FFCP PHASE1:Hg19::chr13:99960187..99960197,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=337867|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20486|TSSclassifier=S|UniProt=|association_with_transcript=-8bp_to_ENST00000473194_5end|coexpression_cluster_id=C74|description=CAGE_peak_19_at_UBAC2_5end|id=chr13:99960187..99960197,+|ontology_enrichment_celltype=CL:0000738!2.24e-27!140;CL:0000988!3.65e-27!182;CL:0000037!5.82e-24!172;CL:0000566!5.82e-24!172;CL:0002032!1.06e-23!165;CL:0000837!1.06e-23!165;CL:0002087!6.12e-23!119;CL:0002031!8.31e-22!124;CL:0002057!7.88e-20!42;CL:0000860!2.84e-18!45;CL:0000990!3.60e-17!8;CL:0002009!5.74e-17!65;CL:0000763!2.74e-16!112;CL:0000049!2.74e-16!112;CL:0002194!1.37e-15!63;CL:0000576!1.37e-15!63;CL:0000040!1.37e-15!63;CL:0000559!1.37e-15!63;CL:0000557!3.39e-15!71;CL:0000453!1.80e-14!5;CL:0000766!5.33e-14!76;CL:0000451!6.27e-14!10;CL:0000839!1.17e-13!70;CL:0000080!1.73e-11!6;CL:0000134!7.30e-09!358;CL:0002320!1.55e-08!365;CL:0000838!1.82e-07!52;CL:0000219!2.21e-07!390;CL:0000542!2.75e-07!53;CL:0000051!2.75e-07!53;CL:0000840!5.48e-07!5;CL:0001029!5.48e-07!5|ontology_enrichment_celltype_v019=CL:0000453;1.99e-32;5!CL:0000990;1.48e-18;8!CL:0000451;2.17e-15;10!CL:0002552;3.10e-09;5|ontology_enrichment_celltype_v019_2=CL:0000453,2.34e-32,5;CL:0000990,1.61e-18,8;CL:0000451,2.33e-15,10;CL:0002552,2.74e-09,5|ontology_enrichment_development_v019=UBERON:0004872;5.08e-07;7|ontology_enrichment_disease=DOID:0060058!7.15e-07!10|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.92e-18!102;UBERON:0003061!2.92e-18!102;UBERON:0002193!3.90e-16!112;UBERON:0002371!4.89e-13!80;UBERON:0001474!7.53e-12!86;UBERON:0002405!4.05e-10!115;UBERON:0004765!1.67e-09!101;UBERON:0001434!1.67e-09!101;UBERON:0002384!4.34e-08!375|ontology_enrichment_uberon_v019=UBERON:0002106;1.22e-14;3!UBERON:0004177;2.53e-09;5!UBERON:0005057;2.53e-09;5|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.22e-14,3;UBERON:0004854,1.22e-14,3;UBERON:0009034,1.22e-14,3;UBERON:0002095,1.22e-14,3;UBERON:0004782,1.22e-14,3;UBERON:0003281,1.22e-14,3;UBERON:0009664,1.22e-14,3;UBERON:0002296,1.22e-14,3;UBERON:0005602,1.22e-14,3;UBERON:0001179,1.22e-14,3;UBERON:0006293,1.22e-14,3;UBERON:0004177,5.08e-07,7;UBERON:0005057,5.08e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.236132343941038,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0.232429036905685,0,0,0.575384784644301,0,0.47296445977717,0.344745680736619,0.645484683583826,0,0.376484679085209,0,0,0.612167784741805,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0,0,1.10483290796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0.324547393654683,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0.522109747527277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16916185303633,1.0629187225069,0.327130788511688,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,4.59729317254673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699|short_description=p19@UBAC2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=337867 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20486 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-8bp_to_ENST00000473194_5end | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_19_at_UBAC2_5end | |||
