FFCP PHASE1:Hg19::chr12:2374154..2374159,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:2374154..2374159,-|id=chr12:2374154..2374159,-|ontology_enrichment_celltype=CL:0000055!2.33e-26!180;CL:0000057!5.48e-22!75;CL:0000048!1.49e-14!430;CL:0000723!7.55e-14!436;CL:0000034!6.03e-13!444;CL:0000680!6.72e-10!57;CL:0000056!6.72e-10!57;CL:0000355!6.72e-10!57;CL:0000144!9.57e-10!625;CL:0002371!4.30e-09!591;CL:0002334!6.54e-09!12;CL:0000187!7.15e-09!54;CL:0002320!2.97e-08!365;CL:0000134!7.62e-08!358;CL:0000183!1.81e-07!59;CL:0002620!1.95e-07!23;CL:0000393!3.20e-07!60;CL:0000211!3.20e-07!60;CL:0000192!7.31e-07!42;CL:0000514!7.31e-07!42|ontology_enrichment_celltype_v019=CL:0002559;1.36e-17;5!CL:0002541;9.27e-12;3!CL:0000723;1.20e-11;61!CL:0000346;1.30e-11;3!CL:1000428;1.30e-11;3!CL:0000134;1.41e-10;55!CL:0000048;6.46e-09;58!CL:0000680;7.26e-08;7!CL:0002195;1.07e-07;2!CL:0002561;1.07e-07;2!CL:0002571;1.07e-07;2!CL:0002617;1.07e-07;2!CL:0002334;2.64e-07;12|ontology_enrichment_celltype_v019_2=CL:0002559,5.30e-18,5;CL:0000057,4.27e-15,76;CL:0000346,6.55e-12,3;CL:1000428,6.55e-12,3;CL:0002541,1.55e-11,3;CL:0000048,1.18e-10,427;CL:0000723,2.39e-10,433;CL:0000034,5.94e-10,441;CL:0000134,8.44e-09,354;CL:0002320,1.94e-08,361;CL:0002617,7.14e-08,2;CL:0002195,8.20e-08,2;CL:0002561,8.20e-08,2;CL:0002571,8.20e-08,2;CL:0000219,3.57e-07,386;CL:0002334,4.42e-07,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!3.56e-11!83;UBERON:0002329!3.56e-11!83;UBERON:0003077!3.56e-11!83;UBERON:0003059!3.56e-11!83;UBERON:0007282!3.56e-11!83;UBERON:0009618!3.56e-11!83;UBERON:0007285!3.56e-11!83;UBERON:0002384!4.21e-09!375;UBERON:0004290!4.94e-09!70;UBERON:0002385!8.04e-09!63;UBERON:0001015!8.04e-09!63;UBERON:0000383!8.04e-09!63;UBERON:0001134!1.09e-08!61;UBERON:0002036!1.09e-08!61;UBERON:0003082!1.09e-08!61;UBERON:0000486!3.10e-08!82;UBERON:0005256!6.22e-08!143;UBERON:0003102!6.36e-08!95;UBERON:0002199!1.27e-07!45;UBERON:0002416!1.27e-07!45;UBERON:0005631!9.97e-07!14;UBERON:0000158!9.97e-07!14|ontology_enrichment_uberon_v019=UBERON:0002073;1.36e-17;5!UBERON:0003124;9.27e-12;3!UBERON:0000920;9.27e-12;3!UBERON:0000412;1.30e-11;3!UBERON:0001992;1.30e-11;3!UBERON:0005631;1.06e-08;10!UBERON:0000158;1.06e-08;10!UBERON:0005933;1.07e-07;2!UBERON:0005942;1.07e-07;2!UBERON:0005932;1.07e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002073,5.30e-18,5;UBERON:0005086,5.30e-18,5;UBERON:0000412,6.55e-12,3;UBERON:0001992,6.55e-12,3;UBERON:0000920,1.55e-11,3;UBERON:0002384,2.33e-09,371;UBERON:0005933,8.20e-08,2;UBERON:0005942,8.20e-08,2;UBERON:0005932,8.20e-08,2;UBERON:0002199,4.55e-07,46;UBERON:0002416,4.55e-07,46|phase1_expression=1.63510541343501,1.71280419112787,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0.436882744260345,0.791300934685361,0.123766352960047,0,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.289693037921647,0.795285947051099,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,18.5372853138506,1.14734648299525,0,0,1.06748995729705,0,0.311211035399766,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.309977343527296,3.56400857184616,1.97813543422845,0,2.87447256726495,0,0,1.6623846929051,1.75591048352335,2.75839016219118,0.901428353439581,0.113432183160021,0,0.640672166455702,1.90738711043606,0.300091096084402,0.206105058476878,1.54584324027377,0.930584281657949,1.35021065793013,0.194874010322397,0.504867548488229,1.65689817556139,0.323292113637624,0.710019185033229,0.10075209822764,2.20428770003634,0.193260853163297,0,0,0,0,0,0,0,0,7.8224766164908,1.92972281457866,2.76269842704961,1.85747171212792,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0.845302752556,0.26593811658487,0,0,0,0.266422179016099,1.85871391755592,0,0,1.62868092146868,1.42156779497018,0,0.602878754119172,3.48613383440118,0.499864955910285,0,0,0,0,1.14861935834114,0,1.88215698667853,0,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0.623912584592421,0.892144943985809,2.05013139544115,1.05427273493442,0,0,2.0694614258501,0,1.47495334833363,0.60818530127658,0,0,0,0,0,0,0,0.30239029332968,0.992431231275107,5.83155498494637,0.561320188866147,0.384417447767103,1.02341449813341,0.482561763430822,0,0.616838775210622,4.6166048581413,2.13530605635904,0,1.04589340613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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:2374154..2374159,- | |||
