FFCP PHASE1:Hg19::chr11:46403617..46403626,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4192|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6972|TSSclassifier=S|UniProt=|association_with_transcript=356bp_to_ENST00000481047_5end|description=CAGE_peak_12_at_MDK_5end|id=chr11:46403617..46403626,+|ontology_enrichment_celltype=CL:0002321!4.44e-14!248;CL:0000066!6.16e-14!254;CL:0000220!2.45e-13!246;CL:0000222!9.70e-10!119;CL:0000213!2.60e-08!57;CL:0000215!2.60e-08!57;CL:0002078!6.52e-08!44;CL:0000115!2.35e-07!35|ontology_enrichment_celltype_v019=CL:0000075;3.32e-11;27!CL:0002322;1.84e-08;5!CL:0000064;2.42e-08;3!CL:0000067;2.42e-08;3!CL:0005012;2.42e-08;3!CL:0002304;2.42e-08;3!CL:0000710;5.93e-07;20|ontology_enrichment_celltype_v019_2=CL:0000075,2.41e-11,27;CL:0002322,1.08e-08,5;CL:0000064,4.32e-08,3;CL:0000067,4.32e-08,3;CL:0005012,4.32e-08,3;CL:0002304,4.32e-08,3;CL:0000066,2.60e-07,253;CL:0002078,3.32e-07,45;CL:0000710,5.73e-07,20;CL:0000306,7.91e-07,4;CL:0002222,7.91e-07,4;CL:0002224,7.91e-07,4;CL:0000115,8.48e-07,36|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007625!6.18e-08!11;UBERON:0000490!3.36e-07!138;UBERON:0003914!5.57e-07!118|ontology_enrichment_uberon_v019=UBERON:0007625;8.44e-11;11!UBERON:0001778;2.42e-08;3!UBERON:0001775;2.42e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0007625,6.21e-11,11;UBERON:0001778,4.32e-08,3;UBERON:0001775,4.32e-08,3;UBERON:0010077,7.91e-07,4;UBERON:0005389,7.91e-07,4;UBERON:0000484,7.91e-07,4;UBERON:0002546,7.91e-07,4;UBERON:0000965,7.91e-07,4;UBERON:0001803,7.91e-07,4;UBERON:0003073,7.91e-07,4;UBERON:0005426,7.91e-07,4|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0.737201809504527,1.39560233594486,0,0.791300934685361,0.247532705920093,0.331397375727916,0,0.602694528023977,0,0,0.861847406537515,0.816002764977012,0.940364164434263,0.286235987131057,1.23186982565596,0.753255837568817,0,0.0821005894499457,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,1.34140171940727,0.12786256184353,0,0,0.289693037921647,0,0,1.32348744029695,1.33037638477538,1.05401742831751,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0.838998872419812,0.550236083880135,0.626984899610432,0.258416759169329,0.71153252537342,1.00416183829401,0.805658634218294,3.80136052859256,0.976248230192678,0,3.24056779152704,0.625098097988558,0.44905874525234,0.225222960966644,0,0,1.09921046358244,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0.134710672069688,0.326923806226917,0.302714855289863,0,0.468642863667593,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0.61417158655884,0,1.18800285728205,1.48360157567134,0,0.718618141816238,0,0.250237039743928,0,0.438977620880838,0,0.751190294532984,0.340296549480063,0,0.213557388818567,0.211931901159562,0.300091096084402,0.412210116953756,0,0,0,0.0974370051611986,0.252433774244115,0.184099797284599,0.80823028409406,0,0.201504196455281,0,0,0,0,1.46368447355514,0.927708378250397,1.2781333715647,1.96956004529204,1.26160425437814,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,1.40241773803446,0.8231480226628,4.41026134156626,0,0,0,0,0,0.514703430895577,0,0,0,0.0925884451585296,0,0,1.44331342025273,1.62302566965108,0.587043471179108,1.01056513432752,1.85194205030644,0.570762456703795,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0.336393253036082,0,0.07333828582095,0.517086863031111,3.57656445851882,0,0,0,0.514414748524284,0,0.266422179016099,0,2.71310802695722,0,0,0.355391948742546,0.791951872933429,0.301439377059586,2.61460037580088,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0.335032530668698,0,0,0,0,0.613457458595699,2.00068208423871,0.271265023699736,0,0.713715955188647,0,0.117141414992713,0.601892199455438,9.09630016223939,1.03473071292505,0.664225598535437,0.737476674166813,0.0868836144680828,0.979005787