FFCP PHASE1:Hg19::chr11:2018544..2018555,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=4713|TSSclassifier=S|UniProt=|association_with_transcript=-97bp_to_ENST00000411861_5end|coexpression_cluster_id=C227|description=CAGE_peak_21_at_H19_5end|id=chr11:2018544..2018555,-|ontology_enrichment_celltype=CL:0000188!2.24e-08!9|ontology_enrichment_celltype_v019=CL:0000349;1.05e-18;19!CL:0002577;2.45e-09;3!CL:0002541;1.00e-08;3|ontology_enrichment_celltype_v019_2=CL:0000349,1.19e-18,19;CL:0002577,2.42e-09,3;CL:0002541,1.20e-08,3|ontology_enrichment_development_v019=UBERON:0008947;2.88e-08;29|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!8.83e-15!14;UBERON:0000158!8.83e-15!14;UBERON:0001737!8.74e-13!9;UBERON:0001557!5.02e-12!19;UBERON:0000478!1.64e-11!24;UBERON:0003124!5.40e-11!7;UBERON:0003104!4.23e-10!238;UBERON:0009142!4.23e-10!238;UBERON:0004921!3.62e-09!129;UBERON:0004185!3.62e-09!129;UBERON:0000077!1.81e-08!130;UBERON:0004119!3.20e-08!169;UBERON:0000925!3.20e-08!169;UBERON:0006595!3.20e-08!169;UBERON:0000481!3.36e-08!347;UBERON:0000926!1.05e-07!448;UBERON:0004120!1.05e-07!448;UBERON:0006603!1.05e-07!448;UBERON:0001007!1.36e-07!155;UBERON:0001555!1.36e-07!155;UBERON:0007026!1.36e-07!155;UBERON:0001041!2.21e-07!98;UBERON:0004923!2.32e-07!57;UBERON:0001987!3.87e-07!4;UBERON:0004340!3.87e-07!4;UBERON:0000468!7.77e-07!659|ontology_enrichment_uberon_v019=UBERON:0001737;7.37e-22;9!UBERON:0001557;7.37e-22;9!UBERON:0000478;1.83e-19;24!UBERON:0005631;1.11e-16;10!UBERON:0000158;1.11e-16;10!UBERON:0001134;3.69e-16;16!UBERON:0002036;3.69e-16;16!UBERON:0001987;1.23e-11;4!UBERON:0000305;4.91e-10;7!UBERON:0001723;6.28e-09;3!UBERON:0001033;6.28e-09;3!UBERON:0003124;1.00e-08;3!UBERON:0000920;1.00e-08;3!UBERON:0002385;2.31e-07;31!UBERON:0001015;2.31e-07;31!UBERON:0000383;2.31e-07;31!UBERON:0000072;9.53e-07;37|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.32e-26,14;UBERON:0000158,3.32e-26,14;UBERON:0001737,8.48e-22,9;UBERON:0000478,2.11e-19,24;UBERON:0003124,1.46e-18,7;UBERON:0001557,3.14e-17,19;UBERON:0001987,1.26e-11,4;UBERON:0004340,1.26e-11,4;UBERON:0000305,5.01e-10,7;UBERON:0001723,5.82e-09,3;UBERON:0001033,5.82e-09,3;UBERON:0010056,5.82e-09,3;UBERON:0004871,1.05e-08,8;UBERON:0000072,1.16e-08,47;UBERON:0000920,1.20e-08,3;UBERON:0000065,4.36e-07,54;UBERON:0004119,5.99e-07,160;UBERON:0000925,5.99e-07,160;UBERON:0006595,5.99e-07,160|phase1_expression=0.54503513781167,0.856402095563933,0.281908808191942,0,0.446961094427288,6.97870819280295,2.53299878168311,0,0,0.491467873003018,0,12.66959958355,15.0347177590219,0.37129905888014,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24271040056923,0,0,0,0,0.326923806226917,0.454072282934794,14.98057403648,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,1.04574548582567,0.621966330092223,0,0,0,0,0,0,0,7.45332840251016,5.56329477257736,6.02527574708705,9.70586960045067,6.10062443458737,5.93176547777742,7.14605933248871,6.08286541888573,6.92544882503503,0.738155454624648,0,0.4115740113314,7.3504355692771,0,0,1.18157981336281,0,0,0,0,0,0,2.96283024507295,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,39.6113771935753,0.823240336780769,0,1.06617584622764,0,0,0,0,0,0,0,0,0,0,1.59259437334337,5.95881335396112,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,1.00034104211935,0.542530047399471,0,0,0,0,0,0,0,0,0.184369168541703,0,11.1606659753762,15.0983106476777,0,0,0,17.581399143883,44.9375686678342,25.4007846396931,0.248107807818777,0,1.40330047216537,0.512556597022804,0,0.804269605718038,4.45254199334973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0.215915916102139,7.71136263451447,0.270946437543853,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,2.22342652071881,0.462145851343933,1.22802939780904,0.964856007391714,0.322260734604821,1.30515024522806,1.27839941124151,9.70449