FFCP PHASE1:Hg19::chr13:96705608..96705619,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55757|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15664|TSSclassifier=S|UniProt=Q08AC9|association_with_transcript=-16bp_to_ENST00000376722_5end|description=CAGE_peak_2_at_UGGT2_5end|id=chr13:96705608..96705619,-|ontology_enrichment_celltype=CL:0000055!3.12e-09!180|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002331;4.89e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.46e-07,10;UBERON:0000358,2.46e-07,10;UBERON:0000307,2.46e-07,10;UBERON:0000091,2.46e-07,10;UBERON:0000087,2.46e-07,10;UBERON:0007010,2.46e-07,10;UBERON:0007806,2.46e-07,10;UBERON:0008780,2.46e-07,10;UBERON:0005728,2.46e-07,10|phase1_expression=1.09007027562334,0.214100523890983,1.12763523276777,1.0007329835313,0.446961094427288,0.872338524100369,0,0.631719873426831,0.522371256399677,0.491467873003018,0,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0.602694528023977,2.19093027116212,0.975865597581014,0.123121058076788,0.204000691244253,0.626909442956176,0.85870796139317,0.273748850145768,0.376627918784408,0.458480434487708,1.23150884174919,1.10195093839151,0,0,0,0,0,0,0.46480320348181,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0.726991193897824,0.755751887377619,0.242584061187816,0.697287110717054,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0.75374599577023,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.722878304769133,0,0.289693037921647,0.795285947051099,1.94653948121054,0.756278537312543,1.10864698731282,1.05401742831751,0.523916301990851,0,0,0.324547393654683,0,0.26591592103773,0,0,0,0.596287222100115,0,0,1.69592382577203,0.838998872419812,0.275118041940067,0.208994966536811,0.516833518338658,1.06729878806013,0.33472061276467,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.535798369704479,0.22452937262617,0.225222960966644,0,0.949265659568129,0.732806975721629,0,0,0,0,1.13967460498122,2.51577443545116,3.15520282823695,0.354668382198357,0.560677600142307,0,0.98667019366864,0.622422070799533,0.808264032418128,0.490385709340376,0.302714855289863,0.576175924479999,0,1.24864030732128,0.570471821544449,0.298897361103602,0.352303495931295,0.485618833104395,1.12360645361799,0,0.368502951935304,0,0,0.247266929278557,0,0.718618141816238,0.336672227908132,0.500474079487857,0.277064115484183,0.438977620880838,0.30648779579902,0.901428353439581,0.680593098960126,1.61450672119976,0,0.635795703478686,2.10063767259082,0.206105058476878,1.28820270022815,0.558350568994769,2.36286865137773,0.584622030967192,1.00973509697646,0.460249493211497,0.161646056818812,1.42003837006646,0.806016785821122,0,0.57978255948989,0,0.286804595389004,0.365921118388786,0.397589304964456,0.580969714347592,0.725627385107593,0.252320850875628,1.82488679537915,4.69348596989448,1.92972281457866,2.76269842704961,0.464367928031979,0,0.354920400119532,0,0.241011029883482,0.661763836394364,0.653638332277218,0.474541238222193,0.404493924480493,0.784885860501384,0,0,0,0.4115740113314,1.47008711385542,1.26755034821831,0,0,0,0.122988438543114,0.686271241194102,0,0,0,0.185176890317059,0,0,0,0.115930404975077,1.40890433082986,0.288732895522148,0,0.190254152234598,0,0,0,0.234004265139238,0.445893486866185,0,0.671928512795438,0.567100388969546,0.268675568108545,0.581267877027924,0,3.4486426652716,0.616339038092582,0.414656231081544,0.576479813667846,0,0.444485260045183,0.381988425558278,0,0,0.308482478109971,0,0.857479297891735,0.224262168690721,0.43596006883328,0.80672114403045,1