FFCP PHASE1:Hg19::chr12:53994805..53994817,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11016|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=792|TSSclassifier=S|UniProt=P17544,B2RMP1,F8VWG7|association_with_transcript=0bp_to_ENST00000328463,ENST00000456903,ENST00000548118,ENST00000548446,ENST00000551480,NM_001130059,uc001sdy.2_5end|description=CAGE_peak_7_at_ATF7_5end|id=chr12:53994805..53994817,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000632;2.93e-23;3!CL:0000327;1.18e-18;15!CL:0000138;2.74e-12;6!CL:0000499;1.50e-10;28!CL:0000188;1.08e-08;9!CL:0000153;1.21e-08;9!CL:0000447;1.21e-08;9!CL:0000151;1.27e-08;36|ontology_enrichment_celltype_v019_2=CL:0000632,2.62e-23,3;CL:0000327,1.13e-18,15;CL:0000058,2.74e-12,6;CL:0000138,2.74e-12,6;CL:0000499,1.47e-10,28;CL:0000188,1.12e-08,9;CL:0000153,1.21e-08,9;CL:0000447,1.21e-08,9;CL:0000151,1.85e-08,36|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;4.66e-66;1!DOID:4549;4.66e-66;1!DOID:5861;4.66e-66;1!DOID:6496;4.66e-66;1!DOID:201;2.74e-12;6!DOID:0060100;2.74e-12;6|ontology_enrichment_disease_v019_2=DOID:3371,4.66e-66,1;DOID:4549,4.66e-66,1;DOID:5861,4.66e-66,1;DOID:6496,4.66e-66,1;DOID:201,2.74e-12,6;DOID:0060100,2.74e-12,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002418;4.09e-23;3!UBERON:0004755;4.09e-23;3|ontology_enrichment_uberon_v019_2=UBERON:0002418,4.09e-23,3;UBERON:0004755,4.09e-23,3|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0.749007023947182,0,0,0.49076596687656,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0.290033387828457,0.0852266274161009,2.49289699810865,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0.547364367646998,0,0,0,0,0.30607276163049,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.235585773681,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0,0,0.413373593002368,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0,0,0,0.470317296361523,0,0.707029641304878,0.392616934229891,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0.160482733378337,0,0,0.143339583151451,0,0,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.714193294391221,0,0.186224142887574,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0|short_description=p7@ATF7}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=11016 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=792 | |||
|TSSclassifier=S | |||
|UniProt=P17544,B2RMP1,F8VWG7 | |||
|association_with_transcript=0bp_to_ENST00000328463,ENST00000456903,ENST00000548118,ENST00000548446,ENST00000551480,NM_001130059,uc001sdy.2_5end | |||
|description=CAGE_peak_7_at_ATF7_5end | |||
|id=chr12:53994805..53994817,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000632;2.93e-23;3!CL:0000327;1.18e-18;15!CL:0000138;2.74e-12;6!CL:0000499;1.50e-10;28!CL:0000188;1.08e-08;9!CL:0000153;1.21e-08;9!CL:0000447;1.21e-08;9!CL:0000151;1.27e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,2.62e-23,3;CL:0000327,1.13e-18,15;CL:0000058,2.74e-12,6;CL:0000138,2.74e-12,6;CL:0000499,1.47e-10,28;CL:0000188,1.12e-08,9;CL:0000153,1.21e-08,9;CL:0000447,1.21e-08,9;CL:0000151,1.85e-08,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;4.66e-66;1!DOID:4549;4.66e-66;1!DOID:5861;4.66e-66;1!DOID:6496;4.66e-66;1!DOID:201;2.74e-12;6!DOID:0060100;2.74e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,4.66e-66,1;DOID:4549,4.66e-66,1;DOID:5861,4.66e-66,1;DOID:6496,4.66e-66,1;DOID:201,2.74e-12,6;DOID:0060100,2.74e-12,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;4.09e-23;3!UBERON:0004755;4.09e-23;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,4.09e-23,3;UBERON:0004755,4.09e-23,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0.749007023947182,0,0,0.49076596687656,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0.290033387828457,0.0852266274161009,2.49289699810865,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0.547364367646998,0,0,0,0,0.30607276163049,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.235585773681,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0,0,0.413373593002368,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0,0,0,0.470317296361523,0,0.707029641304878,0.392616934229891,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0.160482733378337,0,0,0.143339583151451,0,0,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.714193294391221,0,0.186224142887574,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p7@ATF7 | |||
}} |
Revision as of 23:19, 10 September 2013
Short description: | p7@ATF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_ATF7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000328463, ENST00000456903, ENST00000548118, ENST00000548446, ENST00000551480, NM_001130059, uc001sdy.2_5end |
EntrezGene: | ATF7 |
HGNC: | 792 |
UniProt: | P17544B2RMP1F8VWG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 2.62e-23 | 3 |
extracellular matrix secreting cell | 1.13e-18 | 15 |
chondroblast | 2.74e-12 | 6 |
chondrocyte | 2.74e-12 | 6 |
stromal cell | 1.47e-10 | 28 |
cell of skeletal muscle | 1.12e-08 | 9 |
GAG secreting cell | 1.21e-08 | 9 |
carbohydrate secreting cell | 1.21e-08 | 9 |
secretory cell | 1.85e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 4.09e-23 | 3 |
skeletal tissue | 4.09e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 4.66e-66 | 1 |
extraosseous chondrosarcoma | 4.66e-66 | 1 |
myxoid chondrosarcoma | 4.66e-66 | 1 |
extraskeletal myxoid chondrosarcoma | 4.66e-66 | 1 |
connective tissue cancer | 2.74e-12 | 6 |
musculoskeletal system cancer | 2.74e-12 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.