188549437,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,6.41908482050881,0,0,0.359744915166629,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08073945114433,0,0,0,0.658589785919804,0,0.699869440489966,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.6043161074736,14.2543046799667,92.4553713318689,0,0,0,0,0,0.398495976502139,0,1.51159648712566,0,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,1.41832609060762,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0.23056390438806,5.92400453104496,2.39024218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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-97bp_to_ENST00000411861_5end | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_21_at_H19_5end | |||
|id=chr11:2018544..2018555,- | |||
|ontology_enrichment_celltype=CL:0000188!2.24e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.05e-18;19!CL:0002577;2.45e-09;3!CL:0002541;1.00e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.19e-18,19;CL:0002577,2.42e-09,3;CL:0002541,1.20e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.88e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!8.83e-15!14;UBERON:0000158!8.83e-15!14;UBERON:0001737!8.74e-13!9;UBERON:0001557!5.02e-12!19;UBERON:0000478!1.64e-11!24;UBERON:0003124!5.40e-11!7;UBERON:0003104!4.23e-10!238;UBERON:0009142!4.23e-10!238;UBERON:0004921!3.62e-09!129;UBERON:0004185!3.62e-09!129;UBERON:0000077!1.81e-08!130;UBERON:0004119!3.20e-08!169;UBERON:0000925!3.20e-08!169;UBERON:0006595!3.20e-08!169;UBERON:0000481!3.36e-08!347;UBERON:0000926!1.05e-07!448;UBERON:0004120!1.05e-07!448;UBERON:0006603!1.05e-07!448;UBERON:0001007!1.36e-07!155;UBERON:0001555!1.36e-07!155;UBERON:0007026!1.36e-07!155;UBERON:0001041!2.21e-07!98;UBERON:0004923!2.32e-07!57;UBERON:0001987!3.87e-07!4;UBERON:0004340!3.87e-07!4;UBERON:0000468!7.77e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.37e-22;9!UBERON:0001557;7.37e-22;9!UBERON:0000478;1.83e-19;24!UBERON:0005631;1.11e-16;10!UBERON:0000158;1.11e-16;10!UBERON:0001134;3.69e-16;16!UBERON:0002036;3.69e-16;16!UBERON:0001987;1.23e-11;4!UBERON:0000305;4.91e-10;7!UBERON:0001723;6.28e-09;3!UBERON:0001033;6.28e-09;3!UBERON:0003124;1.00e-08;3!UBERON:0000920;1.00e-08;3!UBERON:0002385;2.31e-07;31!UBERON:0001015;2.31e-07;31!UBERON:0000383;2.31e-07;31!UBERON:0000072;9.53e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.32e-26,14;UBERON:0000158,3.32e-26,14;UBERON:0001737,8.48e-22,9;UBERON:0000478,2.11e-19,24;UBERON:0003124,1.46e-18,7;UBERON:0001557,3.14e-17,19;UBERON:0001987,1.26e-11,4;UBERON:0004340,1.26e-11,4;UBERON:0000305,5.01e-10,7;UBERON:0001723,5.82e-09,3;UBERON:0001033,5.82e-09,3;UBERON:0010056,5.82e-09,3;UBERON:0004871,1.05e-08,8;UBERON:0000072,1.16e-08,47;UBERON:0000920,1.20e-08,3;UBERON:0000065,4.36e-07,54;UBERON:0004119,5.99e-07,160;UBERON:0000925,5.99e-07,160;UBERON:0006595,5.99e-07,160 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.281908808191942,0,0.446961094427288,6.97870819280295,2.53299878168311,0,0,0.491467873003018,0,12.66959958355,15.0347177590219,0.37129905888014,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24271040056923,0,0,0,0,0.326923806226917,0.454072282934794,14.98057403648,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,1.04574548582567,0.621966330092223,0,0,0,0,0,0,0,7.45332840251016,5.56329477257736,6.02527574708705,9.70586960045067,6.10062443458737,5.93176547777742,7.14605933248871,6.08286541888573,6.92544882503503,0.738155454624648,0,0.4115740113314,7.3504355692771,0,0,1.18157981336281,0,0,0,0,0,0,2.96283024507295,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,39.6113771935753,0.823240336780769,0,1.06617584622764,0,0,0,0,0,0,0,0,0,0,1.59259437334337,5.95881335396112,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,1.00034104211935,0.542530047399471,0,0,0,0,0,0,0,0,0.184369