.80980402060889,0,0,0.531876233169741,1.04007436911366,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0.65147236858747,0,0,0.602878754119172,1.74306691720059,0.899756920638513,0,0.502257091432126,0,1.67737398844108,1.14861935834114,0,1.59259437334337,0.821905290201534,1.61154866915906,0,0,0,0,0.508189248444927,0,0.773288812777695,0.335032530668698,0,0.749007023947182,0,0,0.24538298343828,0,0,0.207970861530807,0.535286966391485,0.473107245101804,0.468565659970853,0.300946099727719,0,2.0694614258501,0.664225598535437,0.553107505625109,0.260650843404249,0,0,0.413536052245775,0,0.106727557803444,0.303127571446259,0,0,2.23297027036899,1.99500565274481,0.841980283299221,1.66580894032411,1.53512174720011,0.965123526861645,0,0.925258162815933,0.887808626565635,0.574890092096664,1.03850885836724,0.464841513839837,0.604297247958111,0.40101294060657,0,0.34444334449382,0.546273504020151,0.3933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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55757 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15664 | |||
|TSSclassifier=S | |||
|UniProt=Q08AC9 | |||
|association_with_transcript=-16bp_to_ENST00000376722_5end | |||
|description=CAGE_peak_2_at_UGGT2_5end | |||
|id=chr13:96705608..96705619,- | |||
|ontology_enrichment_celltype=CL:0000055!3.12e-09!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.89e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.46e-07,10;UBERON:0000358,2.46e-07,10;UBERON:0000307,2.46e-07,10;UBERON:0000091,2.46e-07,10;UBERON:0000087,2.46e-07,10;UBERON:0007010,2.46e-07,10;UBERON:0007806,2.46e-07,10;UBERON:0008780,2.46e-07,10;UBERON:0005728,2.46e-07,10 | |||
|phase1_expression=1.09007027562334,0.214100523890983,1.12763523276777,1.0007329835313,0.446961094427288,0.872338524100369,0,0.631719873426831,0.522371256399677,0.491467873003018,0,0,0.263766978228454,0.123766352960047,0,0.672325146451775,0.602694528023977,2.19093027116212,0.975865597581014,0.123121058076788,0.204000691244253,0.626909442956176,0.85870796139317,0.273748850145768,0.376627918784408,0.458480434487708,1.23150884174919,1.10195093839151,0,0,0,0,0,0,0.46480320348181,0,0.293600439334847,0,0,0.217010870715852,0,0,0,0.726991193897824,0.755751887377619,0.242584061187816,0.697287110717054,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0.75374599577023,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.722878304769133,0,0.289693037921647,0.795285947051099,1.94653948121054,0.756278537312543,1.10864698731282,1.05401742831751,0.523916301990851,0,0,0.324547393654683,0,0.26591592103773,0,0,0,0.596287222100115,0,0,1.69592382577203,0.838998872419812,0.275118041940067,0.208994966536811,0.516833518338658,1.06729878806013,0.33472061276467,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.535798369704479,0.22452937262617,0.225222960966644,0,0.949265659568129,0.732806975721629,0,0,0,0,1.13967460498122,2.51577443545116,3.15520282823695,0.354668382198357,0.560677600142307,0,0.98667019366864,0.622422070799533,0.808264032418128,0.490385709340376,0.302714855289863,0.576175924479999,0,1.24864030732128,0.570471821544449,0.298897361103602,0.352303495931295,0.485618833104395,1.12360645361799,0,0.368502951935304,0,0,0.247266929278557,0,0.718618141816238,0.336672227908132,0.500474079487857,0.277064115484183,0.438977620880838,0.30648779579902,0.901428353439581,0.680593098960126,1.61450672119976,0,0.635795703478686,2.10063767259082,0.206105058476878,1.28820270022815,0.558350568994769,2.36286865137773,0.584622030967192,1.00973