|id=chr12:2374154..2374159,- | |||
|ontology_enrichment_celltype=CL:0000055!2.33e-26!180;CL:0000057!5.48e-22!75;CL:0000048!1.49e-14!430;CL:0000723!7.55e-14!436;CL:0000034!6.03e-13!444;CL:0000680!6.72e-10!57;CL:0000056!6.72e-10!57;CL:0000355!6.72e-10!57;CL:0000144!9.57e-10!625;CL:0002371!4.30e-09!591;CL:0002334!6.54e-09!12;CL:0000187!7.15e-09!54;CL:0002320!2.97e-08!365;CL:0000134!7.62e-08!358;CL:0000183!1.81e-07!59;CL:0002620!1.95e-07!23;CL:0000393!3.20e-07!60;CL:0000211!3.20e-07!60;CL:0000192!7.31e-07!42;CL:0000514!7.31e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002559;1.36e-17;5!CL:0002541;9.27e-12;3!CL:0000723;1.20e-11;61!CL:0000346;1.30e-11;3!CL:1000428;1.30e-11;3!CL:0000134;1.41e-10;55!CL:0000048;6.46e-09;58!CL:0000680;7.26e-08;7!CL:0002195;1.07e-07;2!CL:0002561;1.07e-07;2!CL:0002571;1.07e-07;2!CL:0002617;1.07e-07;2!CL:0002334;2.64e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002559,5.30e-18,5;CL:0000057,4.27e-15,76;CL:0000346,6.55e-12,3;CL:1000428,6.55e-12,3;CL:0002541,1.55e-11,3;CL:0000048,1.18e-10,427;CL:0000723,2.39e-10,433;CL:0000034,5.94e-10,441;CL:0000134,8.44e-09,354;CL:0002320,1.94e-08,361;CL:0002617,7.14e-08,2;CL:0002195,8.20e-08,2;CL:0002561,8.20e-08,2;CL:0002571,8.20e-08,2;CL:0000219,3.57e-07,386;CL:0002334,4.42e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.56e-11!83;UBERON:0002329!3.56e-11!83;UBERON:0003077!3.56e-11!83;UBERON:0003059!3.56e-11!83;UBERON:0007282!3.56e-11!83;UBERON:0009618!3.56e-11!83;UBERON:0007285!3.56e-11!83;UBERON:0002384!4.21e-09!375;UBERON:0004290!4.94e-09!70;UBERON:0002385!8.04e-09!63;UBERON:0001015!8.04e-09!63;UBERON:0000383!8.04e-09!63;UBERON:0001134!1.09e-08!61;UBERON:0002036!1.09e-08!61;UBERON:0003082!1.09e-08!61;UBERON:0000486!3.10e-08!82;UBERON:0005256!6.22e-08!143;UBERON:0003102!6.36e-08!95;UBERON:0002199!1.27e-07!45;UBERON:0002416!1.27e-07!45;UBERON:0005631!9.97e-07!14;UBERON:0000158!9.97e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;1.36e-17;5!UBERON:0003124;9.27e-12;3!UBERON:0000920;9.27e-12;3!UBERON:0000412;1.30e-11;3!UBERON:0001992;1.30e-11;3!UBERON:0005631;1.06e-08;10!UBERON:0000158;1.06e-08;10!UBERON:0005933;1.07e-07;2!UBERON:0005942;1.07e-07;2!UBERON:0005932;1.07e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002073,5.30e-18,5;UBERON:0005086,5.30e-18,5;UBERON:0000412,6.55e-12,3;UBERON:0001992,6.55e-12,3;UBERON:0000920,1.55e-11,3;UBERON:0002384,2.33e-09,371;UBERON:0005933,8.20e-08,2;UBERON:0005942,8.20e-08,2;UBERON:0005932,8.20e-08,2;UBERON:0002199,4.55e-07,46;UBERON:0002416,4.55e-07,46 | |||
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|short_description=p@chr12:2374154..2374159,- | |||
}} |
Revision as of 22:11, 10 September 2013
Short description: | p@chr12:2374154..2374159, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:2374154..2374159, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 5.30e-18 | 5 |
fibroblast | 4.27e-15 | 76 |
hair follicle dermal papilla cell | 6.55e-12 | 3 |
stem cell of epidermis | 6.55e-12 | 3 |
chorionic membrane mesenchymal stem cell | 1.55e-11 | 3 |
multi fate stem cell | 1.18e-10 | 427 |
somatic stem cell | 2.39e-10 | 433 |
stem cell | 5.94e-10 | 441 |
mesenchymal cell | 8.44e-09 | 354 |
connective tissue cell | 1.94e-08 | 361 |
adipocyte of breast | 7.14e-08 | 2 |
hepatic stem cell | 8.20e-08 | 2 |
outer root sheath cell | 8.20e-08 | 2 |
hepatic mesenchymal stem cell | 8.20e-08 | 2 |
motile cell | 3.57e-07 | 386 |
preadipocyte | 4.42e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hair follicle | 5.30e-18 | 5 |
hair follicle placode | 5.30e-18 | 5 |
dermal papilla | 6.55e-12 | 3 |
papillary layer of dermis | 6.55e-12 | 3 |
egg chorion | 1.55e-11 | 3 |
connective tissue | 2.33e-09 | 371 |
hair root sheath | 8.20e-08 | 2 |
hair outer root sheath | 8.20e-08 | 2 |
bulb of hair follicle | 8.20e-08 | 2 |
integument | 4.55e-07 | 46 |
integumental system | 4.55e-07 | 46 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.