168541703,0,11.1606659753762,15.0983106476777,0,0,0,17.581399143883,44.9375686678342,25.4007846396931,0.248107807818777,0,1.40330047216537,0.512556597022804,0,0.804269605718038,4.45254199334973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0.215915916102139,7.71136263451447,0.270946437543853,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,2.22342652071881,0.462145851343933,1.22802939780904,0.964856007391714,0.322260734604821,1.30515024522806,1.27839941124151,9.70449188549437,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,6.41908482050881,0,0,0.359744915166629,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08073945114433,0,0,0,0.658589785919804,0,0.699869440489966,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.6043161074736,14.2543046799667,92.4553713318689,0,0,0,0,0,0.398495976502139,0,1.51159648712566,0,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,1.41832609060762,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0.23056390438806,5.92400453104496,2.39024218228418,31.58111481346,1.09917112082235,105.54088565169,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,1.83309043480088,0,0,0,0,21.6695964770673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0.0967563312890851,0,0,0.387956065953678,0,2.71176888936639,0,0,0.0633107959558787,0,0,0.213452994739353,28.1731549510804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,1.71690419254628,0.446342914883745,2.21705459206197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.944182586429966,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.439656701034247,25.1763088933221,0,0,0,0,0.106787412567695,0.943225830597996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2007774105683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,1.61737217095023,0,0.873677105536111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,11.3215152827331,0,0,0,0.225630985047772,0,0,6.80957405651698,0,0.591424344868181,0,0,0,0,0,1.09651553371436,0.992422356778588,0,0.127762427639595,0,0,0,0,7.18489198317375,0,0,0,0,0,0,0.313972371402056,0,1.12108865325516,4.56579360254748,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,1.3746412112643,0,0,0,0,0,3.88457302312737,2.46390736454993,9.27851545070559,5.34282092365053,0,0,0,0,0,0,0,0.874238242015829,0,0.735444965261716,0,0,0,0,0,0,0.966868319603658,0,0,0,0,0,0,0,0,0,0,8.99345628876181,0.371995018166751,0,11.6809171773423,0,0.109265571963696,0,0,0,0,0,0.454672189309436,0.267964130156178,0,0,1.70587185520785,5.71354635512977,0,0.186224142887574,0,0,1.61693751166575,7.83780292429061,24.9830309792255,0.202056159043763,0.286888821570705,6.32054677437425,0.162806537221949,0,0,0,9.38563769613817,0.122241444182866,4.06896178315738,0,0.402547587182052,0 | |||
|short_description=p21@H19 | |||
}} |
Revision as of 17:09, 10 September 2013
Short description: | p21@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | -97bp_to_ENST00000411861_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.19e-18 | 19 |
placental epithelial cell | 2.42e-09 | 3 |
chorionic membrane mesenchymal stem cell | 1.20e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.32e-26 | 14 |
membranous layer | 3.32e-26 | 14 |
larynx | 8.48e-22 | 9 |
extraembryonic structure | 2.11e-19 | 24 |
chorion | 1.46e-18 | 7 |
upper respiratory tract | 3.14e-17 | 19 |
placenta | 1.26e-11 | 4 |
allantois | 1.26e-11 | 4 |
amnion | 5.01e-10 | 7 |
tongue | 5.82e-09 | 3 |
gustatory system | 5.82e-09 | 3 |
future tongue | 5.82e-09 | 3 |
somatic layer of lateral plate mesoderm | 1.05e-08 | 8 |
segment of respiratory tract | 1.16e-08 | 47 |
egg chorion | 1.20e-08 | 3 |
respiratory tract | 4.36e-07 | 54 |
endoderm-derived structure | 5.99e-07 | 160 |
endoderm | 5.99e-07 | 160 |
presumptive endoderm | 5.99e-07 | 160 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.