FFCP PHASE1:Hg19::chr10:110321493..110321511,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=61bp_to_ENST00000366253_5end|coexpression_cluster_id=C53|description=CAGE_peak_2_at_ENST00000366253_5end|id=chr10:110321493..110321511,-|ontology_enrichment_celltype=CL:0000055!4.04e-17!180;CL:0002620!5.25e-12!23;CL:0000057!4.72e-10!75;CL:0005020!9.80e-10!6;CL:0002138!9.80e-10!6;CL:0005022!9.80e-10!6;CL:0002594!4.01e-09!4;CL:0002139!1.27e-08!24;CL:0000048!1.15e-07!430;CL:0000222!1.38e-07!119;CL:0000723!2.52e-07!436;CL:0000188!2.91e-07!9;CL:0002582!4.67e-07!3;CL:0000034!6.84e-07!444|ontology_enrichment_celltype_v019=CL:0002138;1.45e-17;6!CL:0002573;6.74e-10;2!CL:0002582;4.17e-09;3!CL:0002601;8.83e-08;1!CL:0002594;4.90e-07;4|ontology_enrichment_celltype_v019_2=CL:0005020,1.51e-17,6;CL:0002138,1.51e-17,6;CL:0005022,1.51e-17,6;CL:0002573,6.75e-10,2;CL:0002582,4.54e-09,3;CL:0002601,1.01e-07,1;CL:0002594,5.55e-07,4|ontology_enrichment_development_v019=CL:0005022;1.45e-17;6|ontology_enrichment_disease=DOID:2394!1.04e-12!14|ontology_enrichment_disease_v019=DOID:0060084;8.02e-10;3!DOID:127;8.02e-10;3!DOID:0060072;1.44e-07;4!DOID:2394;2.99e-07;14|ontology_enrichment_disease_v019_2=DOID:0060084,8.03e-10,3;DOID:127,8.03e-10,3;DOID:0060072,1.44e-07,4;DOID:2394,2.89e-07,14|ontology_enrichment_uberon=UBERON:0000055!1.03e-09!69;UBERON:0001310!4.01e-09!4;UBERON:0002049!1.51e-08!79;UBERON:0007798!1.51e-08!79;UBERON:0002199!1.22e-07!45;UBERON:0002416!1.22e-07!45;UBERON:0001473!3.80e-07!8;UBERON:0004536!3.80e-07!8;UBERON:0006558!3.80e-07!8|ontology_enrichment_uberon_v019=UBERON:0001473;3.24e-13;8!UBERON:0004536;3.24e-13;8!UBERON:0006558;3.24e-13;8!UBERON:0002465;1.35e-10;10!UBERON:0001310;4.90e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001473,3.35e-13,8;UBERON:0004536,3.35e-13,8;UBERON:0006558,3.35e-13,8;UBERON:0002465,1.38e-10,10;UBERON:0001310,5.55e-07,4|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,1.13061588384802,0,0,0.835979866147242,3.6178346283706,6.40379272836078,2.34304428935269,0,0.760272105718513,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0,0,0,1.06748995729705,0,0,0,0,0.151357427644931,0,0,1.87296046098192,0.570471821544449,0.896692083310806,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0.635795703478686,0,0.103052529238439,0,0.37223371266318,2.70042131586026,0.389748020644795,0,0.0920498986422993,0,1.06502877754984,0.705264687593482,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45422961193825,0.925971025153221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.868687840005475,0,1.43248770591916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0.553107505625109,0.347534457872331,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,1.07946785661859,0.710246901252508,1.8067974323038,1.03850885836724,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,2.03008508413456,0.770243085573222,0.15350367472613,0.275673144969061,0.107420244868274,0,0.596586391912706,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811641507850816,1.239293992399,0.845086807596724,0.430234056612155,0,1.07001315444375,2.12856638442359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685209623233754,0,0,0,0,0,0,0,0,0,0,0,0,1.35904206073614,0.732219924186332,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,7.60199442455198,0,7.83809664262582,0,0,2.55582032678133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.0022046388664,0,0,0,0,0,0,0.447764408660622,0.233713309847224,1.66441758450784,0.189403005275089,0.251567901752575,0,0.228840068396924,0.302461847526478,0,0,0.477890301491107,0.449803112163605,0.155262956876259,0,1.86089200190596,1.04349012362347,0,1.14241563650639,0.406870733204662,2.90957854724095,0.214821114084977,0,0.398095888698616,0,0.686791410365586,0,0,0.192619830407303,0,0,0,0,0,0,0,0,4.77060694053879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65695355226657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3813820954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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=61bp_to_ENST00000366253_5end | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_2_at_ENST00000366253_5end | |||
|id=chr10:110321493..110321511,- | |||
