FFCP PHASE1:Hg19::chr13:48611649..48611658,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55270|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23063|TSSclassifier=S|UniProt=Q9NV35|association_with_transcript=-44bp_to_ENST00000258662,NM_018283,uc001vbv.2,uc001vbw.1_5end|coexpression_cluster_id=C425|description=CAGE_peak_4_at_NUDT15_5end|id=chr13:48611649..48611658,+|ontology_enrichment_celltype=CL:0002322!5.27e-15!5;CL:0000039!9.69e-07!7;CL:0000586!9.69e-07!7|ontology_enrichment_celltype_v019=CL:0002322;1.99e-32;5!CL:0000039;1.61e-23;7!CL:0000586;1.61e-23;7!CL:0000148;8.13e-17;10!CL:0000147;2.51e-12;14!CL:0002321;1.42e-11;15!CL:0000710;6.17e-09;20!CL:0000540;5.54e-08;6!CL:0000404;5.54e-08;6!CL:0000075;7.24e-07;27|ontology_enrichment_celltype_v019_2=CL:0002322,2.34e-32,5;CL:0000039,1.44e-23,7;CL:0000586,1.44e-23,7;CL:0000148,8.81e-17,10;CL:0000541,8.81e-17,10;CL:0000147,2.66e-12,14;CL:0000710,6.42e-09,20;CL:0000540,5.54e-08,6;CL:0000031,5.54e-08,6;CL:0000404,5.54e-08,6;CL:0000075,7.45e-07,27|ontology_enrichment_development_v019=UBERON:0009117;8.13e-17;10!UBERON:0005564;8.13e-17;10!CL:0000031;5.54e-08;6|ontology_enrichment_disease=DOID:305!3.68e-10!106;DOID:0050687!4.63e-08!143;DOID:162!1.00e-07!235;DOID:14566!2.23e-07!239|ontology_enrichment_disease_v019=DOID:3095;3.26e-08;22!DOID:2994;3.26e-08;22|ontology_enrichment_disease_v019_2=DOID:3095,3.15e-08,22;DOID:2994,3.15e-08,22|ontology_enrichment_uberon=UBERON:0001737!3.11e-07!9;UBERON:0001052!8.32e-07!4|ontology_enrichment_uberon_v019=UBERON:0000473;9.92e-21;8!UBERON:0003135;2.17e-15;11!UBERON:0000922;4.12e-10;49!UBERON:0000991;1.48e-08;21!UBERON:0003101;3.26e-08;22!UBERON:0000079;3.26e-08;22|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.98e-21,8;UBERON:0003135,2.02e-15,11;UBERON:0000991,1.42e-08,21;UBERON:0009196,1.42e-08,21;UBERON:0009117,1.42e-08,21;UBERON:0005564,1.42e-08,21;UBERON:0004176,3.15e-08,22;UBERON:0003101,3.15e-08,22;UBERON:0000079,3.15e-08,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0.530119073285941,1.2781333715647,1.0366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.28853842595289,0,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0.141353071433941,0.432777279484182,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0.293977192243133,0.0870592065804026,0,0,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0.0846733320657845,0,0,2.73280352390533,0.550157746388935,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0,0.219881033490858,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504665699340316,0.546327859818478,0,1.73381010561369,1.06886962106224,0,0.752122617877125,0,0,0,0,0,0.23806443146374,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@NUDT15}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=55270 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23063 | |||
|TSSclassifier=S | |||
|UniProt=Q9NV35 | |||
|association_with_transcript=-44bp_to_ENST00000258662,NM_018283,uc001vbv.2,uc001vbw.1_5end | |||
|coexpression_cluster_id=C425 | |||
|description=CAGE_peak_4_at_NUDT15_5end | |||
|id=chr13:48611649..48611658,+ | |||