509697646,0.460249493211497,0.161646056818812,1.42003837006646,0.806016785821122,0,0.57978255948989,0,0.286804595389004,0.365921118388786,0.397589304964456,0.580969714347592,0.725627385107593,0.252320850875628,1.82488679537915,4.69348596989448,1.92972281457866,2.76269842704961,0.464367928031979,0,0.354920400119532,0,0.241011029883482,0.661763836394364,0.653638332277218,0.474541238222193,0.404493924480493,0.784885860501384,0,0,0,0.4115740113314,1.47008711385542,1.26755034821831,0,0,0,0.122988438543114,0.686271241194102,0,0,0,0.185176890317059,0,0,0,0.115930404975077,1.40890433082986,0.288732895522148,0,0.190254152234598,0,0,0,0.234004265139238,0.445893486866185,0,0.671928512795438,0.567100388969546,0.268675568108545,0.581267877027924,0,3.4486426652716,0.616339038092582,0.414656231081544,0.576479813667846,0,0.444485260045183,0.381988425558278,0,0,0.308482478109971,0,0.857479297891735,0.224262168690721,0.43596006883328,0.80672114403045,1.80980402060889,0,0,0.531876233169741,1.04007436911366,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0,0.65147236858747,0,0,0.602878754119172,1.74306691720059,0.899756920638513,0,0.502257091432126,0,1.67737398844108,1.14861935834114,0,1.59259437334337,0.821905290201534,1.61154866915906,0,0,0,0,0.508189248444927,0,0.773288812777695,0.335032530668698,0,0.749007023947182,0,0,0.24538298343828,0,0,0.207970861530807,0.535286966391485,0.473107245101804,0.468565659970853,0.300946099727719,0,2.0694614258501,0.664225598535437,0.553107505625109,0.260650843404249,0,0,0.413536052245775,0,0.106727557803444,0.303127571446259,0,0,2.23297027036899,1.99500565274481,0.841980283299221,1.66580894032411,1.53512174720011,0.965123526861645,0,0.925258162815933,0.887808626565635,0.574890092096664,1.03850885836724,0.464841513839837,0.604297247958111,0.40101294060657,0,0.34444334449382,0.546273504020151,0.393373244878272,0,0.231046011313244,1.56869953835371,1.46139224653261,0.211103257785751,0,0.170093705276516,0.431831832204279,0,0,0,0.254876273045038,0,0.447749509444357,0,0.261435451024901,0.512900250232778,0,0,0.206082023295445,2.1060976908219,1.48517099857058,0,0,1.6068392984416,0.48335359146061,0.462145851343933,0.460511024178389,1.24052915236078,0.966782203814463,0.290033387828457,0.511359764496605,0.445160178233687,1.15699440752685,1.15314040419064,1.40373983744043,0.30347334256665,0,4.40737285562896,1.3940745403212,0.924100740528266,0.532306030317022,0,0.9266210955196,1.71749864090389,0.744316738719335,1.2655176988749,0.953150969619124,0,0,0.318203247925937,0,0.539617372749944,0.274537029736055,0.824686816419805,0.202182481573316,3.17020642346017,1.68503382495592,0,0.487426979262569,2.11300293513511,0.9554993798559,0.565621727814851,0,2.2054613741845,0.66343897524122,0,0,0,0.608731130888112,0.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| |||
|short_description=p2@UGGT2 | |||
}} |
Revision as of 03:01, 11 September 2013
Short description: | p2@UGGT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_UGGT2_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENST00000376722_5end |
EntrezGene: | UGGT2 |
HGNC: | 15664 |
UniProt: | Q08AC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.46e-07 | 10 |
blastocyst | 2.46e-07 | 10 |
blastula | 2.46e-07 | 10 |
bilaminar disc | 2.46e-07 | 10 |
inner cell mass | 2.46e-07 | 10 |
cleaving embryo | 2.46e-07 | 10 |
connecting stalk | 2.46e-07 | 10 |
inner cell mass derived epiblast | 2.46e-07 | 10 |
extraembryonic mesoderm | 2.46e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.