|id=chr13:99960187..99960197,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.24e-27!140;CL:0000988!3.65e-27!182;CL:0000037!5.82e-24!172;CL:0000566!5.82e-24!172;CL:0002032!1.06e-23!165;CL:0000837!1.06e-23!165;CL:0002087!6.12e-23!119;CL:0002031!8.31e-22!124;CL:0002057!7.88e-20!42;CL:0000860!2.84e-18!45;CL:0000990!3.60e-17!8;CL:0002009!5.74e-17!65;CL:0000763!2.74e-16!112;CL:0000049!2.74e-16!112;CL:0002194!1.37e-15!63;CL:0000576!1.37e-15!63;CL:0000040!1.37e-15!63;CL:0000559!1.37e-15!63;CL:0000557!3.39e-15!71;CL:0000453!1.80e-14!5;CL:0000766!5.33e-14!76;CL:0000451!6.27e-14!10;CL:0000839!1.17e-13!70;CL:0000080!1.73e-11!6;CL:0000134!7.30e-09!358;CL:0002320!1.55e-08!365;CL:0000838!1.82e-07!52;CL:0000219!2.21e-07!390;CL:0000542!2.75e-07!53;CL:0000051!2.75e-07!53;CL:0000840!5.48e-07!5;CL:0001029!5.48e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000453;1.99e-32;5!CL:0000990;1.48e-18;8!CL:0000451;2.17e-15;10!CL:0002552;3.10e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,2.34e-32,5;CL:0000990,1.61e-18,8;CL:0000451,2.33e-15,10;CL:0002552,2.74e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0004872;5.08e-07;7 | |||
|ontology_enrichment_disease=DOID:0060058!7.15e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.92e-18!102;UBERON:0003061!2.92e-18!102;UBERON:0002193!3.90e-16!112;UBERON:0002371!4.89e-13!80;UBERON:0001474!7.53e-12!86;UBERON:0002405!4.05e-10!115;UBERON:0004765!1.67e-09!101;UBERON:0001434!1.67e-09!101;UBERON:0002384!4.34e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.22e-14;3!UBERON:0004177;2.53e-09;5!UBERON:0005057;2.53e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.22e-14,3;UBERON:0004854,1.22e-14,3;UBERON:0009034,1.22e-14,3;UBERON:0002095,1.22e-14,3;UBERON:0004782,1.22e-14,3;UBERON:0003281,1.22e-14,3;UBERON:0009664,1.22e-14,3;UBERON:0002296,1.22e-14,3;UBERON:0005602,1.22e-14,3;UBERON:0001179,1.22e-14,3;UBERON:0006293,1.22e-14,3;UBERON:0004177,5.08e-07,7;UBERON:0005057,5.08e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.236132343941038,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0.232429036905685,0,0,0.575384784644301,0,0.47296445977717,0.344745680736619,0.645484683583826,0,0.376484679085209,0,0,0.612167784741805,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0,0,1.10483290796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0.324547393654683,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0.522109747527277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16916185303633,1.0629187225069,0.327130788511688,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,4.59729317254673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |||
|short_description=p19@UBAC2 | |||
}} |
Revision as of 03:07, 11 September 2013
Short description: | p19@UBAC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_UBAC2_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | -8bp_to_ENST00000473194_5end |
EntrezGene: | UBAC2 |
HGNC: | 20486 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 2.34e-32 | 5 |
conventional dendritic cell | 1.61e-18 | 8 |
dendritic cell | 2.33e-15 | 10 |
fibroblast of gingiva | 2.74e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.22e-14 | 3 |
gastrointestinal system mesentery | 1.22e-14 | 3 |
stomach region | 1.22e-14 | 3 |
mesentery | 1.22e-14 | 3 |
gastrointestinal system serosa | 1.22e-14 | 3 |
mesentery of stomach | 1.22e-14 | 3 |
gut mesentery | 1.22e-14 | 3 |
dorsal mesentery | 1.22e-14 | 3 |
dorsal mesogastrium | 1.22e-14 | 3 |
peritoneal cavity | 1.22e-14 | 3 |
spleen primordium | 1.22e-14 | 3 |
hemopoietic organ | 5.08e-07 | 7 |
immune organ | 5.08e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.