UBERON:0003077!5.47e-10!83;UBERON:0003059!5.47e-10!83;UBERON:0007282!5.47e-10!83;UBERON:0009618!5.47e-10!83;UBERON:0007285!5.47e-10!83;UBERON:0004290!3.42e-09!70;UBERON:0000486!2.48e-08!82;UBERON:0000956!4.12e-08!25;UBERON:0000203!4.12e-08!25;UBERON:0004121!5.70e-08!169;UBERON:0000033!5.90e-08!123;UBERON:0000153!1.15e-07!129;UBERON:0007811!1.15e-07!129;UBERON:0002199!1.18e-07!45;UBERON:0002416!1.18e-07!45;UBERON:0003075!1.28e-07!86;UBERON:0007284!1.28e-07!86;UBERON:0001134!1.42e-07!61;UBERON:0002036!1.42e-07!61;UBERON:0003082!1.42e-07!61;UBERON:0000924!2.30e-07!173;UBERON:0006601!2.30e-07!173;UBERON:0002385!5.03e-07!63;UBERON:0001015!5.03e-07!63;UBERON:0000383!5.03e-07!63;UBERON:0001950!6.95e-07!20;UBERON:0002097!7.05e-07!40;UBERON:0002346!9.26e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;9.47e-09;3!UBERON:0000043;9.47e-09;3!UBERON:0007845;9.47e-09;3!UBERON:0001013;2.41e-07;14!UBERON:0004457;9.03e-07;9!UBERON:0000042;9.03e-07;9!UBERON:0003688;9.46e-07;6!UBERON:0002358;9.46e-07;6!UBERON:0003684;9.46e-07;6!UBERON:0001178;9.46e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.09e-08,3;UBERON:0000043,1.09e-08,3;UBERON:0007845,1.09e-08,3;UBERON:0001013,1.36e-07,14;UBERON:0003688,7.65e-07,6;UBERON:0002358,7.65e-07,6;UBERON:0003684,7.65e-07,6;UBERON:0001178,7.65e-07,6 | |||
|phase1_expression=0.363356758541113,1.71280419112787,0.845726424575827,0,1.78784437770915,1.74467704820074,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,1.10808952269109,0.408001382488506,1.88072832886853,0.572471974262113,0.821246550437305,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,2.00535164254356,0.724232594804119,1.5905718941022,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0.662045904066094,2.29469296599051,0.709336764396714,0,0,0,0.311211035399766,0,0,0.302714855289863,0,0.234321431833797,0,0,0.149448680551801,0.822041490506354,0.971237666208789,0.842704840213491,0,0.122834317311768,0,1.18800285728205,1.7308685049499,0.910161361938026,0.718618141816238,0,0,0.277064115484183,3.5118209670467,2.75839016219118,4.5071417671979,0,0.538168907066586,1.49490172172997,2.96704661623387,0.600182192168805,2.57631323096097,0.515281080091258,2.41951913231067,1.5189869901714,0.876933046450788,2.77677151668526,4.87864462804187,0.80823028409406,0.355009592516614,0.503760491138201,0.847802961552438,0,0,0,0,0,0,0.10366105501537,0,0,0,1.28648187638577,2.76269842704961,0.928735856063958,1.44375896333917,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0.22001485746285,0,0,1.690605505112,0.26593811658487,1.04007436911366,0.257207374262142,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0,0,0,0,0,0,1.30139853857622,0.773288812777695,2.51274398001523,1.91381625495949,0,0,0,0,0,0.271265023699736,0.623912584592421,1.42743191037729,2.20783381047509,1.7571212248907,1.80567659836631,0,1.03473071292505,1.32845119707087,1.10621501125022,1.65078867489357,2.15381273209015,0,0,0,0,0,0,0,1.24053903909388,0.306923946576125,0.280660094433074,3.20347873139252,2.04682899626681,2.89537058058494,0,4.93471020168498,1.9531789784444,4.10635780069046,0.519254429183621,1.39452454151951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16004861950546,0.308097234229289,0.460511024178389,1.7918754422989,1.07420244868274,1.74020032697074,0.852266274161009,0.534192213880424,0,0,0,0,0.929691098594572,0.62962469366128,4.8792608911242,0,1.06461206063404,3.47973196830029,0.55597265731176,0,0.372158369359667,0,0.190630193923825,0.511795582622668,0.42793898803392,1.59101623962968,0,0.539617372749944,0,0.235624804691373,0.404364963146632,0,0.421258456238981,0.48763373908959,4.38684281336312,2.11300293513511,0.272999822815972,0,2.26016233240486,0,0,0.876901770507525,0,0,0,0.30982349809975,0.281695602532241,0.286822704408103,0.196498082026242,0,0,4.43326034125095,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.562677665642051,0.222617410045812,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.197286811273867,0,1.11136990144637,0.969332746095218,0.463840490809256,5.98841394003583,0,0.0874599999961957,1.44999915086959,0.1137934482855,0.254253650292766,0,0,0,0.347249989866585,0.885741385813839,0.60298219312704,0,0,0,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.702793337176017,0,0.782658475728359,0,0,0,2.75465485467441,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.50648636764703,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0,0,0,0,0,0.223171457441873,0,1.44119953416961,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.668245123238271,0.335434687599266,0,0.157363764404994,0,1.97216073266129,0,0,0,0,1.08599920350743,0,1.63293680054705,0,0,0.340776043570843,0.226624183040251,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.751145584238999,0.573409195690071,0.110929051536852,0.310482014706917,0.276697269872462,0.37494122388632,0,0,0,0,0.579684114443301,1.64180283175561,2.80455971816669,1.66441758450784,2.84104507912634,1.50940741051545,0.889811221596536,0,1.36107831386915,1.08806040407946,0,0.159296767163702,0,0.155262956876259,1.24411862352257,0.53168342911599,0,0.150257608997218,0,0,0.363697318405119,0.214821114084977,0.928067519756987,0,0,3.77735275701072,4.37774335395695,0,0,0,0,0,0,0,0.179088841081487,0,0,0.353378291891762,0,0.168942440653073,0.256241518587947,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,0,0,0,0,0,0,0,1.27201740261367,0,0,0.705351887381368,0,0.770750701157514,0,0.638535436228605,0.41023272848151,2.26864526599546,0.622415272177961,1.45328081068666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| |||
|short_description=p7@KCNK2 | |||
}} |
Revision as of 03:36, 12 September 2013
Short description: | p7@KCNK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_KCNK2_5end |
Coexpression cluster: | C3938_Fibroblast_serous_Preadipocyte_tenocyte_Synoviocyte_Smooth_mesenchymal |
Association with transcript: | -338bp_to_ENST00000391894_5end |
EntrezGene: | KCNK2 |
HGNC: | 6277 |
UniProt: | O95069 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.10e-14 | 76 |
preadipocyte | 7.02e-12 | 12 |
mesenchymal stem cell of adipose | 1.36e-10 | 8 |
fibrocyte | 1.09e-08 | 3 |
tendon cell | 1.09e-08 | 3 |
omentum preadipocyte | 2.63e-08 | 3 |
multi fate stem cell | 8.16e-08 | 427 |
somatic stem cell | 1.69e-07 | 433 |
stem cell | 4.30e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.09e-08 | 3 |
tendon | 1.09e-08 | 3 |
regular connective tissue | 1.09e-08 | 3 |
adipose tissue | 1.36e-07 | 14 |
omentum | 7.65e-07 | 6 |
peritoneum | 7.65e-07 | 6 |
abdominal cavity | 7.65e-07 | 6 |
visceral peritoneum | 7.65e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.