|ontology_enrichment_celltype=CL:0000055!4.04e-17!180;CL:0002620!5.25e-12!23;CL:0000057!4.72e-10!75;CL:0005020!9.80e-10!6;CL:0002138!9.80e-10!6;CL:0005022!9.80e-10!6;CL:0002594!4.01e-09!4;CL:0002139!1.27e-08!24;CL:0000048!1.15e-07!430;CL:0000222!1.38e-07!119;CL:0000723!2.52e-07!436;CL:0000188!2.91e-07!9;CL:0002582!4.67e-07!3;CL:0000034!6.84e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002138;1.45e-17;6!CL:0002573;6.74e-10;2!CL:0002582;4.17e-09;3!CL:0002601;8.83e-08;1!CL:0002594;4.90e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.51e-17,6;CL:0002138,1.51e-17,6;CL:0005022,1.51e-17,6;CL:0002573,6.75e-10,2;CL:0002582,4.54e-09,3;CL:0002601,1.01e-07,1;CL:0002594,5.55e-07,4 | |||
|ontology_enrichment_development_v019=CL:0005022;1.45e-17;6 | |||
|ontology_enrichment_disease=DOID:2394!1.04e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:0060084;8.02e-10;3!DOID:127;8.02e-10;3!DOID:0060072;1.44e-07;4!DOID:2394;2.99e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,8.03e-10,3;DOID:127,8.03e-10,3;DOID:0060072,1.44e-07,4;DOID:2394,2.89e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000055!1.03e-09!69;UBERON:0001310!4.01e-09!4;UBERON:0002049!1.51e-08!79;UBERON:0007798!1.51e-08!79;UBERON:0002199!1.22e-07!45;UBERON:0002416!1.22e-07!45;UBERON:0001473!3.80e-07!8;UBERON:0004536!3.80e-07!8;UBERON:0006558!3.80e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;3.24e-13;8!UBERON:0004536;3.24e-13;8!UBERON:0006558;3.24e-13;8!UBERON:0002465;1.35e-10;10!UBERON:0001310;4.90e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,3.35e-13,8;UBERON:0004536,3.35e-13,8;UBERON:0006558,3.35e-13,8;UBERON:0002465,1.38e-10,10;UBERON:0001310,5.55e-07,4 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,1.13061588384802,0,0,0.835979866147242,3.6178346283706,6.40379272836078,2.34304428935269,0,0.760272105718513,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0,0,0,1.06748995729705,0,0,0,0,0.151357427644931,0,0,1.87296046098192,0.570471821544449,0.896692083310806,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0.635795703478686,0,0.103052529238439,0,0.37223371266318,2.70042131586026,0.389748020644795,0,0.0920498986422993,0,1.06502877754984,0.705264687593482,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45422961193825,0.925971025153221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.868687840005475,0,1.43248770591916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0.553107505625109,0.347534457872331,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,1.07946785661859,0.710246901252508,1.8067974323038,1.03850885836724,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,2.03008508413456,0.770243085573222,0.15350367472613,0.275673144969061,0.107420244868274,0,0.596586391912706,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811641507850816,1.239293992399,0.845086807596724,0.430234056612155,0,1.07001315444375,2.12856638442359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685209623233754,0,0,0,0,0,0,0,0,0,0,0,0,1.35904206073614,0.732219924186332,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,7.60199442455198,0,7.83809664262582,0,0,2.55582032678133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.0022046388664,0,0,0,0,0,0,0.447764408660622,0.233713309847224,1.66441758450784,0.189403005275089,0.251567901752575,0,0.228840068396924,0.302461847526478,0,0,0.477890301491107,0.449803112163605,0.155262956876259,0,1.86089200190596,1.04349012362347,0,1.14241563650639,0.406870733204662,2.90957854724095,0.214821114084977,0,0.398095888698616,0,0.686791410365586,0,0,0.192619830407303,0,0,0,0,0,0,0,0,4.77060694053879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65695355226657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4898480832844,14.2306385947793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0.339854229375634,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@ENST00000366253 | |||
}} |
Revision as of 11:39, 10 September 2013
Short description: | p2@ENST00000366253 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000366253_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | 61bp_to_ENST00000366253_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.51e-17 | 6 |
endothelial cell of lymphatic vessel | 1.51e-17 | 6 |
vascular lymphangioblast | 1.51e-17 | 6 |
Schwann cell | 6.75e-10 | 2 |
visceral preadipocyte | 4.54e-09 | 3 |
uterine smooth muscle cell | 1.01e-07 | 1 |
smooth muscle cell of the umbilical artery | 5.55e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 3.35e-13 | 8 |
lymph vasculature | 3.35e-13 | 8 |
lymphatic part of lymphoid system | 3.35e-13 | 8 |
lymphoid system | 1.38e-10 | 10 |
umbilical artery | 5.55e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 8.03e-10 | 3 |
leiomyoma | 8.03e-10 | 3 |
benign neoplasm | 1.44e-07 | 4 |
ovarian cancer | 2.89e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.