|ontology_enrichment_celltype=CL:0002322!5.27e-15!5;CL:0000039!9.69e-07!7;CL:0000586!9.69e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.99e-32;5!CL:0000039;1.61e-23;7!CL:0000586;1.61e-23;7!CL:0000148;8.13e-17;10!CL:0000147;2.51e-12;14!CL:0002321;1.42e-11;15!CL:0000710;6.17e-09;20!CL:0000540;5.54e-08;6!CL:0000404;5.54e-08;6!CL:0000075;7.24e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.34e-32,5;CL:0000039,1.44e-23,7;CL:0000586,1.44e-23,7;CL:0000148,8.81e-17,10;CL:0000541,8.81e-17,10;CL:0000147,2.66e-12,14;CL:0000710,6.42e-09,20;CL:0000540,5.54e-08,6;CL:0000031,5.54e-08,6;CL:0000404,5.54e-08,6;CL:0000075,7.45e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.13e-17;10!UBERON:0005564;8.13e-17;10!CL:0000031;5.54e-08;6 | |||
|ontology_enrichment_disease=DOID:305!3.68e-10!106;DOID:0050687!4.63e-08!143;DOID:162!1.00e-07!235;DOID:14566!2.23e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.26e-08;22!DOID:2994;3.26e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.15e-08,22;DOID:2994,3.15e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.11e-07!9;UBERON:0001052!8.32e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.92e-21;8!UBERON:0003135;2.17e-15;11!UBERON:0000922;4.12e-10;49!UBERON:0000991;1.48e-08;21!UBERON:0003101;3.26e-08;22!UBERON:0000079;3.26e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.98e-21,8;UBERON:0003135,2.02e-15,11;UBERON:0000991,1.42e-08,21;UBERON:0009196,1.42e-08,21;UBERON:0009117,1.42e-08,21;UBERON:0005564,1.42e-08,21;UBERON:0004176,3.15e-08,22;UBERON:0003101,3.15e-08,22;UBERON:0000079,3.15e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0.530119073285941,1.2781333715647,1.0366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.28853842595289,0,0.159426272728822,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0.141353071433941,0.432777279484182,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0.293977192243133,0.0870592065804026,0,0,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0.0846733320657845,0,0,2.73280352390533,0.550157746388935,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0,0.219881033490858,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504665699340316,0.546327859818478,0,1.73381010561369,1.06886962106224,0,0.752122617877125,0,0,0,0,0,0.23806443146374,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@NUDT15 | |||
}} |
Revision as of 02:26, 11 September 2013
Short description: | p4@NUDT15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_NUDT15_5end |
Coexpression cluster: | C425_iPS_HES3GFP_H9_teratocarcinoma_testicular_hepatocellular_Wilms |
Association with transcript: | -44bp_to_ENST00000258662, NM_018283, uc001vbv.2, uc001vbw.1_5end |
EntrezGene: | NUDT15 |
HGNC: | 23063 |
UniProt: | Q9NV35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.34e-32 | 5 |
germ line cell | 1.44e-23 | 7 |
germ cell | 1.44e-23 | 7 |
melanocyte | 8.81e-17 | 10 |
melanoblast | 8.81e-17 | 10 |
pigment cell | 2.66e-12 | 14 |
neurecto-epithelial cell | 6.42e-09 | 20 |
neuron | 5.54e-08 | 6 |
neuroblast | 5.54e-08 | 6 |
electrically signaling cell | 5.54e-08 | 6 |
columnar/cuboidal epithelial cell | 7.45e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
testis | 8.98e-21 | 8 |
male reproductive organ | 2.02e-15 | 11 |
gonad | 1.42e-08 | 21 |
indifferent external genitalia | 1.42e-08 | 21 |
indifferent gonad | 1.42e-08 | 21 |
gonad primordium | 1.42e-08 | 21 |
external genitalia | 3.15e-08 | 22 |
male organism | 3.15e-08 | 22 |
male reproductive system | 3.15e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.15e-08 | 22 |
germ cell cancer | 3.15e-08 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.