313703,0.343143423810856,0,0,0,0.606255142892519,0,1.5119514666484,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0,0,0.232420756919918,3.14234568938218,0.200506470303285,0.368323955743585,0.68888668898764,0.546273504020151,0.786746489756545,0,0.231046011313244,2.35304930753057,0,0.105551628892876,2.27466768141793,0.510281115829547,0.215915916102139,3.08454505380579,0.541892875087706,0.501689773854853,0.509752546090077,0,1.34324852833307,0,0,0.512900250232778,1.64007322849853,0.976135183992909,0.206082023295445,0.27470839445503,0.082509499920588,0,0,0,0.48335359146061,0.462145851343933,0.921022048356777,0.275673144969061,0.644521469209642,0.870100163485371,0.426133137080504,0.623224249527161,0.165284915360978,0.576570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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4192 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6972 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=356bp_to_ENST00000481047_5end | |||
|description=CAGE_peak_12_at_MDK_5end | |||
|id=chr11:46403617..46403626,+ | |||
|ontology_enrichment_celltype=CL:0002321!4.44e-14!248;CL:0000066!6.16e-14!254;CL:0000220!2.45e-13!246;CL:0000222!9.70e-10!119;CL:0000213!2.60e-08!57;CL:0000215!2.60e-08!57;CL:0002078!6.52e-08!44;CL:0000115!2.35e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000075;3.32e-11;27!CL:0002322;1.84e-08;5!CL:0000064;2.42e-08;3!CL:0000067;2.42e-08;3!CL:0005012;2.42e-08;3!CL:0002304;2.42e-08;3!CL:0000710;5.93e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000075,2.41e-11,27;CL:0002322,1.08e-08,5;CL:0000064,4.32e-08,3;CL:0000067,4.32e-08,3;CL:0005012,4.32e-08,3;CL:0002304,4.32e-08,3;CL:0000066,2.60e-07,253;CL:0002078,3.32e-07,45;CL:0000710,5.73e-07,20;CL:0000306,7.91e-07,4;CL:0002222,7.91e-07,4;CL:0002224,7.91e-07,4;CL:0000115,8.48e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!6.18e-08!11;UBERON:0000490!3.36e-07!138;UBERON:0003914!5.57e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;8.44e-11;11!UBERON:0001778;2.42e-08;3!UBERON:0001775;2.42e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,6.21e-11,11;UBERON:0001778,4.32e-08,3;UBERON:0001775,4.32e-08,3;UBERON:0010077,7.91e-07,4;UBERON:0005389,7.91e-07,4;UBERON:0000484,7.91e-07,4;UBERON:0002546,7.91e-07,4;UBERON:0000965,7.91e-07,4;UBERON:0001803,7.91e-07,4;UBERON:0003073,7.91e-07,4;UBERON:0005426,7.91e-07,4 | |||
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| |||
|short_description=p12@MDK | |||
}} |
Revision as of 17:55, 10 September 2013
Short description: | p12@MDK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_MDK_5end |
Coexpression cluster: | NA |
Association with transcript: | 356bp_to_ENST00000481047_5end |
EntrezGene: | MDK |
HGNC: | 6972 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
columnar/cuboidal epithelial cell | 2.41e-11 | 27 |
embryonic stem cell | 1.08e-08 | 5 |
ciliated cell | 4.32e-08 | 3 |
ciliated epithelial cell | 4.32e-08 | 3 |
multi-ciliated epithelial cell | 4.32e-08 | 3 |
non-pigmented ciliary epithelial cell | 4.32e-08 | 3 |
epithelial cell | 2.60e-07 | 253 |
meso-epithelial cell | 3.32e-07 | 45 |
neurecto-epithelial cell | 5.73e-07 | 20 |
crystallin accumulating cell | 7.91e-07 | 4 |
vertebrate lens cell | 7.91e-07 | 4 |
lens epithelial cell | 7.91e-07 | 4 |
endothelial cell | 8.48e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 6.21e-11 | 11 |
ciliary epithelium | 4.32e-08 | 3 |
ciliary body | 4.32e-08 | 3 |
cuboidal epithelium | 7.91e-07 | 4 |
transparent eye structure | 7.91e-07 | 4 |
simple cuboidal epithelium | 7.91e-07 | 4 |
cranial placode | 7.91e-07 | 4 |
lens of camera-type eye | 7.91e-07 | 4 |
epithelium of lens | 7.91e-07 | 4 |
lens placode | 7.91e-07 | 4 |
lens vesicle | 7.91e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.